Array 1 254281-250794 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH806632.1 Actinomyces timonensis DSM 23838 strain 7400942 scaffold00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 254280 36 100.0 36 .................................... AGAGCCGACGCCCCCGCGAGCAGCGCCCACGGCCAC 254208 36 100.0 37 .................................... TGGCGGTCGACCTCGCTCATGGCGTGCAGCAGTGCCC 254135 36 100.0 35 .................................... GGTTCACGCCGTCCGGTGCTGCGGTCTGCTCCGTC 254064 36 100.0 34 .................................... TGGCCATGAGGAACGGGCCCGTGTCGGAGCCATC 253994 36 100.0 38 .................................... GCGTAGAAGGCACCAACCAATAACGTCCCCGTCGTCGG 253920 36 100.0 34 .................................... AGACTCAACTGTGTGACGTACTTGGCCGCCGTGC 253850 36 100.0 37 .................................... CGTCCCAGATGAGCGTAACCTCGCACTTTATCTCAGG 253777 36 100.0 34 .................................... AGCGTTCCTGCATATCATAAAAAGCCTGATCCTC 253707 36 97.2 34 ..............................C..... TGGTCCCGCGATTCCAGGCGTTGGCCACGCTCTC 253637 36 100.0 36 .................................... CATACAGGTCAACGGTCACCGGAGTCTTTCACTCGC 253565 36 100.0 35 .................................... GTTGCATATGACGACTTGCTCAATCCGTCTCCATT 253494 36 97.2 35 ...............T.................... GTGAGTCCGGCGCCGAGGACGGCGACGCCGCCGGA 253423 36 100.0 33 .................................... ATCATCATGGTCTGCACCAGGTTGGACAGCAGG 253354 36 91.7 38 ...........C..A...G................. TCCCAGTTCTCAGTGTCCAATGCTCCGACCGCGCTGAA 253280 36 91.7 38 ...........C..A...G................. TCCCAGTTCTCAGTGTCCAATGCTCCGACCGCGCTGAA 253206 36 91.7 36 ...........C..A...G................. TTGAAGTGCTCCGGGAGCGCGTCATTGGAGTCCGAC 253134 36 88.9 34 ...........C..A...G.C............... CAGATCGACGCCGGCCCATGCTCCATATCAGCGA 253064 36 100.0 34 .................................... GGGATCACCCTCCGCATCGAGGACGCCTAGAACG 252994 36 100.0 37 .................................... ATACCCACCGCCGTTGTCAGCCCGGCAATAGCCCACC 252921 36 100.0 35 .................................... GCGAAGATCTCGGCGCTGTCACTGTAGACCTGGAT 252850 36 97.2 35 ..........T......................... ATGATCTTGGGCGACGGTGGCGTTGCATGACTGAT 252779 36 100.0 39 .................................... GCTATTCTCCGCGACACTGCCCGGGCTGTCCTCCGGGAC 252704 36 97.2 37 ........................G........... TGGTGGATGTGAGCGCTCATCGGCCACTGGCCGTGCC 252631 36 100.0 38 .................................... CTTTTCAGTGAGTCATCATGCGGCCGGGGATCACCCAG 252557 36 97.2 36 ................A................... CTGGTCGCGGGCCTCCAGCTGGGTCAAGAACAAGGC 252485 36 100.0 35 .................................... CGGCACCATGAAGTGACGATGACCGCGCAGACCGG 252414 36 97.2 34 .............C...................... TCGTCGCGCTTAGCCATCACTTGGCCCTAATGAG 252344 36 97.2 37 .............C...................... ATGTACGGCTTGTACCCGTTCGCCGTGTCGTACCAGA 252271 34 91.7 40 .............C......--.............. GGGGACCGGCGACTATAGGCCTGACGACGAGATTACTCTT 252197 36 97.2 36 .............C...................... GCCCTTCGGCAGGGTGTCACGCGAAGCGGTCACAGT 252125 36 97.2 37 .............C...................... CGGGTGGTTGAGGCTATCAGCGCAGGAGGGCGTACAC 252052 36 97.2 38 .............C...................... CCTGAGAACGCTGCTTTCGAACACCCCACTTCATACCC 251978 36 97.2 37 .............C...................... TGTTGTTGACGTGACTCTCTAGGAGGAAACATGTCCA 251905 36 97.2 35 .............C...................... TGGCGGGTGGGGTTGGTGGCGCCGGGGAGGAAGGC 251834 36 97.2 37 .............C...................... TCCACCAGCGCCGCCACCGCGACGGCCGCCACGGCCG 251761 36 97.2 35 .............C...................... GGGACGATCCCTGTTACCGGCGTGTGGGACTTGTG 251690 36 97.2 37 .............C...................... ATCGGGGGGCGGTTGTACCCGCCGTTCGCGAAGCTCT 251617 36 97.2 36 .............C...................... ACATTCGATAAGGTGGGATCGGGCTTGCCCCCCCGT 251545 36 97.2 32 .............C...................... GTGTCGTTCTCCTCGAACAGTGGCTGGATGGT 251477 36 91.7 34 ...........C..A...G................. TTCTTGGCAAACTTGAAGACCTTCTCAATGATCT 251407 36 91.7 33 ...........C..A...G................. TCGATCTGCTTGAGGCACTGGGCCCATCGCAGG 251338 36 91.7 34 ...........C..A...G................. CGTAGGACCATCTTGCCAGCGACACCCGCGAGAG 251268 36 91.7 37 ...........C..A...G................. CGTAAAAATTCGTGCCGTGCTGGTCGCGCACCAGGGC 251195 36 91.7 35 ...........C..A...G................. TGGCGTCCCGCAGGGCTCAGGCGTTCAGGTTGTGC 251124 36 91.7 37 ...........C..A...G................. ACGTGCAGTCCACGGACTCGGTCGGCGAAGGTGTTCT 251051 36 91.7 35 ...........C..A...G................. CCTGTGGCAGCCGCCGTCCCGTCGCCGGCGAACGG 250980 36 91.7 35 ...........C..A...G................. CCGGAGCACGGCATCTCCCCCGCCGAGGGGGCTGG 250909 36 88.9 44 ...........C..A..GG................. CGCGCCTCTGCCTCCCCCGTGCCCCCGGCGCGCAGTTCACTCTG 250829 36 72.2 0 A......CGG..AA.....G...G.....A.....T | ========== ====== ====== ====== ==================================== ============================================ ================== 49 36 96.0 36 GTTGCAGTTCCTTTGGGAACTGCACTTCATTGAGGC # Left flank : TACAAGGGCGTGACGGTGCGCTGATGCGCGACGATGTGAGACGAGTGCTCGTGGCCTACGACGTTCCCTCCGACCGGCGGCGCGGCCGTGTGGCGAAGACGCTCCTCAAGTACGGCGACCGTATCCAGTACTCGGTGTTCGTGGTCGACTCCGCCCCGGCCAAGCTCATGCGGCTGCGGGAGGAACTGAATGGGATCGTCGATTCGGATGAGGACTCGATCCTGCTGTGCGACGTGGGGCCCCTGGTGTCGGTCGACGACAAGCGCTTCACCTATGTCGGCCTGACGCGGACGATCACTCCTGACGGGCCCCTCATCGCCTGATGCGAGCGCTGCGGTGGTACGGGGACCCCCGGGGAGCGCTCGCGGCCCAAAACCGTTGAGATTCCAAGGAAGGGCGAGTAGGCTGCCTGCCAGCCGAGTGTCTCGGCCGCCCCGACGGCGGCAGCGCTCGCGGACACCCGCCAGAACCCTTGAATCACAGCCGAATCTGACGGGGCG # Right flank : CAGCGTGGGGAGACGATTGCGATTCTTGTTAGATGATGCCCCTATTGTTGAGGCTGGCTAGGAGCAGGTAAATCGCTATCGCTGTTCCTGCGCCCAGGAGGAGAGCCGTGAGGTGAATAGCAATGAGGTTTAGGCGCCCTCGTGATGGCGATAAGTGTTTCAGTAAGTTCGAGAGGTGGTGGATGCCGAGTATCGCGACTGGCGGAAGGGTGAGGAGGCTCACGAGGGCGCACAGGCGCATGGCGTCATACAGCGTTCTGGACGTGGGGTCATGAAATACCGCCTGCGCGTACAGCCACGAGCCGCTGATCAGTAGTGTGACAGTGAGGACCCCGCACACGAACGCGCAAGCGGCGCTGATGATCAGCGCCCGCCTCCACGCGGTGTGGTCGCCGGTGTTACTCGCGGCAGCCTGTGGCTTGATCCCCATGCCCACAAGCGTATCCGCGCGTCGCAGGGGCGCACCCCGCAACCGAGCCGATGCGGGGAGACCCGGCATG # Questionable array : NO Score: 2.52 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.46, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGTTCCTTTGGGAACTGCACTTCATTGAGGC # Alternate repeat : GTTGCAGTTCCTTCGGGAACTGCACTTCATTGAGGC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA //