Array 1 4104-99 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACIIY010000031.1 Sphingobium wenxiniae strain JZ-1 Ga0373325_31, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 4103 36 100.0 30 .................................... GAAGGAGTCCCGAAGGTCGTACCGCTCATA 4037 36 100.0 30 .................................... TACGAACACGCCGACGGCGGGTTCTACTGC 3971 36 100.0 30 .................................... CGTTCGCGGTATGGAGAAAGGCTGGTTCAC 3905 36 100.0 30 .................................... GACTAAGCGAGTCCAGCCACCATAGTCCAG 3839 36 100.0 31 .................................... ATCCCATTGAGACAGTCCAGCCCACCGCAGT 3772 36 100.0 30 .................................... AAACAGTCGCGCCCCATTCAAATAGGTAGA 3706 36 100.0 31 .................................... ATACCGGCGTGCCAGGCCGTTATAGTATGTC 3639 36 100.0 30 .................................... GGGGCAGGGCCGTTGCAGATATTTCGATCA 3573 36 100.0 30 .................................... TGGTGCACCCACCAGCCGCCGCATCTTTTC 3507 36 100.0 30 .................................... TGGAGCAGATGCGGGCAAAGACCGGCCTGG 3441 36 100.0 29 .................................... CCCTTCAGCCTGGCCGAAGAGTTCATCCG 3376 36 100.0 30 .................................... CAAAGATAATGCGATCCGTAGGAATAGAGC 3310 36 100.0 30 .................................... GTGCCTGCACCCTTCCCGATGGCTGCAAGG 3244 36 100.0 30 .................................... CGCGGGCAAAGCGGATCATCACGCAGAGCC 3178 36 100.0 30 .................................... AAGGGCGGGCGTCGGACAAGCAAAACGATT 3112 36 100.0 30 .................................... CGATGCGCGCCAGGCCGACGACGCCGCCGC 3046 36 100.0 30 .................................... GAGCGAGGCAACGGTGGCCTCGTAGATTGC 2980 36 100.0 30 .................................... TTCCCCGGCAAGGCATCGGGAAAGCTCCCC 2914 36 100.0 30 .................................... GTTTCTTTAGCTATGCGCGCATCGTCATAA 2848 36 100.0 30 .................................... TGCGGCAGCCCATGCGGCATCCCGTGCGGC 2782 36 100.0 31 .................................... TCGAGCGGCGAAGGCGAGATCAGCTTCGTCT 2715 36 100.0 30 .................................... GGAACGGGCACACATCCGCGCCCCGCCCAT 2649 36 100.0 30 .................................... GCACGGCAGCGCCTCGCCATGTTCATCGCA 2583 36 100.0 30 .................................... ACGACGCGCCTTTGCCTCACGCAGCAGGAC 2517 36 100.0 30 .................................... ATGCGTCCTCCTCGATCCGCTGGACCGTGC 2451 36 100.0 30 .................................... AAACTGGGTTTCCTCGAACCGTGACCGCTT 2385 36 100.0 30 .................................... TAAAGGCCAGACTTTACGCGACAAGCGTTA 2319 36 100.0 30 .................................... AACGACCACTTCCTTGCCGCAGCCGGTCAA 2253 36 100.0 30 .................................... TCTATGCCGCGCTGATGGCGCTGGCCCCCG 2187 36 100.0 29 .................................... ATCCGGCCACCAGTCAGCATCTTCGGACC 2122 36 100.0 30 .................................... CCCGCGTCATCTGGACGCAGATCGGCTCGG 2056 36 100.0 30 .................................... AACAGCAACATCGACGCCAATGGCGGCGGC 1990 36 100.0 30 .................................... CGGGGATTGGGCGGAACGCTGGCGCGGGTA 1924 36 100.0 30 .................................... GCGCGCTGGTGATGGGCGGCCCCAAGAATT 1858 36 100.0 31 .................................... ATGGCGGCGGACACGGCGAACCTTAACCAGC 1791 36 100.0 30 .................................... AGCATGGAGGTCCAGAACGCCGCCGATGCC 1725 36 100.0 30 .................................... TCTTTTATCGCGAGAGGCGTACAGCCCATG 1659 36 100.0 29 .................................... TATCCCTGACCTGTTCAACGATATCGGCA 1594 36 100.0 30 .................................... TGATACATGAGCTTGTCGGTGATCCGACAG 1528 36 100.0 30 .................................... ATGTCGGGCGTCATCGTCAAAGCTTATTTT 1462 36 100.0 31 .................................... TATGGCCGGACCCGTCCCCGCAGGCCGTTTG 1395 36 100.0 31 .................................... AAATGTTACGGTGGCAAACGCTGATTTGCAA 1328 36 100.0 30 .................................... GGTTGTCTGTTACAGGCCATAGTCCTTCAG 1262 36 100.0 30 .................................... ACGCTGCACGACCGGGATATGGTGATCTTC 1196 36 100.0 31 .................................... AGGGGCGGTTCGTCGCCCCAGCCCTTGGCGA 1129 36 100.0 31 .................................... CACGCGATGGCCAGCATCACGAAACTGGCCA 1062 36 100.0 31 .................................... GGAAGCCGACATGATCCGCGCCCAGGCCGAC 995 36 100.0 30 .................................... GCACCCGACGCCCACATTACACCAGGCCCC 929 36 100.0 29 .................................... CCGCCTGAAGTCGATCCTGCATTCTTGCG 864 36 100.0 30 .................................... GGTCCCGTCGAGGTGGGCGCGGATCGTCGC 798 36 100.0 30 .................................... ATTCTCAAAGCGCGGCAGATGGGGTTCACG 732 36 100.0 30 .................................... AACAGGCTGACCAGCGCTATGCTGATCTGT 666 36 100.0 32 .................................... TCATCAGCAAGGCCGGGGCCTATCAGTCGCAG 598 36 100.0 31 .................................... CAAGCGCAGATCGGCACCGGCACGGTCCATG 531 36 100.0 30 .................................... CACGACGCCGCCGTTGTCGTTCGATCCATC 465 36 100.0 30 .................................... GCTCAAAGGCCTGCGTCCGAGGGTTCCAGC 399 36 100.0 31 .................................... CGGATGATCCTCATGGAAGCCGAACAGCTTG 332 36 100.0 30 .................................... CATCCCGGACGCGCTGCGTTATCTCGGCTT 266 36 100.0 30 .................................... GTGATCATCGAACGACCACCAGCGCGTCAG 200 36 100.0 30 .................................... GACGTTCGCATCGAATATACTTCGTCATGC 134 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================ ================== 61 36 100.0 30 AGCATAGCCATTCAGAAATCGCGGTCCAACTGCAAC # Left flank : CCCGTAGTTTCGAGGACAGGAAGCAGGTCTTGACGCTGTTCGAACCGCCTGACGCATTGTCCTGGGCCAGCTTTGGCCAAGCAGCGGCGCACTGATCCATGATCTTGAGCGGATACCGACTTATGTGGATTTTCGTGATGTTCGACCTACCGGTGGACACCAAGGAACATGCCCGCGAGGCGACAAAATTCCGCGAGTTCCTATTGGATGAAGGCTTTGAAATGAGCCAGTTTTCAATCTATGCTCGATTCTGCAATGGCAAGGAACACTACGAAACCTACTTGCGCCGGATCGAGGCGAATCTACCCGAGCGGGGAGAGGTTCACATCCTCACATTCACGGACAAACAATATGAAAACATCGTCCGATTCTCGAGTCAGCGCCGCCGGGGGCAGCGAAAAAATCCGGAGCAACTTGCTTTGTTCTAAGGGTGAGGCCGTTTTTTGGTATGCTGGACGGGCACTTTTCCGGTTCTCTTTCAACCAGTTGAGTGCTCATCC # Right flank : CTCTCTAGCCTCTCTTATTCACGACGCTCGGTTTCGGGTCCGCTCTGGGCATTTGCTGCGGCTGGCTGTATTGCGCGGACGACCGGCATCGCTGGCGTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGCATAGCCATTCAGAAATCGCGGTCCAACTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.80,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 1 121-621 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACIIY010000005.1 Sphingobium wenxiniae strain JZ-1 Ga0373325_05, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 121 36 100.0 32 .................................... GGCAACTCCATGCGGAGCGCGCCAAAAAGCAG 189 36 100.0 30 .................................... TCAGGCCATGCCGGACAGCGTCGATGTTGG 255 36 100.0 30 .................................... CATTTCGAGATCTTCGAACTCGGATCGATC 321 36 100.0 30 .................................... GTTCGGCCGCCTATGCCATCGCCTGCGTCT 387 36 100.0 30 .................................... ATCCTCGGCGCGGAGGGGGTCCGCGCTCCG 453 36 100.0 30 .................................... TCGAATTGAAGCTTTGTGATATTTTGGATG 519 36 100.0 30 .................................... TTCACTTGCACCGAACACGAGGAGCCCGTC 585 35 77.8 0 ....................A....-T.G...GTGT | A,G [609,616] ========== ====== ====== ====== ==================================== ================================ ================== 8 36 97.2 30 AGCATAGCCATTCAGAAATCGCGGTCCAACTGCAAC # Left flank : AGGTTCGGCTTAGACACCCAGTTCCTAATTCAGATCAGAGGCTTACGCCACTCCCGCCAACCCTTCAGGACACTTTTGGTGAATAAGGCGGGCTAGGCATAGTAGTGCCAGAACACTGGCA # Right flank : TACCGTTGCTGGCTGGTTCCAACTCGCTTCAACAAGATTGAAACAGCTAAAGTTCGAAAAGTGAATAATTGGTCGGGGAGAGAGGATTCGAACCTCCGGCCCCTGCCTCCCGAAGACAGTGCTCTACCAGGCTGAGCTACTCCCCGACCGTCGGCGGGATCGCTGTGCGAACCCGCTGGGCAGGCCGCAGCCTATAGAGGCGGCTTTTCGGGCTGGCAAGCGGCTGGGTACGCTTTTTTTGCCGGCTACAACAACCCCGCCGCCCGAAAGGAGAAGCGGTCGTTCCGCGCGTCGATCACATGATCCGCCAATATGATGTCGAGCGGGCGGAGATGGCGGTAGAGCGAGCGCGTCAATGCGATGTCGGACGGGCGGGGGGTGGCCATCCTGTCCTTCCTGCGCCGCTGATGGAGCGCCAGCCAGCGGCTCTTGAATTGCAGCAGCTGCCGGACGGTGGCGCGCCAGTCCTCCGCCGGTCGCAGGCGGTGCAGCGAACGCCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGCATAGCCATTCAGAAATCGCGGTCCAACTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.70,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //