Array 1 103197-108354 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDJQ01000013.1 Oerskovia turbata strain JCM12123 contig13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 103197 29 100.0 32 ............................. TGCACCTGGTCGAGGAGATCGACTACGAGTAC 103258 29 100.0 32 ............................. ATGCTGAAGTCGCCCGCGCATTACAAGCACTC 103319 29 96.6 32 ............................G GTCAAGACCCGAAAGTCCAACGGCTCCTCGAA 103380 29 100.0 32 ............................. TCCCACGGGTCGGCCTCGGATGCCTCGAGCGC 103441 29 100.0 32 ............................. GTCAAGACCCAGGCCAAGGACACCGGCAAGGC 103502 29 96.6 32 ............................G ACCCAGCGCGTAGCGGCGAGAGCCAGGTCCTG 103563 29 100.0 32 ............................. CCGTGGCTGAGTACACACCCAGCACCGAGCAG 103624 29 100.0 32 ............................. CTCAGACCGAGGAATTCGACTGTTCGGCCACA 103685 29 96.6 32 ............................G TGGGTGAGCGCGGGGCGCTCGTCGGGGCCGGG 103746 29 96.6 32 ............................G TCGCCCGGGACTCGACTCCCGAGGTCGACAGA 103807 29 100.0 32 ............................. TTCAGGACGCACGTCCCGGTGGCGACGACCTC 103868 29 100.0 32 ............................. GACGGGTCGTGGACGGGCGCAGACCGAACGCG 103929 29 100.0 33 ............................. GGTGGCCACCGCGACACCAAGGCCACCGCCTGC 103991 29 100.0 32 ............................. GCCCCGGCTGCTCCCCCTGCCTGCCGGGGCGT 104052 29 96.6 32 ............................G CTGTCCCTGCCCCCTCGACGCCGTGCGAACAC 104113 29 96.6 32 ............................G AGATCCCCGCCGGCACCCGCATCTGACCATCG 104174 29 96.6 32 ............................G GAGGACCGGTGGCCCGTGCGGGCCTGGTACGT 104235 29 100.0 32 ............................. ACCCGGTCACGAGCGCGACGCAGCACCCGGAT 104296 29 100.0 32 ............................. CGGCTGTCACGGGGGGCCTGGTGTGGGTTGGG 104357 29 96.6 32 ............................T GGCTTGATTTCAAGGGAGTTGCCGTAGGGGCG 104418 29 96.6 32 ............................G GCCGAGCACAGCGCGGCGACCGTGGCCACGAC 104479 29 96.6 32 ............................T CGGCCGGATTCGCAGCCCGGCGCGTTCTGGTG 104540 29 100.0 32 ............................. GGGAAACCGTCAGCAACCGTGAGGTTGAGCCA 104601 29 100.0 32 ............................. CCCTACCTCGGGTCTAACCTGCTCGTGCCGAC 104662 29 100.0 32 ............................. CGCTCGTCGTGGCCGGGACCGTTCGGGCACGC 104723 29 96.6 32 ............................G CTCCCGGCCGGCGCGCAGGTCTCTCCCCTCGC 104784 29 93.1 32 ..A.........................A GGCTCGCAGGCCGCCGGCGCGCTCTCGGGCCT 104845 29 96.6 32 ............................G GAAGCCATGTCGCTCGGCATCGACTCCTACTC 104906 29 96.6 32 ............................G TCCGGCGTCAAGCAGGTGTTCATCGACCACAA 104967 29 96.6 32 ............................G GTCTCCACGCTGTGGATCGACACCACGAGCGG 105028 29 96.6 32 ............................G CGCGGCTTCGACGCCGCGGACGAGACCGACAC 105089 29 96.6 32 ............................G TCGTCGCCGGCGGTGCCGATGATGAGCTCGAC 105150 29 96.6 32 ............................G GTCGTCCCGGAGCAGCTGCGCCTGAGCGCGGG 105211 29 96.6 33 ............................A GCTCGTGCTGTAGAGCCATGCCGGGACGTCGTC 105273 29 96.6 32 ............................G ACGTGGATCGCCGACGGACGCTCGGCCTCCGA 105334 29 100.0 32 ............................. GTCGCCTCGAGGCCGCGCGAGGTCTCGACGAT 105395 29 100.0 33 ............................. GCCCTCACTGCCGACGACGTCTTCGGTGCCGAC 105457 29 96.6 32 ............................G ACCACCGGCGACGACGCCCGCACGCTCGGCGA 105518 29 100.0 32 ............................. AACGTGCACAGCGCCGGCCTCCGATTCCTGGC 105579 29 100.0 32 ............................. CGAGGGGATGATGCGGAACCCGCCGGCGCTGC 105640 29 100.0 32 ............................. CCATCGGGCAGAAGGGCGTCGCTCACGCCGTC 105701 29 96.6 32 ............................G GTCGGCTACGACGTCGCCCGCGAGACCTCACA 105762 29 100.0 33 ............................. CACTCGCGCTGGGGCTCGGGCACCAGGGCGTAG 105824 29 100.0 32 ............................. TGGACGTTCGTCCAACTGTTGTCCACGTGCAT 105885 29 96.6 32 ............................G TAGTCCACGACCGCGCCGTTGGCCTGTATGAG 105946 29 100.0 32 ............................. GTCCGGGTCTCCATGGACCCCTCGTCCTACAT 106007 29 100.0 32 ............................. GGCGCGTCGGCGGGAGCAGTGGCGGGAGCGTC 106068 29 100.0 32 ............................. TGGAAGAGCAACGGCCACCACAAGCGCTCCGC 106129 29 100.0 32 ............................. GCGGCTACAAGCTGTACGCCTTTGCGCCAGTC 106190 29 96.6 33 ............................G ACCCACGCGTTTGGTGCCTTGCCCGCCGTGTGC 106252 29 100.0 32 ............................. TCGTCGGGGGTGACCGAGACCAGGGATGCGGG 106313 29 100.0 32 ............................. CATCAGCGTTACCGGGTCTACAACCTCCTTAA 106374 29 100.0 33 ............................. GACGGCGGCCTGCACCTCGGCGATGGCGCGGGA 106436 29 93.1 33 ...T........................G GGGCGCCACCTTGTCACGTTCGGAACGAGTCGG 106498 29 100.0 32 ............................. CTCTTCACGAGGAATGCGCCCTTCCCACTCCT 106559 29 96.6 32 ............................G TACGACGCGGCATGGGCCGCTGCGGACGAGGT 106620 29 96.6 32 ............................G CCGGGTAGGGGTCAGCCGTCGAGCCGTCGAAG 106681 29 100.0 32 ............................. GCCGGGTCTGGCACCTGGCGCAGCCCCTGTCC 106742 29 100.0 32 ............................. CCGCCGCGGACGTGAATCCCTTGGACCCCTGG 106803 29 96.6 32 ............................G CCCGGCTCGAAGCGCTGACCGCCCCGGTGTCC 106864 29 96.6 33 ............................G TGCCGCGACCTGCCCGAGTCGTTCCTCGCCGAC 106926 29 96.6 32 ............................G TAGTCGCGGAACTCGTCGGACGCGAACCGCAT 106987 29 96.6 33 ............................G TCACGGGGCATGACCTCCTCGACGGCCGCGGCC 107049 29 100.0 32 ............................. AGGCGCCACCCGGTCAACGTCGGGAAGATACC 107110 29 100.0 33 ............................. CTCGTCGGCGCGACCTGCGCCGCCGAAGACTGT 107172 29 100.0 29 ............................. CTTAGCGATTCCGCCACCGATGCTGTTCC 107230 29 96.6 32 ............................G AACCGGGTCGGCACGGCGACCGTCCCGTACTC 107291 29 100.0 32 ............................. GCGGGAGAGCTCGGCGCGGTTCTGGACCCGGA 107352 29 100.0 32 ............................. TCGCATGCTCTGGGCTCCTCAGAAGATCTGGA 107413 29 96.6 33 ............................G GACCAGGACGCCCAGCTGCGCGAACTGCGCGGC 107475 29 100.0 32 ............................. GAGCCGGTCGGGCGCATCGCCGCCCAGCGCGA 107536 29 96.6 32 ............................G CACGCGAGCACCGCGGCGCTGACGGTATCGCC 107597 29 100.0 32 ............................. GTCACGCGGGTCTCATCCGGCGGGGTGAGCTC G [107619] 107659 29 96.6 32 ............................G GACCTCAAGACCGCGATCCGCAAGGAACAGCG 107720 29 96.6 32 ............................G TTCAGGACTGCCTTCCCACTGGGCGTGAACTT 107781 29 96.6 32 ....G........................ AGCCCGACCAGGCCGATAACGACCGGAAGAAT 107842 29 100.0 32 ............................. CACAACCCCGGCAGCGTGACCTCAGGGGGCTG 107903 29 93.1 32 ...............A............G TGCGACGCCTCCACGACCTCGCGGGCGTACCC 107964 29 96.6 32 ............................G GTAGGTGTCAAGCGCTGCAACACAGTCAAACT 108025 29 96.6 32 ............................G GTAGGTGTCAAGCGCTGCAACACGGTCAAACT 108086 29 100.0 32 ............................. CACCCCGAGACGGACCACCTGCAGGCCGACAT 108147 29 96.6 32 ............................G GCGGACCTTGTCGACGGCGGTGGGGTAGTCCG 108208 28 89.7 32 .C...............-....C...... TCTGGCCGTTCGGTGGTGGCGGTCTGGGGTCG 108268 28 79.3 30 ...........A..G...T...-..G..G GGCCCGATGGTGTCGTCGCGCACCGCTTCT 108326 29 72.4 0 CC.......T.A......CA.....C..G | ========== ====== ====== ====== ============================= ================================= ================== 85 29 97.5 32 GTGCTCCCCGCGTGAGCGGGGGTGATCCC # Left flank : CGTGGCCAGCGGGGGCGCCAGCTACCTGATCGAGGGCGGTTCCCGTGGTGGTGAACATGACGGGCGACGAGGGTTGGTTCGGGTACAAGTCGCTCGACTCGCTCGTGGGCGACGCCTGGACCCAGTTCACGGGGCTCCACGACCAGGACTACCACGAGGCGCGGGAGGCCCATCAGCCGCGGAACCGGACAGCGACAGCAGCCCGACGCCGGTCGGCGCCTCGACACTATCGGCTGGTGAGAGCGGGGACTTCGACGACGAGGACGAGAACCGCCGCCGACTCCCCCGGCTCAAGGCGCTCTTCTCCCTTTGAAGACCTGGACGACGATGCTCGTGCGGGACTGCCGCCGAGCGGGAGACCCGCGACGCATGTGCCATACATCAACGAGGGCGCCTCGTTCGTCAGTTCAGGAAATGTGAGCGGAGGCCCGTGCATGGTCGCCGCCGGAGAAGTGAAGGCAATACGCTGACAACGGCGGTAAAGTCGCAGGTCAAGAAGA # Right flank : GAGTTCTCACCGCTTAGCCACCCGCGGCCGCCCCCAGGCCGCCACCGCCCCACGAGCGCACCTGGATTTCAGGCGTCCTCGGTGGACGCCGGGACCAGGCCTCCGAGGGCCGCTGCGGCGGCGCCCAGGACGAGTCCCACGCGCAGGTGCGGGGCGCGCACCCCGCGGGCACGCATGCGCTCGCCCCAGCGGTACGCGCCCTTCTCCCCGACGACGGCGAACGCGGTCGTCGCCCCGAGGACGACAGCCGTTCCGACGGCGATCGCGACCTTTCCGCCCGGGGTGATCTCGACCGGCGTGAGGGTGTACGGCGTGTTGTCCGGGACGTCTTCGTCGGACGTCTGCTCCCAGGGCGTCGTCGTGCCTGCGGCGACCTCGGAGCCCTCGGTGTCACGCAGGGCGTCGCGGACCTTGCGGACGCCGTCGATCGCCTGACGGCCCTCGCCGGTCCGGAGCAGCACCGCAGCGCCGGCGACCCCGCAGGCCGTCTTGAGGAGCGC # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.68, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGAGCGGGGGTGGTCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //