Array 1 1156406-1163811 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR698977.1 Campylobacter hyointestinalis isolate MGYG-HGUT-02307 chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1156406 30 100.0 35 .............................. TTATCTGTCCGCTATTCTTGTCCGTTTTAAATTTA 1156471 30 100.0 35 .............................. CTTTCAACTACTTTGATTAAACCTTGAACATTTGT 1156536 30 100.0 36 .............................. GTTAATGTTGTGCTTGGTTTTTAACTGCTCTTTGTG 1156602 30 100.0 36 .............................. AGTTGTTATTTGATTTGTCATTTTTTATCCTTTTTT 1156668 30 100.0 37 .............................. TTAAAATTTTAGCTCTCATAGCGTTATGATTTTTTGC 1156735 30 100.0 36 .............................. TATCCTCCATCTCCTCTTTTGTTTTTAATCCAAATT 1156801 30 100.0 36 .............................. TATCAAAAATGAGCAGGATTGCACAAAAAGAAATCA 1156867 30 100.0 37 .............................. AATGATAATTTTGATTATGAAATTATCGAAGTAGAGG 1156934 30 100.0 36 .............................. GTTAATGTTGTGCTTGGTTTTTAACTGCTCTTTGTG 1157000 30 100.0 38 .............................. GGTTGCTGAAAACTTGACCACCTGCTTAAATAAGAGCG 1157068 30 100.0 36 .............................. CGCACCGAAAAAATTAAATCAATATCAAAAAGATAG 1157134 30 100.0 35 .............................. AATATACCTTTATAGCGCTCTCTCCGCCTATTTGA 1157199 30 100.0 33 .............................. AGATATCTATGCAAACCATAGGGGGATTTTAAC 1157262 30 100.0 34 .............................. AGCAAGAGATAGATGAAGCGTGGGCGAGGCTTAG 1157326 30 100.0 38 .............................. CAAAAATACATAAAGCCCATAGGGTAAGCATAATAAAA 1157394 30 100.0 37 .............................. ACAGAGGTAAAAAGAGACGACGAGGCTATTCAAAAGC 1157461 30 100.0 36 .............................. CAAAGATAAACAAAACCAAATCTACGCTTATGATGA 1157527 30 100.0 39 .............................. GGGCTAGTATATACTTTGGCTTTATATCGAAAAATATCG 1157596 30 100.0 35 .............................. CGGCAAACAAAAATGCATAGTAGCCTACGACTCTA 1157661 30 100.0 33 .............................. TTATTACACTTTCAAGCTCATCAGCAAGGTTAA 1157724 30 100.0 35 .............................. TATATGATGCTCTTTTTATTTGCACCACTCTTTAC 1157789 30 100.0 34 .............................. TGAATATACCAAAGGGCTTTCAAACAAACGGGGC 1157853 30 100.0 37 .............................. CATTTTTTACCCTAAGATATTTTTTCGCAAAACTCTA 1157920 30 100.0 35 .............................. ATCAATTTTTCTAGGGAAGAGGTAGAGCTATTCGA 1157985 30 100.0 36 .............................. TACACCTGTTATTGCTGAGCTTCCTATAATGGACTT 1158051 30 100.0 34 .............................. GCTAGCTTATTTTCTACAAAGACGCTCATTTTGG 1158115 30 100.0 36 .............................. AATAAAGCGTTACTTTTCTAGCATATCAATCAAAAA 1158181 30 100.0 35 .............................. TTTAGAATGCGTCTGTGCAGAGAATAGCATAACGC 1158246 30 100.0 37 .............................. CAAGCCTTTTATTGTATATTTCATATTTTTCTTCGGA 1158313 30 100.0 35 .............................. GTTATGCTTGAAACAATACCCGGAAGCCAATTTTG 1158378 30 100.0 34 .............................. AAAGCCAAACCACGTTTTTAAGGCTATTTAAACA 1158442 30 100.0 37 .............................. GAATTATTCGGTTCTTTTGGTTTTGAAGCAATAGAGC 1158509 30 100.0 34 .............................. TTAGGGTATTTGTTAGCTCGTCTGTTTTAGTGTT 1158573 30 100.0 36 .............................. CAAACCAAAGGTCACTCCACTACCAACAAAAACACC 1158639 30 100.0 36 .............................. TCAACGCCGACAAAAAACATAGGGTCGCCATACTTA 1158705 30 100.0 36 .............................. TCATACAAAAAACAACTCATCTAAATTTAAAAAGAA 1158771 30 100.0 36 .............................. TCAAAAAAGGAATGAGCGTAGCGGAATTTTTAAATT 1158837 30 100.0 34 .............................. TGCCTGTTATATCATTAGCAAAACTTATATTTGA 1158901 30 100.0 35 .............................. GCTCCCTCTTTATTTTTTTCATCTCTTTTTTTAGC 1158966 30 100.0 35 .............................. GCGTTTAGGATTTACAAGAGGTTGTGCAAATTACG 1159031 30 100.0 34 .............................. ACTGGGTGCTTAGTAGATATGACCTGAATGAGTT 1159095 30 100.0 36 .............................. TAATTCCAAAATAGAGAGCCTATATCCACAAGCTAG 1159161 30 100.0 34 .............................. TACGAGAACGAGGAGCTATTAGTAGGAGAGATGA 1159225 30 100.0 35 .............................. GACCCAGCCAAATAAACAACGATAGAACTCTCAGA 1159290 30 100.0 37 .............................. AAAGTTTCAATGCTCATTTTTAATCCTTTTTTGATAA 1159357 30 100.0 34 .............................. TTAATTGATGATTTTTATTTTCTTTGTGAAATCT 1159421 30 100.0 34 .............................. TTTTGCTGATTTGTTAGACTTCCCCTTGAACTTC 1159485 30 100.0 35 .............................. CTTTTGGTTATGGAGAAAAAGAGGGAAAAGAGGTT 1159550 30 100.0 35 .............................. ATGGAAATGTTAGATAATAAAAACGTCACAACAAA 1159615 30 100.0 35 .............................. ATTTCTATTTTGTAGGTCATATGTGATTTTTGATA 1159680 30 100.0 37 .............................. GCAAGATAGATAGCTTAAATGATGAGCTTAAAGCGTA 1159747 30 100.0 35 .............................. AGCGGTTGGGAGCATTTTCAATTTTCTAGCTTTGA 1159812 30 100.0 35 .............................. GAAATCATCAAAACAACGCAAGATGAGTTCAAGAT 1159877 30 100.0 36 .............................. ATAGCACTGTCTAAGCCGTTCATTTTAGATTTTAAG 1159943 30 100.0 35 .............................. TTATTTCAAATTTAGCCGATTTTTATTTGATAGTG 1160008 30 100.0 36 .............................. GATACTGTCTTGAATTTCACGTGTGCAAAGTATCCT 1160074 30 100.0 34 .............................. TTTACTTCATAAATGCTACTTAAGCATTCGTTAA 1160138 30 100.0 35 .............................. ATTCGGCGGATACCAATACAGAAGTTGCGAGGACA 1160203 30 100.0 34 .............................. AAAAATCACGCTAGGCTTAACTTCAGCGTTATAG 1160267 30 100.0 36 .............................. CAATGGCGATAGAAATGCGATAGAAACAAGAGCCAA 1160333 30 100.0 34 .............................. CTAAATAGACCAAAAGAGCCAAGCCTTGATGAGC 1160397 30 100.0 34 .............................. TCACAAAAATATTTTAAGAGAAAAGACACTCAAG 1160461 30 100.0 35 .............................. TTAGCAGGTATGCCTATCATTCCTTTATCGATGAT 1160526 30 100.0 34 .............................. GATGAGTTTCTTATATCGTTGTTATCAAAAAAAT 1160590 30 100.0 35 .............................. GTCAGCTCCAACCATATGCAAAATATTACCATTTA 1160655 30 100.0 35 .............................. CTTGCGCGACTAGAAATGAAAAAATCACCAAAACC 1160720 30 100.0 34 .............................. GTTGTGTATCAGTTTTTAAATTATTTTTCAAAGG 1160784 30 100.0 34 .............................. TTTAAAAAAAAGCGTTTGTTATATTTGCTTGAAA 1160848 30 100.0 34 .............................. ATGATCATATACGCCAAAAATCGCTAACTGGCTA 1160912 30 100.0 36 .............................. CTATCGTTACTTCATCTCTTTTTACTTCTATGTCAA 1160978 30 100.0 35 .............................. ACAAAAAAAGCTTTTAGACGAAAAGATAGAGGAGC 1161043 30 100.0 36 .............................. TAATACAATTGGCGAGTTTTGGGATGATAGCGTTCG 1161109 30 100.0 36 .............................. CTCAGACGGTGTTTCAGTTTCTGCAGGTGGGGAAGG 1161175 30 100.0 35 .............................. ATACGCCAACTAAAGCCAAAGCTAGGGCTAAAAAG 1161240 30 100.0 39 .............................. GGTCATTTAATAATCCATATGTTTTATTATTACCATTAT 1161309 30 100.0 34 .............................. CATTTCATAGTCTTTTTTTACATTTTCCCAAAAA 1161373 30 100.0 34 .............................. TCAAGCCAAAGTATATCAAGGGCGAACCTCTTCA 1161437 30 100.0 35 .............................. TCCTCTTAAAATATTTTTCTGTTTTGGTTTGTGGA 1161502 30 100.0 34 .............................. TAGCTTTGATATAATATCTATCGCCGATTATCAC 1161566 30 100.0 36 .............................. TCTATCATTTTTTAGCTCTCTATCAAACACAAAATA 1161632 30 100.0 37 .............................. ATTTGTCAGAGGCTACAAGCTTAAGCGACGTAGCGAG 1161699 30 100.0 35 .............................. TAGGGTCATTCGCAAAACCCCAGTCTGCCCCAAAA 1161764 30 100.0 36 .............................. TTTGGGAGGGCGAACTTAGAAAAAACACAAACGAGC 1161830 30 100.0 37 .............................. CGAATTTAACTTGCGTTTTATCCGCTTTGCCATTAAA 1161897 30 100.0 33 .............................. AGTTTGATAGACCTAAAATAGTGCAAATTCAAA 1161960 30 100.0 35 .............................. TTTAGCTAAAACTTCGCGGTTGCTTGGTGAAAATA 1162025 30 100.0 36 .............................. TAAATCTTGGGGCTCAATCTACATTCGGAGCAGAAG 1162091 30 100.0 33 .............................. CAAAGCCTACTTAAAGCTAAATATTGCTGTCCG 1162154 30 100.0 35 .............................. GCTGTCTACCGTTTCAGACTTTGTCTCTTGTTCTT 1162219 30 100.0 34 .............................. ATTATGAAGCATTCACAAAAACTGACCTTCGCTA 1162283 30 100.0 35 .............................. CTTCTACCAAAAAGAGCCTTCAAAGATTGAAGTGG 1162348 30 100.0 36 .............................. TTAATCCAAATTTAACTTCAGAGAAAAACTCAGATA 1162414 30 100.0 35 .............................. AAGCGGATTAATTAAAGGGAGGTTAAGAACCATAA 1162479 30 100.0 36 .............................. AATTGCTTTGTGTGGCGTGTAGCCTTTTGCAGTGGC 1162545 30 100.0 36 .............................. ATATCTTCTATGGTATAGAAAAACATTTTACTATCG 1162611 30 100.0 34 .............................. TTGGTATAGCCGACAGTTGTATCGGTTTCCTTGA 1162675 30 100.0 36 .............................. TCTCTTGAAAATTTGTTTTATTTTTTTCATCATTTA 1162741 30 100.0 37 .............................. AGCTTTAATATTCAAATAGAAAATATCACGTATGAAA 1162808 30 100.0 37 .............................. TTTTGTTTTAGCCAAATAGCGAAGTCTTGAACTTTTG 1162875 30 100.0 35 .............................. AGCCGACCAAAAAATAGAAGTTCCAAAAGAGTATG 1162940 30 100.0 34 .............................. GTATTTAAAGGGACGTAGGCATAAAGCAAAGCTA 1163004 30 100.0 36 .............................. CGATATAATCTTTGTTATATCTTCTTATAATCTCAA 1163070 30 100.0 36 .............................. CGTCAGCTGTTTCACTAGCGTTAAACTTCGTTTTTC 1163136 30 100.0 34 .............................. CTGGGCGTGAGTTTGGCTTTGCGCCATATGGCAA 1163200 30 100.0 35 .............................. TCGCTTTGTAGTCTTTGTAGGCTTTGTAACCTTTG 1163265 30 100.0 34 .............................. TTTTTTATCCTTATTTGATTTGGTTTTATTTATT 1163329 30 100.0 35 .............................. ACCGATAGCGTATATCAAGAGGTAGAACAAGAGTA 1163394 30 100.0 35 .............................. TTGATTACCACCTGCAATATTGCCACTATTGTTTA 1163459 30 100.0 34 .............................. TTTCTACAAGTTCTTTGCCTTTACTTGTTAGCTC 1163523 30 100.0 36 .............................. TTAAAAATTGAGTTGAAAAGCTAGGCTTATCTCGTA 1163589 30 100.0 34 .............................. CCAACGCTTGTCAAGCCGTCAATTATCAAAGGTC 1163653 30 100.0 35 .............................. GGTAGGTAAATTTATAAATCCGCAAACTCACGGAC 1163718 30 100.0 34 .............................. TTAGCTGTGCCTCTACTTCTTTACGCCCTTGCTG 1163782 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 114 30 100.0 35 GTTTCAAATCCTAAAAGGATAAATTTATAC # Left flank : GCTATTGGCTCAAGTATAGTTTTATAAATGCTTTCCATATGGTTATTATAATATAAAAAAGTAAGCTCCAAATCCTAAAAAAGGTGAATTTTATACCATTTTGGGTTTAATGAGATTTTATCAATGGATTTAAATGAATTTATAGATTATTTTGAGATAGCAAAAAAAGGATAAATGAGGCTTAAAGCTTGATATCTTTATATCTTGCATCAGTTTTGCCAGTGTAAGGCTTTGAGCAGCTAAAATCAAAATGACAATAAAATTTTATTAAAGCAAAAACCAAAACCATAATAATAAAACTAAACATTTATAAGCCTTTTTTAAAAAAATACCATAAAAGGATTAAATATGTCAAATGCTACTTTAACCTTTGGAGTGGATTTAAGTGAGTTTAATACTGCTTTTAATAAAATTAACAAAACAACAACCACCCTAAGCGATGCCCTAGATAAAAACATAAAAACAGCACTAACAGCGATAAAAAATGCAAATCACAAAAA # Right flank : CAGCAACAAAAACAGCTAAATTTAGTACTTTGTACCAAGTTTTACTATATTTATTTTACTAAAAAATGGCTTAATATAGTATTTATAAAATCATCAAATAAAGCATTTAAGCTATTTTATAAATCTTAAATATAGCTTTATCAAGTTATTTAAAGCAATTTTTTTTAAGTATTTAGGCAAAGGTTGATCCATAAATAAATCTAACTTAACCATATTAAATCAAAATAAAAATAGCTATAAGGCAAATTTTAAACTCGCTAAACGCTTGTAAATTATTTTATTTTTTCATAGTCTATCAAGCCGATTATACCGTTTTCTATTTTTTTATGACAAGCCACGCAGTTTGCTTTGGATTTTACATCTTTTCTTAAAAATACTTTTTCATCTATCTTTCTATGCTTTTTTATCCAGTATTCATTTTGAGTTATGGCTATATTTTGGTCGTTTTTTGCATATTTAAGTATGTTAAATGCAGTTTTATCACCCCTTGTCTGAGCAGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAATCCTAAAAGGATAAATTTATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.50,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //