Array 1 2017072-2013562 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065695.1 Delftia acidovorans strain FDAARGOS_891 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2017071 28 100.0 32 ............................ TGGAAGAACGCAGGCCATTCGGGGTTGGTCTT 2017011 28 100.0 32 ............................ CAGCAGCCAGCGTGTCCGGGCTTGGCGCTGTT 2016951 28 100.0 32 ............................ ATGAGGCCGTGGAACTGGTGGGCTATGGCGAA 2016891 28 100.0 32 ............................ AACACGCCGAGGCACTCATTGCGTGCGGCCCA 2016831 28 100.0 32 ............................ TATGTCTGCGGCAGACCACGTGCGGCGCCCGG 2016771 28 100.0 32 ............................ AAATCCAAGAGCACGCCAAGACCGCCGCCGCC 2016711 28 100.0 32 ............................ ATACCCAGCAGCGAGCTGACGCCGTACTGCAC 2016651 28 100.0 32 ............................ ATCGCCGATCCCCTTCACGCCCTTGGCGGCTT 2016591 28 100.0 32 ............................ TCAGGGTCGGGGGTGAAATAGGCGACGGTGGC 2016531 28 100.0 32 ............................ ACATAGTCGAAGATCCGCGCCACGCCGCTGGA 2016471 28 100.0 32 ............................ TGGCCCGTGATTCCAACCCCGAGCCTGCCGGC 2016411 28 100.0 32 ............................ GGCCCCGACGTGGTGGCAGGGCGCTGGTACAG 2016351 28 100.0 32 ............................ TTCCAGAAGCAGGCCGAACTGCGCTGCAACAA 2016291 28 100.0 32 ............................ TTGACCTGCTGATATTCGCCGGGCGGACCACA 2016231 28 100.0 32 ............................ TTGTAGTTACCGGAGCCGACCCACGCCACCTC 2016171 28 100.0 32 ............................ TGACGATGTGATCGAGGGCGTGCCCGAGACCA 2016111 28 100.0 32 ............................ TTCATGCGCTCGGCAGGGATTGTCCAAATCGC 2016051 28 100.0 32 ............................ AGACCTGGGGAGCGTCAAAGCCAGATTACGAC 2015991 28 100.0 32 ............................ ATGCCCCAGCCGCAGACCGTGGCCGTGCTGTT 2015931 28 100.0 32 ............................ AGCACAACAACCTCATCACGCCCGAAGTAAAG 2015871 28 100.0 32 ............................ TTTGGGTGTCTGGGCGGGGTATGAGACGGGCG 2015811 28 100.0 32 ............................ TTCAAAGGCTGGGCCGACACCCTGACCGGCTT 2015751 28 100.0 32 ............................ GTCGCGCGGGTCAGAGCCTGGGCCATCGCGCT 2015691 28 100.0 32 ............................ AAGTCCAAAAGCCGGGCGTGCTGATGCGCTGG 2015631 28 100.0 32 ............................ TATCAAACCGTCGAGCTGGGCGATACCGATAG 2015571 28 100.0 32 ............................ AGCTTGCGGCACAGAGCAATGCTCCACTTCTC 2015511 28 100.0 32 ............................ GAGCAGTCACTGCAGACGCTGCAGGATCTGGT 2015451 28 100.0 32 ............................ TGTAGCGCGCGCGGACTTCCGCTGGCCCGCAC 2015391 28 100.0 32 ............................ CACTGCAGGAATTGCGGTGCAGAGATTTCGGA 2015331 28 100.0 32 ............................ TCTCTCACTCGTTGTTTTGGTTTTCATGCAGC 2015271 28 100.0 32 ............................ ACGCCCGAGCCGCTGGGCTTGAAGATGGTGGA 2015211 28 100.0 32 ............................ AATTCCTGGGAGGCCGCTGACAAGGCCTACCA 2015151 28 100.0 32 ............................ TTGCCGTACTCGACCACCGCCACCATGGCCAG 2015091 28 100.0 32 ............................ AACAAGAACTGCCCGGAGGGCAACAGAACCAT 2015031 28 100.0 32 ............................ GCCGTCATGGCCCACATCGCCAACCGCTATTC 2014971 28 100.0 32 ............................ GACTGCTACCCCTGGACGCGCTGATGGCCGGG 2014911 28 100.0 32 ............................ TGAAAGCCCGCCTCGAATAGCTGGCTCGTGCC 2014851 28 96.4 33 ......A..................... ATGCAACACGCCACCACCGCCATGCGTACCTAT 2014790 28 100.0 32 ............................ AAGGCCACCGGGAGCACGCCATGAACGCCCGC 2014730 28 100.0 32 ............................ TGACCCTGCTGATGGCGCCCCACTCCCTGAAC 2014670 28 100.0 32 ............................ TTTCGTGATGGGCCCTGGGCTTGCCAGGGCGG 2014610 28 100.0 32 ............................ ACGCAGGCACGCGCGCCCAGTCCTCGACCTTG 2014550 28 100.0 32 ............................ AGTGCTGCGTGAAGGGATCGTGGGAGCGACTT 2014490 28 100.0 32 ............................ CGAACGTTCGTCTGCGGATGTTGGTGCGCCTC 2014430 28 100.0 32 ............................ GCGAGTACGCCGCCCAGGCCTTGGGCCAGCCC 2014370 28 100.0 33 ............................ TGGACCAGATCAGCGAACCGCCGGCCCCCTGAC 2014309 28 96.4 32 ...........................G CGCCACCCTGTACAGAGTGCGCGGAGCATACC 2014249 28 100.0 32 ............................ TTCATGGCCCGGATGGCGTCAGCAGCGGCATC 2014189 28 100.0 32 ............................ ATCAAGGCCGTCATCGCCCTGGCCCATAGAGC 2014129 28 96.4 32 ............A............... TGCGAACGTTCCCCTCTGGAAGGAAGCCCCAT 2014069 28 96.4 32 ............A............... ATGCAGTGGCCAGGGCGACAGTGCGCCCGGCC 2014009 28 96.4 32 ............A............... GCCTGGCCGGTGCCGTGCGCGCTGGTCACGGC 2013949 28 96.4 32 ............A............... TGATCCGCGACGTGATGGACGTCACCCTGTTC 2013889 28 96.4 32 ............A............... AATGCCCGATCCCAACAACAGCGACGCTGAAA 2013829 28 96.4 32 ............A............... ATGCCCCCGCCTTCGATCTCGATGCCCATCTG 2013769 28 96.4 32 ............A............... ACGCCGATGCTGCCCACGCTGACGACAGGGCC 2013709 28 96.4 32 ............A............... TGATTCAGGGTTGCGCTGCTCATGCAGCTGTC 2013649 28 96.4 32 ............A............... TGATCCCATCCAGGGGCAGAGCGCTACTAGCC 2013589 28 92.9 0 ............A..............T | ========== ====== ====== ====== ============================ ================================= ================== 59 28 99.2 32 GTTCGCTGCCGCGTAGGCAGCTCAGAAA # Left flank : CCGCGCTGCGCGGCCTGATGGAACAGCCCTGGCTGCAGGGCATGCGCGATCACGTGCACTGCACGCCGCCAGCTTTGGTGCCAGAGGGCGCCGTGCCCTGCCTGGTGCAGCGCCGGCAATTCAAGACCAGCCCCGACCGCCTGCGCCGCCGCCGCATGCGGCGCAAGGGAGAAACCGCAGAACAGGCTGCGGCCGCCATCCCCGACAGCGTGGAGCGCACCCCGGACCTGCCCTACGTTCAACTGCGCAGCGCCAGCACCGGCCAGCCGTTTTGCCTGTTCGTGGAGCAGAAAGCGGTGCAGGGAACGGCGGGCCAGGAAGGCTTCAACACCTACGGGCTGAGCCTGGGAACTGCTGTTCCCTGGTTCTGACCCTTTTTCTGGCGGCCTGCAGACTGCCTTGTAAATCAACAGCTTGGCAGATACCCCGCAATTTGGGGTGTTCGCCAGCTGGAGGTGATAGCTCTTTCAAAATCAATGGATTGGGGAATTTTTTGCCTA # Right flank : CCCTCAACTTTGACGACCGAGTAGTTTTTGTAGATCGCGGCGTATGGGCTGCATCAAAAATGCTCTCTGCCTAGAGTGGCAGAAGCCGCTCTGTACTCGGTCGGATCTTGCCTTGCATTGCCCGGTACGGCCCAGTCCATGGAGCCGCGCTGCTGTTTCCGCAGCTTTTTCCGCATCCGAGACCTTCTGAACCCTCATTTCATTCCCTGTTCCACAAATTCCACGAAACTCGCACCTTCATCGAACACCCTCAGGGCCAGCGACAGGCGCTTGCCGTAGACAGAGTCGGGCCGGCTGAAGGCTTGCACTGCCAGTGCAACAGCAGAGCGTGCCCGATACCACTCGCTGTCGAACTCGCTGGCACAGCCCAGCTTCATGTCCTTCATTCGCCGGATGTGATGCAGGGCGAGTTCTGCGACCAGTTCTACTTCAACATCGGTTTCGTCCCGTACGTTATCCGTGTCGGTGGTAGCAATCAGGACCTCCAGGCGGTGCTCGGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //