Array 1 637-791 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAION010000037.1 Coprococcus comes strain MSK.11.53 NODE_37_length_23242_cov_243.812, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 637 29 100.0 34 ............................. TAAATTATACTGCAAAAAAAACCAACTGACTGTG 700 29 96.6 34 .......................G..... TTATTTGCGCTGCAATCGCAACCAACTGACCTCT 763 29 96.6 0 ...........................C. | ========== ====== ====== ====== ============================= ================================== ================== 3 29 97.7 34 CTGGATGTCAGCAAGAATACGGCATTGAC # Left flank : CCACGGCATTTGCCGAGAGCGAGACGGAAGAAACACCTGTATGCACCTGCGAAATAGCTTGCACGGAAGAAACAATGAACACAGAGTGCCCTGTCTGCGGTGCAGAGGGTGCTTTGGCAGAAAACTGTGGGAAACATGTCGAACCAGCAGCCGAGGGTGAAGCATCCCAGCCGGAAGGAGAGGAACTTCAGGAGAACCAGGACAGCGATATGCCGGATACACAATCCGAAGCAGCTCTAGCACAGGTGAGCGGCGAAGGAGAGAATGGCATCGCTGTTCAGAGTGCCGGTGTTGCTATTGACAATACCAACTTTCCGGATGCAAATTTCCGCACTATTGTTGAATACTATGATACCAACAAGGACAGTAGTTTAAGTGATACAGAAATCGCAGCAGTTGAAGAAATTGATTGCTATGACAAAGGTATCTCCAATCTGAAAGGCATTGAATACTTTACAGCACTTCGTTCGTTGAACTGCGGTTACAATCAACTGACCTCT # Right flank : CGAGCGTATCGCTCATGGGAAGCCACTAAGGAACAGACTGCTGATCTGTATCATAGGATTCTAACCTCTGCCGGGTACTCCGCCAGCTCCTTAGAGAAGTATCATTATCTTTCTGACTGTCATCGCCATGTCAGGAGCAACCTGACACTCATACCGGGAGTTCTCGCTGTTCTGCATCCACAAAAGTTATGGCGTACCCGATAAGGTGGCTATCATCAGAATTAACGTCTTAGTGACCTGTATATTCAGTTTTCAATTCAAGTGAAAGGATTCCATTTTTATTGATTGGAATTACTCCCTTCACTTATTTGGAATTGCTCAGGCTTTTGACACCCTATTTTTTATAAATTTTTTTAATTATTTTTTTGAGAGAGATTTTAGAACAATAGATAAGTAGAAAAAGCTTCAAATCCCGTGTATAATTAAGAAATAAAGATAGAAACAAATCGGAAGTTGTGAACTTAGAATTAGAGGTGTTGAAAATGAAAATAATAATTATA # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGATGTCAGCAAGAATACGGCATTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 136219-138267 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAION010000003.1 Coprococcus comes strain MSK.11.53 NODE_3_length_139327_cov_164.901, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 136219 30 100.0 36 .............................. TCTTTTAACAGTTCGATCTTTCCGTCTACTATTGTC 136285 30 100.0 35 .............................. AATACGCAGAAAGTGAACTGAAAGATCTGGAAGAT 136350 30 100.0 35 .............................. TTCATTAAAGTAAATTTTTTTTCATCTACCATGTA 136415 30 100.0 35 .............................. CACCAGTTTTCTCCGCAGATATCCGTGATGTAATC 136480 30 100.0 36 .............................. CTCCTTTCACCCATGCTTTCCCGTCTTTCTCCTTTG 136546 30 100.0 37 .............................. CCTGTAATGTCAGAAGAAAAGTCCTTTTCTGTCCATC 136613 30 100.0 36 .............................. TCCCAATACTCTGCGATTTCCTGTGCTGCCGGTAAG 136679 30 100.0 35 .............................. AAAAAGACATTATAAATGGTACAGTGAGTAGTATA 136744 30 100.0 35 .............................. GATGCGGACAATGCCGACAGTTTTAACGATTATGT 136809 30 100.0 35 .............................. ACTTGGTATTCCCTATGAATTTGGTGAATGGACAG 136874 30 100.0 35 .............................. TTACGAATGAGGCACTATCTGTACCGCTGATATAT 136939 30 100.0 35 .............................. AGAAGCATACCAGTCAGAGCCATTGAAAGCAATGA 137004 30 100.0 35 .............................. GACCGAGTCCACCGGCCATATCCCCAAGTGCCGCC 137069 30 100.0 36 .............................. GCTTGTCCGGCACATCATCAATGGTCTTAACACCTT 137135 30 100.0 34 .............................. ATTTGCTGTACAATACCTTCGACAAAACCACAAT 137199 30 100.0 34 .............................. TTATACTCTTTGTTTTCTTGTGCTGTCAATACTC 137263 30 100.0 36 .............................. ATGGTATATGTAATTTTCACTTTTTCCTGCTCTTCC 137329 30 100.0 34 .............................. AGTTTGAGTGTACAGCTGATCTTGAAAACGACAG 137393 30 100.0 34 .............................. ATTAGTGGTTCTTTTAGCTTGAAACCTCCAAGTG 137457 30 100.0 36 .............................. ATCAGTTGCACTCTAAGTAAAAGCATGGTGCCCTTA 137523 30 100.0 35 .............................. GTTCTTCGATGGTCTTATCTGCCATCTTTAACGCC 137588 30 100.0 34 .............................. GCGCAATTGTGAATGCTTTTACGAGCCAGAACTG 137652 30 100.0 35 .............................. GAGACTGCGGGTGAAATAAATCACGGTTGACAGCA 137717 30 100.0 35 .............................. TCAGGTCGGCCTGTGCCGTTGCCGCAGCGGACTGT 137782 30 100.0 36 .............................. TTTGTAGTTCCAGGAGATACTATAATCAATGGCGCT 137848 30 100.0 34 .............................. CTCAATGAAAGAGTGAAAGAAGCAATGGAAAAAA 137912 30 100.0 35 .............................. GAGCTACCGGACGCCGGGTTGCCTGTTCCCTCCCA 137977 30 100.0 36 .............................. CATTCGGATTGCTGATACCATTCAGCTGCGCAACCT 138043 30 100.0 35 .............................. TTCATGATCTGCTTCTTTGCAGCTTCACTAGAGAA 138108 30 96.7 35 ............T................. GCAGAGAAGAAATTACCAGAAACAGTACGGTAAAG 138173 30 100.0 35 .............................. GTTTACTTTTGAGGAAGCAAACGCGGAACTTGCGG 138238 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 32 30 99.9 35 GATAAACAATAACATGAGATGTTTTGAAAT # Left flank : TTGAAAGAAGGGATGTAATGAAAAAGAAGAAAGAATTGAATTATAATTATGCATTTTTGTTTTATGATGTGAATGAAAAACGAGTTCAGAAAGTATTTAAGATCTGTAAAAAGTATCTTTCACATTTTCAAAAGTCTGTATTTAGAGGAGAGATGACGCCATCAAAGTTTATACAATTGCGGAAGGATTTGAACCAGGTAATAGACAAGGATGAAGATTTTATTTGCATTATCAAGTTGATGAATGACAATGTGTTTGGAGAAGAAGTTTTGGGAAATGGAGGGGAGGTAACAGGAGAAAGTTTAATGATATAATTATAGGATTTTTACCAGGCGGAAAAAGAATGAAAAATCCAGGAAAGCTTGAAAAATTAAGAGATTTATGGGATGATAAGTAGGGCGGTCCAGGATAAGGGTGTTGGCTGGTAAAAAATGGAGAAATATAGAAAATATAAGGGGAAAAAGGGGAGGGGAGAAACTAAAAAACGCGGAAATGCGAGG # Right flank : TAAAAAAATTGCACTTGCAGGTTTGAAGAGAAAAGAGATAAATAATAACCTTTTGTGGAGCAATACACAGTTTACATTTTAGAATCTGTGGAAAATATAACGAAGAAAAATGGAGAATAGATGAAAAAAGTAAGATGGATTATTTTCGGAATGTTAGTAGCTTTGCTTGCAGGATGTTCTGGAAAGAAAACAGCAGAAACTTCTGTGGATGCAAAAAATGCGGAAAGTACAGATGAGAAAAATACGCTTGATTTTGTAGATGCACACGGAGAGCGTTATACGGTGGAAATCAATGAAGCAGTTGCGAAGAATCCGTATGATAAAGCACTTTTTGTAAAAAATGAAAATAAGATCAGCTATGAGGATAAGAAATATACTTCAAGGCTTGGCGTAGACGTATCTGTTTTCCAGGGAGATATTGACTGGGAGCAGGTGAAAGCAGCAGGCTATGAGTTCGCAATTTTGCGGATCGGATATCGTGGCTATGGTGAAGAAGGTAC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAACAATAACATGAGATGTTTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //