Array 1 116735-118914 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013149.1 Lactiplantibacillus plantarum strain MF1298 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================================ ================== 116735 36 100.0 30 .................................... AAAATGGATTTCTGAGCATTACTGTCCGAC 116801 36 100.0 30 .................................... GACTATACCAATGAGGTCGAAGCATGGTTA 116867 36 100.0 30 .................................... CACAAGGCCACCGAGGAAGCCGGCGAGCTA 116933 36 100.0 30 .................................... TAGGTTTACTCATGGTAAATCCTCCTATGT 116999 36 100.0 30 .................................... AAAATAAATTTAAGGTTGCGCAACACAATG 117065 36 100.0 30 .................................... AACTCATCATAAATGACGTCTTTTACCGAG 117131 36 100.0 30 .................................... TTAGGTTGAGCTGGATCGGGATCAGGATCG 117197 36 100.0 30 .................................... TCTGTTGTTTAATTTGTTTTAGATTGTTAC 117263 36 100.0 30 .................................... ACTAAAGCCGGGGTATACAGCCCCGAAGAA 117329 36 100.0 30 .................................... AAAATAGTTCGACGAAAAAGCCGAAAGAGA 117395 36 100.0 30 .................................... GCGGCCACGACCGCCATGGGTGTCAGCGCC 117461 36 100.0 30 .................................... TCGGATAACTTAGCGGCGGCGTATCCCTGC 117527 36 100.0 30 .................................... ATAGTGACAGCATCTGTTTTCGGACCAATC 117593 36 100.0 30 .................................... GAGGCTTGCACTAGTGAGTTCAATCGTTAT 117659 36 100.0 30 .................................... TGTCCATACGAGCAGCGTTGGCACTTATTC 117725 36 100.0 30 .................................... GTATTATTATCAACGTCCCGCATTGCGTTA 117791 36 100.0 30 .................................... AGGATATATGAAATTAGTACATGTACTAGT 117857 36 100.0 30 .................................... ACGTCTTTCAGCCCAGTAAACTGCTCAAGT 117923 36 100.0 30 .................................... TTGAATACCATTCCTTGTTTATACTCCATC 117989 36 100.0 30 .................................... AGTTCATAATCATATGATCTAAGTGACGGT 118055 36 100.0 30 .................................... GGCCGGGTTAATCTTAATGTTTTATGTTCT 118121 36 100.0 30 .................................... CAATCAGAAAGAAGATGACGACTATAATGC 118187 36 100.0 30 .................................... GACTTATACCAGCAGTACCGAAGACGGTTA 118253 36 100.0 30 .................................... AACTGGGAGCGGTCAACACCCCAGGCTGTG 118319 36 97.2 30 .............T...................... ACGCAAAGCCAGCCCTAGTCATGAGGTCAT 118385 36 100.0 30 .................................... GTTGCAACTTTATCCTTGTCACTTTCAACA 118451 36 100.0 60 .................................... CAATACCATAGTAGTCAATTATTACACGTCGTCTTGAATAGTAGTCAATTATTACACGTC 118547 36 100.0 27 .................................... GCCAAACAACATTGCAGAGAGCTAGTG 118613 36 100.0 30 .................................... GTGACGTGCTCCCATGTGACCCGAATTGAC 118679 36 100.0 30 .................................... CGACTCTAATGGATATTTTCAATCATAGCA 118745 36 97.2 30 ........................T........... GATGGTGCTGTTGCACGTGATCCCGCGCTT 118811 36 94.4 30 .......................G...........T AGCATAATGTATTATGTAACATATTATGTT 118877 36 75.0 0 ..........ACG.C..C.........T..C.C..T | AA [118898] ========== ====== ====== ====== ==================================== ============================================================ ================== 33 36 98.9 31 GTCTTGAATAGTAGTCATATCAAACAGGTTTAGAAC # Left flank : CAGTCGATTTGAACCGTCTTTTTCTAAAGAAAGTGCAGACCCAAATTATCAAGTTAATGGCTGATGATCGGCAAGTAGCGGTCTTAGATGAAAATCGTAAAGTAGTTTCGCAAGTAATGGAAGCCAGCTTCTTACTAGACTTACCGTTAGATGTTGACGAATCGCCTAGCCTAGAACAAATATTGAAGTTTACCGGTATTCACTTTCCGACGGAGCTTATGAATGACCCAAGGGCAATACTGGAGGCACTCGTTCAGACGCATGTTGAGCTGGGCTTGAAACAAAAACTGGTGTTGACTAATATCAGCCATTACTTAGATCAAAAACAATGGGCGAGCTTTGAGCAATTAGTGCATGATTTGGGCGCAACTGTCATTGTTATCGAATACTCAGAAATAAATCGAATGGAAAAGTTCAAAAATAGTTGTTATTATTATGTTGACGAGGATTTAGTAGACTGGCGTGATATGAATTAATGAGTAAATGATGTTAAAATGCTG # Right flank : TACTAAAAAAGGCTCACCAACTAAAACAGGTTGGTGAGCCTTTTCGATTTATTGACTAATTACTAATCAATCACGCCATCTTTTCCCATCCATCGGAACCGAATAAACTTCCCGACCTCGGTCACAATCAAGACGACGATCCCACAGATAATCGGGATGCCCCAACCATACCAGAAGTTGATGCTAGTCGTATGGAAGACGGATTGCATGAATGGTAGGTAAATGATTCCCAGTTGTAAGAGAATCAGAATACCAATGATGTAGAACGCCATCTTATTTTGGAAGAAGTACTTGGAAATGACGGGGTGGTCATTCCGCAAGTTGAAGAGGTAGAAAATCTTACCAAAGATGATGATGTTCAGTGACATGGTACTACCGACGACATTTGGTAATCCAAGTGCGGTCAAGTAGTTGTAGGCGAAGATCCCCAAGCCAGAAATTAGGAAGGAGACATAGCCGATTTCAAAGTAATCTAATTTTGACAACAACCCAGACTTAAC # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTGAATAGTAGTCATATCAAACAGGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //