Array 1 3476-3134 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBJJ010000538.1 Pyxidicoccus fallax strain DSM 14698 NODE_538_length_5633_cov_31.4301, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================== ================== 3475 30 100.0 32 .............................. GTCGCAGGCGTCGTGAGGGGGGCGGGCACGGG 3413 30 93.3 31 ...................GT......... TTGCTTGCGTCGCGATGGGCGCGTCAGCAGA 3352 30 100.0 33 .............................. GTTGCAGGCGTCGCGAGAGGAGCGGGTAACGGA 3289 30 90.0 32 ...............T.A.G.......... GGTGATTGCATCACGAGAGGAGCAGGCAGCGG 3227 30 83.3 34 AG....T........A...G.......... GGTGCCTGCGTCATGAGAGGCCAGGCCGCGCAAG 3163 30 83.3 0 .......G....T.....GA.C........ | ========== ====== ====== ====== ============================== ================================== ================== 6 30 91.6 33 GCCCGCCCTCGACTCGCGTCAGCAGAGTGG # Left flank : CCGGCCGTAGCACCGGCTGCCGCGAAGAAGGGGGCTGTGGGAGCTCCGGCGGCACCGGCCGCCGCGAAGAAGGGGGCTGCGGGGACTCCGACGGCACCGACTGCAGCGAAGAAGGCCGCGAAGCCTGCTGCTCCCGCGCCCGCCGCGAAGAAGGCAGCTGCGAAGAAGGCTCCGGCGAAGACTGCCCTGGTTGCGAAGAAGGCTCCGGCGAAGAAGGCCGCCGCGAAGAAGGCACCCGCCACGAAGGCTGCCGCCAAGAAGGGTGCGGTTGCGAAGAAGGCACCCGCGGCGAAGAAGGCTGCCGCGAAGGTCCCAGCGAAGAAGGCACCCGCGGCGAAGAAGGCTGCCGCGAAGGCCCCAGCGAAGAAGGCCGCCGCGAAGAAGGCACCAGCGGGGGGCGGAGCCGCGAAGAAGGCGGCTGCGAAGAAGGCGCCCGCGAAAAAGGCCGCCGCGAAGAAGCGCGGTCGCTGAGCATGAGCGGGAGAGGAGCGGGCCATGGG # Right flank : GGCCTTACCTCGTGTGAGGTTGGGTAGCGCAAGCCCACGCAGCCCCGGCTCGTGCATCCATCGCGAGCCGCCTCCGTGGCGAGAGGTCGGGAGTCACACTCCCGCCCCGTCTCGGCTCACGGAGCCTCTTCCGCGCGACAGGCAGGGGATGACCCCCGTGGCCCGGTCTCGCGCTCCAGTGCCGCGAGAGTCGGGCGGCACTTCATCACCGCCCGACTTCACCCCTGAACCGGAAGGCTACCCCTCCGGAAGCTGGTCGCGGCGGATGGGGCGGATGCGGTCCTCCGGCTGGGCCGTCAGCTCCGCGCCCTCTTCTTCCTCGTCGCCCCGGCGGAACTCGTGAATCTGGTCCGGCAGGATGTCGCGGAAGTCCGGCTCATCCTCCAGCGGCGGAGTCGCCGCCAGGTCCTGGTCGGTGATGTTGATTTCCTCCTCACCGGTGTCCGGATTCAGGTGGCGCAGAGAGGTGGACTCACCCACGTCCTCTGAACCGAGCTTCT # Questionable array : NO Score: 2.54 # Score Detail : 1:0, 2:0, 3:0, 4:0.59, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCCGCCCTCGACTCGCGTCAGCAGAGTGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.60,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 1 1386-1547 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBJJ010000691.1 Pyxidicoccus fallax strain DSM 14698 NODE_691_length_1572_cov_33.7128, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ================================================ ================== 1386 23 100.0 45 ....................... AGACACCGCACGACGGGCCGCCGCTCCCGCTTTCAGGGGCGTCAG 1454 23 100.0 48 ....................... GTACCCGGCTCCTCCGGCCCCAAGCCCTCCGCCCTGTCCGGACGCCAC 1525 23 100.0 0 ....................... | ========== ====== ====== ====== ======================= ================================================ ================== 3 23 100.0 47 GTGGAAGGAACGTTCATTCCACG # Left flank : GTCGCGGCTGGAGGAGCGGGGCATCCTCGGCCTGGGCAGCGGGCGCAACGCGGACGCGGTGCTGCTGGCCGCCGCGCCCACCGTGTACGGCGGTGGCTACTCGGTGCCGCTGCCCGCGCAGCTGCTCACTGGCCGCATCGTCCGCTTCGCCACCTGGGTGAGGGACCAGCTCCCGCCCGGCTCCGGCAACGACGAGGTCTCCGCCATCTTCTCCCAGGCCGCCGAGGTCTTCCTCTTCCGCGGCGCCACGGAGAATGGCCAGGTGCGCGCCGAGCTCGTCTCCACCGGCGACGGCCGCGGCGTCCAGGTCAGCGCCACCGTCCGCCCGGAGCACGCCGGCACGCGCTTCCAGCTCGGCTTCGTCCTGCCCCTGCGAGGCTGAGCAGCGCCTGCGCTTCCAGCCCGGCTCCGTGCTGTCCCCGGAGCCGGGTGCTGTAGAGCACCGGGCCCACGGCCCGAGCGCGACTTCCCGTGAGGCCGCCCGTCCTGGCCGGTGCCTC # Right flank : TTGCCGGGCTCGACCCTTCCCGCCC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGAAGGAACGTTCATTCCACG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [20.0-10.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 1 7623-7805 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBJJ010000086.1 Pyxidicoccus fallax strain DSM 14698 NODE_86_length_39420_cov_34.2929, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================== ================== 7623 24 100.0 29 ........................ GGGTGGACGCCGCCCAGGACCAGCACGCC 7676 24 95.8 30 ...T.................... AAGAAGAGGCGACCCGAGGGTCAGCAAGCC 7730 24 87.5 27 .G..T..............G.... GGAAGGGGGCCCCGGGGCCAGCGGTGT T [7734] 7782 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ============================== ================== 4 24 95.8 29 CAGGCGGAATGGAGCTTCCATTCC # Left flank : CACGCACCGCGGTCCGTGAAGGGCTATGAAACCCTGCCCTTCATCACCTACGACGAATGCGAGTACGTGTTCGGCCGGTGGTTCGACGCGCACTTCGGGACGCAGCCCGCGGGGATGCGCGAGGTGTGCCACTTCGAGGAACTGGAGGAGGTGCTGGAGACCGTGGCGCTGGGCCGGGGCGTGTCCGTGATTCCGGACCACGTGGCGGCCCAGGCCGTCCAACAAGGGCGCGTGAAGCTGCTGCGCCCCACGTCACGCCGGGCGACCAACGCCATCTACTCGGTGACGCGGGCGGGCGCCGCGCACCACCCGGACGTGGAGCGGCTCATCGAGGCGCTGCGAGCGGAACGCCCCACTCCGAGTGCCCCGAAGAAGACGTCAGTGGGTACCAGGCCCTCGAGCCGTTCCCGAGGAACCTCGGGCCGACGGAGGGCATGAGCAACAAACGCATCGGGCTCCACCGGGTGGACGGAGGACCCCGACTCCGCAGCTGACTGCTC # Right flank : CGACAGGAGCGCCCGGGAGCGGGCCTCCGCCCCCCTGTTCATGCTGTGCCGAGGTGCCTCCTCGGCGGGACTCATCCGCGTCCTGAATCAGCCCACGGCACGCGGCGCCACCTGCGACGGCGGAGCCCACTTGGAGTCGAGCTGATGGATGGTCGGAACCGGGATGCCCAGCAGGAACATGTAGTAGAGCGCCCGGTGCTGGTCGTTGACCTCCTGCTCGAACGGGAGAATCCACCCGGTGGAGTAGAGCTGGCCTTTGAGGCTCGTGCTCGCGCTCGGCTGCGTGTACGTCAGGTCGTTGCTCTGGAGGGTGTCCAGGGCCCACTTCACCGCGCCCTTCACGACGGGGCCCGCCTGCGGTCCTCCGGCGTAGTCGGAGTCGATGGACGTCAGGCCCTCCACCGTCCACAGGCAGGGGACCACATCCAGCGTGTTGTAGTACCGCATGGCGCCCGCGGCGTTGAACGTCGAGTCGAAGGACGCAGCAAAGGCCGGGTTGC # Questionable array : NO Score: 2.60 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:-0.04, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGGCGGAATGGAGCTTCCATTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.30,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-25.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //