Array 1 171201-173557 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSPR010000006.1 Corynebacterium sp. Sa1YVA5 NODE_6_length_227483_cov_25.342392, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 171201 36 100.0 37 .................................... GCAACTCGCTCAACATCGCTGCACTGCTGATCGAAGA 171274 36 100.0 37 .................................... CCATCCGGCACATCCGGCACACGCACAGGACACCGAG 171347 36 100.0 34 .................................... GTCGCTGTCCTAGAGGAGCGGAAAGCCGACCCGC 171417 36 100.0 36 .................................... GCGGGAGAGCATCTCATTGAGAATCTGCTCGTTGGT 171489 36 100.0 36 .................................... GCCACTGACGTGTCCCGCGGGTGGGTGTCCGGCAAG 171561 36 100.0 37 .................................... CCAGCAGCTGGTCAGCGAACCCGACCGCCTGCGACTG 171634 36 100.0 38 .................................... GCCGTGAAATGCGCCTATCTAAAGCCAAAATCATTGTG 171708 36 100.0 38 .................................... AGGCCACGGGGAAAGTTTCCCCCGTAATATTTTTCGCC 171782 36 100.0 36 .................................... GGCACCACCATCTACGCCGACAAAGCCGCCGCCGAA 171854 36 100.0 37 .................................... CTAAGTCGGGCTGCCCTCACATAGGCCAGTATTTCCA 171927 36 100.0 34 .................................... GAAACTGCACGGTGTCCAGCACACCGTTGATTTC 171997 36 100.0 35 .................................... CTAACAATCCCCCGTGGGCACGGTGCGGGCGGGCC 172068 36 100.0 36 .................................... TTGCAAGCAGTGGCACCTACTGGAAACATTTCTTAT 172140 36 94.4 38 ........G............C.............. GGAAAAGAACATTGACATTCCCCTGACCTCATGAGGAA 172214 36 100.0 36 .................................... CCGGACCCCGGAGTACATCCTCGACCGGGCGATCCG 172286 36 100.0 39 .................................... TCGGAGCCACCAGCAGGTTCTTTTGGGGGAAGCCACCAC 172361 36 100.0 39 .................................... TCGGAGCCACCAGCAGGTTCTTTTGGGGGAAGCCACCAC 172436 36 100.0 37 .................................... GCTTCATTGACCACGGTGGTGAGGGTATCGACCCCAT 172509 36 100.0 36 .................................... GTCTAAGAAGGCGTTGCAGGCGCGGATGGTGGACTT 172581 36 100.0 35 .................................... ATGATGGGTGCCCCTGAGTCATTCTTCTTGGATGA 172652 36 100.0 34 .................................... TCAGAGAGTGCGAGACTGCGTGCCTGCATAGCGT 172722 36 100.0 38 .................................... TCGCTGAAAATGTTCCCGCAGGAGGTCGAGGAATGGGT 172796 36 100.0 36 .................................... CTATGTACCCACAGGGCAACGAGTGCACCTCGCCAC 172868 36 100.0 37 .................................... CTCCTCCACGGCACCGCCCGCGACATCACCACCCGAA 172941 36 100.0 38 .................................... CACACGTGGACACCACCCATCGACGACCCACCCGTCCT 173015 36 100.0 35 .................................... CCAGCGACGACCGCACTACCGTCAGCACCGAATGT 173086 36 100.0 36 .................................... CCGCAGACACAGCCGGATCGCTAGAGGTCATTTCCA 173158 36 100.0 36 .................................... TTTCCGTTCTCTGAATCTGTGGGGTGGCGCGGTTGT 173230 36 100.0 39 .................................... GACCTCATCGGCCTGGCACGCTGCCACCCGGACTCTGCA 173305 36 100.0 38 .................................... ATGCCGGCGGCGTAGGTGCGCGGACTGACGCTGCATGT 173379 36 100.0 35 .................................... GCCGAGACACCACAGTCGGCACCCGCATCTTCGCC 173450 36 100.0 36 .................................... TCACTGCAGGAGGGTGACTGGTGGGCGAATCTCGGG 173522 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 33 36 99.8 37 CCTGCCGTCGTTAGTTCGACGGCCTTTCATTGAGGA # Left flank : TCCTGTTCGTCCAGGACGAGCCGGCGAACCAGGGTGCATGGCCGTTCTACCAGGAGCACCTGCCCAACCTCATCGAGGGCATGCTCCCGATGCGTCGCATCTCGCGCCGTTCCCAGTCCTCGACTGCGACCGGCATCTCGAAGGTGCACACCATCGAGCAGCAGAAGCTGCTGGATGATGCCTTCAACGCCTAGTCTCCAACACTCCAGTTGATAGTCTGAACCCCGCTCGTACCTTTTGGGTGCGAGCGGGGTTCCGCTATTCCTTCATAAGCGATAATATTCATCTACCGCCTATAGCGTTTGACTTCTACATTTTAACTTTGCGAGCATCCCGGTCACCCAGGAAATCCCGGGCTTTGCTCGCGCCATCATCCGCGCAGGTAGATGACTTTCCAAGGCGATGTTGTCGGTTTCCTTCCAGAAGCGCTGCGTTATTTGGGAACAGCACTCGCAACGCCCCCTAAAACACCTAATCAGAGGCTATTATTTAAAAGGGCA # Right flank : ATACAAGTGCTGTGGGATGCCGCTGACCAAGAGGCGACCTGAATATTCGCGGTTAGAAGAACCGGTGATGGTGTGCTTGAGAACCACTTGCCATTGAGTGCTGTTGGTCTCGGACAGAGCCATTCCTGGTGCCTGAGAGAGCCACTATCTTTAGGCTCCTTTAAGTCATATGAGAGGCATATGACTTAAAGGAGTTACCTCTGATGGTAAATCGAATACCGGCGAAGCGTGTGCTTCGCCTCCGCGCAGAAGGATTGTCACAGCGAACAATCGCCGCGTCACAGCGGATCTCGCGTAACAGCATCACCGCGGTTTATGATGCCGCGGACACACTCGACATTGATTTCGACGACATCGCTGATATGGACGACGCCGATGTTTACGCCCTGCTCTTTCCAGGACGCGGTGAACACCGAAGCATCTTCGTTCAACCAGACTGGAAGCAGGTACATAAGGAACTCGCCAAAGTCGGAGTGACCCTGAAACTCCTCCACGGTGAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTGCCGTCGTTAGTTCGACGGCCTTTCATTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.00,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 2 176192-176658 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSPR010000006.1 Corynebacterium sp. Sa1YVA5 NODE_6_length_227483_cov_25.342392, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 176192 36 100.0 34 .................................... TGACGTGCTGGGCACGATCCCCGAGCTAATCGTG 176262 36 100.0 36 .................................... AGTGGGTTTCCTGCGCCATCGGTCCACGCCGATCCT 176334 36 100.0 36 .................................... TGGTCATTGTGGATGGTTACGCTTTTCCACTCCCCG 176406 36 97.2 35 .....................A.............. CCAGGGTCGGCTGAGCTGATCTATGATAGCCCTGG 176477 36 100.0 37 .................................... ACCGACGAGGAACTAGCCCGGATCGAGGCTGAGCACG 176550 36 97.2 37 ...................................G ATCCACCCCGCCTCAGCCGGCCATGGCCTCAACCTCC 176623 35 80.6 0 ...................T..-T.C.T...T...T | C [176654] ========== ====== ====== ====== ==================================== ===================================== ================== 7 36 96.4 36 CCTGCCGTCGTTAGTTCGACGGCCTTTCATTGAGGA # Left flank : GTCATCACCGGTACCGGGCGCATGTGATTCGGATGCCTGATCTGGCGGAGGCGTGGCGAATGGCTGCGGATCAACCCCAGGGGGCAACGAAGTTCATCCGGAAGTACACGGCATTTACCGTGCTGGTGCTGGATGAATGGCTCTTGGAGAAACCCGATGATCACATCCTGGCGATGTTGTTGGAGTTGATGGAACGCCGGTATGACACCACGTCGACGATCTTTGCTACCCAGTACGCGAAGAAGGATTGGCATGCCCGTCTTGGTGGTGGGGTTCATGCGGATGCGATCATGGATCGGATCGTGCATAACGCCACCTGGATTAATACGGGTGAGGTTAATATGAGGGAACACACCGCGGCCAGAACCCGGGAGTAAGTAGTTGTAGTGCGTGGGGAGCGGTAGTGGTTCTGGTCAACACCACTACTGGCTCCCATTCACACCATCGTCGGGTCTGAAAGGCACGAACGGGTGGCTCCTATAAGAGCGAATATTCAGCGA # Right flank : TGTCAGTCTTTTCGCCATTGACTTCCAACCAGGTGCGCCGCGGACAGAACACCGTATGAAGAACCAAGCTTATCGGCAATGATTCGGTCATAGGACCACAACCTCCCCCTTCAGTATCTGGCGTTCTGGGGCTGAAGAGCTCCCAGTTTTCAATACCGGGTACTTGGCAAGCGCCACGATGCCTCGTTGTCTGAGCCAAGTTGATGCCGCAAGCCCATCGAGAAGGAGCCTAGAATCTCCCTTCTCCGCTTCAGGTTCCATGAGTTCATGGGATGACACCACATGCAACTCGTGGGAAAGAATGATCGTCTTCAGGCGCGCTAGAGTCACGGGAACTACGGGGATTGGCAAGACTGCATACCTGGTATGCAAGATATCTGAAGGGAATGCTGCTGGTGTAATGCTCAGGGTATGGCTCTGATGACTAAGGGGAAATATGCTGATACCAATGATGGCAGCGAAAGCTAAAGCAACATCTGTCGGACCCGGCGAGGTAAACC # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTGCCGTCGTTAGTTCGACGGCCTTTCATTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.00,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //