Array 1 5114672-5113243 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR655208.1 Chitinophaga vietnamensis strain VP 7442, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 5114671 47 100.0 30 ............................................... TACGATGAAATGCTGGAACGTGCCATATTA 5114594 47 100.0 29 ............................................... CGCCGGCTATCGGTGTGATCGATATCACC 5114518 47 100.0 29 ............................................... TTGCCCCTATGGTAGATGATCAATTCATC 5114442 47 100.0 29 ............................................... TTATCTTGGTGTGAAGCCTGCAGAGCTTT 5114366 47 100.0 30 ............................................... TACATGGTTTTCGTAATGTGTATGAAGCTC 5114289 47 100.0 30 ............................................... GTTCAGGGCAGATACTTATTCCGAAGTTCA 5114212 47 100.0 30 ............................................... TACATGGTTTTCGTAATGTGTATGAAGCTC 5114135 47 100.0 30 ............................................... GTTCAGGGCAGATACTTATTCCGAAGTTCA 5114058 47 100.0 29 ............................................... TAATAGATAAAGAAACAATACTCATAAAC 5113982 47 100.0 29 ............................................... AAGCGATAAAATGTCATTAGCATTAAGAA 5113906 47 100.0 30 ............................................... ATGCGTGGGCGGCGGGAATCCAATTGCGAG 5113829 47 100.0 29 ............................................... ACCTGGAGACTACTGGTACCCTCTATTGG 5113753 47 100.0 30 ............................................... AGCATATGCTTAATTTGAGTTATTTTTACT 5113676 47 100.0 30 ............................................... TTCAAGAGGGGCCACCAGCCGCTCAATTTT 5113599 47 100.0 31 ............................................... ATTATACAGTTAGGCCTTATAAACTAATACA 5113521 47 100.0 29 ............................................... TGTCGCTTGCGTGAAACTTGATGGTCTTC 5113445 47 100.0 30 ............................................... AGCTATCTTCGTAGCACAATGGCACATCTA 5113368 47 100.0 31 ............................................... AGGCGGCAGCCAGATATCCATATCCAGCAAA 5113290 47 70.2 0 ......C.A......G.T.....C....A.CACC.A....AG.T... | T [5113245] ========== ====== ====== ====== =============================================== =============================== ================== 19 47 98.4 30 GTTGTTTGGAACCAAAGGTAATGTAAAGTTTGAAAGCAATTCACAAC # Left flank : CCAGGAAGCTATTATATCCGGTCATGCAAACGACATATTTAATTTAATATGAAATTTGAACGATTAAACGCCTATCGCGTCATGTGGGTACTTGTAATGTTTGATTTGCCTACGGAAACAATACAGGACAAAAGAATATATGCAAAATTCCGTAAAAACATTCTTGCGGACGGGTTCTCGATGTTTCAGTTCAGCATGTATCTTCGCCATTGTAGCAGCCGGGAAAATGCAGAAGTACATATTCAGCGGGTCAAAAGAATCCTTCCTGCTAAAGGTCATGTTGGAATATTAAATATTACTGACAAACAATTTGGTATGATGGAAATATTTCATGGCCAGGAGCAGGTGGGTACACCTGCTCCTGTACAACAACTGGAACTCTTCTAATACCAACATTAAAATTTTGCGGATTATAGCCATAAAAAAACGGGAGGATCTCCCGTTTTTTTATGCTGTTCCGGAGGCTAAACCCTCTACGGGCAGGCATTCCATAAAAGTCA # Right flank : ACAGAACAGGGCAAAGCGATAACCTACCCTAAACCATATTTATTACATGCCTTGAACCCTCTACAGTATACAACAGCCTATCTATAAAAACCTCTTAACTCCCCAAACTAATCATCTGTGAATACCACGTCTCTTTCAACATTTTCACCAGATGATTGAAATACTTATCGGACCCCAAGTTGGTCGATATCGCTATCTGCGCCGCCCAGTATGGTTCTGTGAGGTTGGTATCATCCAGCAGGCTAAAAATAGAAAGCTGATTGGTAAACTCTTTCGTTCCTTTCTTTTTGGCGGGGCGACCATAGTCTCTTAAAAAGATGTTATAAGCCAATGTGCGGTGTACGTAATCTTTCGTGGAGTCGGCCACAAATTCCGGCGCAATCACTAATATAGCATCATGTGGATACATCCTGGATGCTATTCGAATATTCTCATCAGTGACGTGGCTCACATCTCCCAGATACATTAGCGAAGAAGAGAACGCTTCGTTTTTAAGCTCC # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTTGGAACCAAAGGTAATGTAAAGTTTGAAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //