Array 1 648-97 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS499743.1 Anaerostipes caccae L1-92 strain DSM 14662 Scfld_03_24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 647 31 100.0 33 ............................... CTGAATTAACGGTGGCCACGTTGGTAACATCCT 583 31 100.0 33 ............................... CCAAACCGCCGTCGTCCATCCGTGACGCACCAT 519 31 100.0 35 ............................... TCGAGGAGTCACTTTTTTCCCCGTAAGAGTAGAAA 453 31 100.0 34 ............................... TTTTGGAGTAATTGAAATCTTGGCCAGCCACAGC 388 31 100.0 35 ............................... CTGAACCCGGAATCTTTATTTCCCCTGTGAGAGTA 322 31 100.0 33 ............................... CACTTTAGAGATTTAGTTAAAAAAGGAGTATAA 258 31 96.8 35 ..............................A TTAAGCCATCAATCCAATACTGCGGCTGAACGCCG 192 31 96.8 34 ..............................A ATTGGATTTGTTTTGCCCAAGATATTTGTTTTTC 127 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== =================================== ================== 9 31 99.3 34 GATAAACAGTAACAAGAGTTGTATTGAAATT # Left flank : ACTATGGCAAAATAACACCTTCTCTTGTTAAGCTGTCATCTTCAGCAGATTCTGCGGCCATGTTCCACATATTCCAACGATAATTTTTTAGCACGATTGGAGGAGCCCATTTCAAAACGTGACGAAAATAGTAATAAAAAACTGTCGTTGAATCGTTCCGTTTGTTTAATGGATACTTATCCAGTAGATATTGCGTCCATTTTCCATATGATTGGAGTGAGGCATTCTAAGAGCCGAACGGAAATCATGCGGAAAATGTCATACCCATAGGGCACACCGTATTTCATACCCTTTGGGTGGCGCGCTCTGCGCGATGAGGTATACTGATTTTCCAACCGATAAAATTGATAATTACATACAAACCGCAGAGGATAGCCATTTGAAGGGGTATTGGAGAAAAATGTGAAAAAATTGATGACGGTTGGGAAATATTTAGAGAAACGTTGATTTTATCAGGAAAACTGGATATAATGAAATGGAAGAATGGCTTAAAAGCGTTG # Right flank : TTGATTGCAAGATCAAACCGTTTCATTACAGCCAGATAAACAGTAACAGAAATAAGATATACCCTGATAGTTAGGCAAAGAAAAGGAGTCAATGTCT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAACAGTAACAAGAGTTGTATTGAAATT # Alternate repeat : GATAAACAGTAACAAGAGTTGTATTGAAATA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.19%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 1 109979-109755 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS499731.1 Anaerostipes caccae L1-92 strain DSM 14662 Scfld_03_12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 109978 29 100.0 35 ............................. ATATCAGAGTTTTCAACATCGCTGACAGGGATCAG 109914 29 100.0 37 ............................. TTGTGACCCCTCCATCCCCTATTACAATGCCTTGGAG 109848 29 100.0 36 ............................. GAGGTTATAGACGATAAAACAGTCGTCTATATTACG 109783 29 86.2 0 .....................CC.A...G | ========== ====== ====== ====== ============================= ===================================== ================== 4 29 96.5 36 ATAAACAATAACAAGAGTTGTATTGAAAT # Left flank : TTCTTTTCCCTGGCGCATTACTGCACCAAGATATTTTATCATGGACAGGCGATTTCACAAGATGCCTTGGACACTTATTGTTAGGCGAAAAACAAAAATAAAACGGAGGTAATAAATATGAATAATATAATAGAAAAAGCACAGGCAATGGACCAGTTTGGCAACAACCTTCCCGATGTAGAGCAGGGGGGGCAAATAGAGCTTGGTGAGATCTGGGACGGCACAGGAGACGTGCCGCAGGAGTCTTGGAGCATCCAGATCACGGACAGTGATTGGATCAATTACTGCTTTGAGATCGTAGAGAAAAACAGTGATCCACTCAAGACTGTAATCAGGATCACGGACATAGAACTGATATAATGTATAGGCCCGGCAGGTAGCCGGGCATGGCGTAAAAGCATGGGATATAATAGCTGTAAGACCCTATAAGAAGCGGGTAGTTTGTCGTAAATTTGTCGGCAGTGTCTTACAGACCGCATAAAACCGTGGTTCCGTGTTTC # Right flank : CATTAGTGAAGTTCAATAAAACAATATTCTGCTTAAAATTAACAATCTTTCTTTATCCCAAAGATCCGGTTCCCCGGATCTTTATTACATAGTTACAAGGATACCTGATTTTTGACAGAGATCTTTTTTTGACCAGTTACAGCCACGATGATCACCAGTTGCGGAATAGGATCCCGTTAAGGTATAATGATATATATGACCAGCGGATATAGATGCAATACAAAAGAGGGATTTGAATGTTAAACCAACGACAAATTGAAATTTTATTAGAATTCTGCAATCACTCCGATGAGTTCCTGACTGCGTCTCATTTTGCAAAGAAACTGGACGTGAGTCTCAGGACCGTTCAGGGGGACATGAAAGTGATCCGAAAGGAACTTGCGGATGAGACATGTGCGGAATTGGTTTCCAAGGCTTCCAAGGGAAGCTGTATCCAAGTGAAAAACTATGATGAGTTTTCCGCATTCGTGAATTCTCTGTACCAGCAGTACACAACAGTA # Questionable array : NO Score: 8.68 # Score Detail : 1:0, 2:3, 3:3, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAAACAATAACAAGAGTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA // Array 1 38578-37769 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS499727.1 Anaerostipes caccae L1-92 strain DSM 14662 Scfld_03_8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 38577 30 100.0 34 .............................. TCCTCCTATCTGCCGTTCAAAGAGCTGTTTTTCC 38513 30 100.0 35 .............................. TTGACCCACTGTTCTCCGGCCAGCCAGGCGATCAC 38448 30 96.7 34 .........................A.... GATATGATGTTTATTGGTCGGATTACCGATAATA 38384 30 100.0 35 .............................. TCCAATATTTGATACTCAAGGCCATCTACATTTAT 38319 30 100.0 34 .............................. ATTCAATCCGTTGGCTCCTCTCTGACAAGGAAAG 38255 30 100.0 36 .............................. TATAATCAAAAGATAGCAATTCAAACGTATCAAACG 38189 30 100.0 36 .............................. GCCTTGCACATTGTTTTATTTATATCTTTCTTAACT 38123 30 100.0 34 .............................. TGGCATCGTTCACGGCCTCCTCAGCGTCTTCCTT 38059 30 100.0 35 .............................. TAGCCTCTGCGCCCTGAGACGCTCTTTTGGAACTG 37994 30 100.0 36 .............................. ATTCCTTCCCATCCTTTGTATATTTCAGGGAGAAAT 37928 30 100.0 35 .............................. TCGAGCCAGGGAACGCATTTGGCAGCACAACGAAA 37863 30 100.0 35 .............................. TCTGCAGTTGCATAAGGATCATCTTTTGCCACATA 37798 30 80.0 0 ...A..C............CA..C....G. | ========== ====== ====== ====== ============================== ==================================== ================== 13 30 98.2 35 GATTAATAAAAACATTAGATGTATTGAAAT # Left flank : GGGCACACCGTGTTTTATACTCTTCGGGTGGACGCGCTTTGCGCGATAAGGTATGACATTTTCCACATGATTTTCGTTCGGCCCTTAGAATGCCTCACTCCAATCATATGGAAAATGGACGTAATGTCCGTTGGAGAAGGCCCGCTGTCAAAAAAGGTGCCGCTTTTCGAAAGTTATTTACCGCTATTGGAGGAGCGCATTTCAAAAGCACGACGGAAATAGTGGTGAATAACTCATAATATATGGGGAGATCAGTGGATCGTCCTGCTGAAGATACTGTAAATTAAGTCTTGAGATTGAGTTTAATTTCACAAAAAGGAAGGCGTTTTCCCAACCTTGTTTTTATTAGAAATGGAAGAAAGCTCGGTTTTATGCGGGTTAGGAGAAGTTATGGAAGGAAATTGAAATTATAGAGCGGAGGTTGGGAAAATATCTAAAAAACGTTGAAAAATAAGGGTTTATAGAGTATCATGAAAAATAGAAATGGCTTAAAAGCGTTG # Right flank : TCTTTTCTATTACATAAATTTTCTACAATTTTATCTTTAAAATATAGGTGAAGAATTTTTTTGGAATTTGTTGAGAAATCAGGATGATTGTAGTAAAATAGTAGATAGAATGGTTAAGGATTTGGGGATTCAGATATAAATATGATGAATGAGAATGTCTTACAGAGATATGGGGACCAATTCGCTTCAAAATGGGATAAGAAAAAGAATAGTAAATTCATTAGAATAGCTGAAGATAGCTGTTCTTACAAGTGTGCTTTGCATAGATATAATTAGACAGAAGTTGTAAATATACAATTTCTGTCTTTTTCTTTGGTTAATAAAGGGGATGAGAGTCAGTTCAACAAAATGGGGTATGGTAATTATAACTTGATTCTTAGTAATGTAGAGATAAATTTGTATGAAAAGAAAATGTAAATATTAAACAAAAAGGAGAAACAGCTGTTATAACAACGCTGAGTATTGATTATGAGATTTCTAGTATTTTATCGAAATGAAAC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:0, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAATAAAAACATTAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 2 48609-48183 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS499727.1 Anaerostipes caccae L1-92 strain DSM 14662 Scfld_03_8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 48608 30 96.7 36 ......T....................... ACTGCTTTTCCATTCCATTCTGTCATGATACGCCCT 48542 30 96.7 36 ......T....................... TACACTAGTCTGCAGTGATAACTATCCAGCGATCAC 48476 30 100.0 35 .............................. GGGTTTTTAGAAGATCTTGCAAAAGATCTTGTAAA 48411 30 100.0 36 .............................. TTATTATCAAACGCCCCCAGCCAGTACATTCTCCCT 48345 30 100.0 37 .............................. CACATGAATTTCGGTCGTGCACATAAATTGCGGCACC 48278 30 96.7 36 ....C......................... TGATGAATTACTACACCTCCAATAATACTTGATTCC 48212 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 98.6 36 GATAAACAAAAACAAGAGTTGTATTGAAAT # Left flank : CGCAAAAGCCAGGCGGTGGTTTTGATTGGGGTGACTTATCAGCAAAGAGGGCTGAATGAGTGCTGTGGTTGGTGTAATCAGACAAACTGCCAGGGCTGCAGGGAGAACCAAAGCGTCTGTGTATTTGATCCGGTGGATCTGGGAATCGCACTGGGATCGGCAGTTAGTGTGGCATCCTTAAACCATGTGGACAACCGGATCATGTTTTCTGTTGGAAAAGGAGCACTATCCTTGGGGATGCTGGGACCGGAAGTGAAGATAATCCTTGGAATTCCATTGGCTGCGGCGGGAAAAGCGCCATATTTTGACCGAAAATAACGATGTTTTCCCAACCGGCTAAATTTAAAAAGTGGTCCAAAACGTTGATTTTACAGGGGTTGCAGAGGATTTTTAGGATTAGTTTTGAAAATGGACGGCCGGTTGGGAAAAAAGCTGGAAAACGTTGAATATATCTAGGTTTAGAGATATAATGGAAATTGAAGAATGGCTTAAATACGTTG # Right flank : ACACTTACCTCCTCTTTTGTCAAAGGACGTCCACAGATAAATAAAAATAAAATGAATAATAGATTGCTTATCTTAATTTGAATTGTTTGAAAGTACTATGAAATGTTGTATTATTTTGAAAAATATAGTAAAATAGAACAATAGAGTGGTTTGTGTATAAAAGCTACTAATGAATCATTCCCTCCAGGGCAATCGTTACGATAGGTACTATCAGCATGTATACGATACGAGGGTGCATACAAAAGAAAGGGGTGGGGCAGTGGATTTGAAAGTTTTTGAAATTCGGCTAAAAGTATATCTGTTAGAAGATATACCGGTAGAAGCAGTTCAAAAGAAGACAGCCGCACTAATTGACATTTGTCTGAGCAGAGACGAAGCACTTCTGAAATTTCATGAGACGAATCAATTTAAGAATTATTCTTTCGGAAATCCATATCCATTGGAAAAGGACAAAATTTATAAAAAGGATAAGGTGTATGTCATAACAATCCGCACCATTG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:0, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAACAAAAACAAGAGTTGTATTGAAAT # Alternate repeat : GATAAATAAAAACAAGAGTTGTATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 3 111763-111535 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS499727.1 Anaerostipes caccae L1-92 strain DSM 14662 Scfld_03_8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 111762 30 100.0 34 .............................. CTGCCATTGCGCAGGGAATTATAAACTCTATTCC 111698 30 100.0 38 .............................. ACCCCATAAGATTCACTTGTCCCATAAGATTCGTTTTG 111630 30 100.0 35 .............................. AATGATACCTGCCTCTGAAATAAAAAAACGTTTTT 111565 30 80.0 0 ...............AA...A.T...GC.. | A [111540] ========== ====== ====== ====== ============================== ====================================== ================== 4 30 95.0 36 GATAAATAAAAACAAGTGTTGTATTGAAAT # Left flank : GGATTACGACGATGAAACCATACAAAAGTGGCTGGATAAATTCTACTGGCGGTTCTTCAGCCAGCAGTTTAAGCGCTCTTGCCTGCCGGACGGGCCGAAGGTGGGAAGTGTAGCAGTGTCTCCAAGAGGGGATTTGAGAATGCCGAGCGATGCCAGCGTGAATATCTGGCAGAAGTCATAGATAAGGATTGGAGCTGTGCAGAGTTTTGCATGGCTCCTTTTTTTGTTATCAGATAAAATCTTGCTATGGAATGGAAAGATCTCCAGGCAGGTTGGAAAATCGCATTTAGTGCACAAAGTGGGTAAGTCTCTCAAAGAGGAGGATTTTTCCCAATCTCTAAAAGCAGATGAATGCCGGAAAGCCGCATAGAATAAGGGAGGGAAGCTATTTTGGAAAAGATAAGAGAAAAATTTATGGCGGTTGGGAAAAAATTGAGAAAACGTTGATTTTATGCGGAAAGGCGATTATAATGAAAACAAAGAATGGCGGAAAAACGTTG # Right flank : ACAGAAAACAAACAGATTTGTGCTGTTGTTGTAATATGATTCATTCAATGAATGAACAGAATTCTGTGGAAATATCCATACACAGAGTTCTTATTTTTTTGTCTTTATTTCTGTGCAATCTTTATTAAGTTTTATTTTCTTTTTATTTTTACTTGCAAAATGAAAGTCAATATGATAATATACAAGTACAAAGTAAAAGATAATAAAAGAAAACAAAATGGAGGAGTCAGAAATGAAGTTAAGTGCAGATCAAATAGCAGGCATGGTAGACCACACAAATCTCAAAGCCTTTGCCGATGAAGCAATGTTCGAAAAATTATGCAGCGAAGCCAGAGAATATGGTTTTAAGATGGTAGCCATAAATCCTGCACAGACAGAGCGGTGCAAACGCCTTTTGGAAGGATGTCCGGTTCACGTAGGGGCAGCCATAGGATTTCCGCTGGGACAGACAACACTGGAATGTAAAGTATTTGAGACAAAGGATGCCATCGAAAAAGGCG # Questionable array : NO Score: 5.61 # Score Detail : 1:0, 2:0, 3:3, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAATAAAAACAAGTGTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 121739-120132 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS499735.1 Anaerostipes caccae L1-92 strain DSM 14662 Scfld_03_16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 121738 30 100.0 35 .............................. AGATCCGCCTCCAAAAATGCAGAAGAGATCTCTGC 121673 30 100.0 35 .............................. TCTCTTCTGATACCTTATCCGGCGGGGCCGTCACA 121608 30 100.0 35 .............................. TAGTTAGAAGCGATAGCTTAACCAGCGGAAAAACA 121543 30 100.0 36 .............................. GCTGATGCCGCTTTAAATTGGGCATTGGCCAGCTTG 121477 30 100.0 37 .............................. GTGCTCGTTCGTAGCGCTCAATCGACACTTGTTTCGC 121410 30 100.0 35 .............................. GTCTTCTGCCAGCATGTCGGCCTGTGATGCAAGCC 121345 30 100.0 35 .............................. GCGTATGTTTTTCGTTTAATTACTTGCCCATCTTT 121280 30 100.0 37 .............................. AAGGAATGGGGAATTGAATAAGGCAATTAGTAGACAG 121213 30 100.0 35 .............................. TACAAAGGAGAAGACGTTCTCTGGCCTTCTCCTTA 121148 30 100.0 36 .............................. TTTTTTGCAATATTGACAGACTTTCTGATCTTGCTC 121082 30 100.0 36 .............................. AGTTTAAGTCCCTGTGCAAAGTAGCTGCCAGATTTT 121016 30 100.0 36 .............................. TAGTTCATTGAATAATACCTCTTCTTGTGCCTCTTT 120950 30 100.0 36 .............................. AAAGCTACAACTGGGAAGACGTTGGCCAAAGCAATG 120884 30 100.0 36 .............................. GCGAGAGATTATGAATGCAGTGAATGATGCCGAAGT 120818 30 100.0 36 .............................. TCCGGTGGGGCCATGTCCCTGAACATCATATTTCCA 120752 30 100.0 35 .............................. GATCCTGCAAATCATCAACAACCGTTTTAAGAACC 120687 30 100.0 35 .............................. GCATTTAAGGTCACCTCCTCTTCTATTTCAACATC 120622 30 100.0 36 .............................. TAGATTTCTGTTTGCAGATTTTTAAAATTCAGTAGT 120556 30 100.0 36 .............................. GATGCCACAACGAAGAGCATGAGCGATTCGGAAGTA 120490 30 100.0 36 .............................. TTGTAATATGCTTGCTCTTCATTTAGCTTTTTCGAC 120424 30 100.0 35 .............................. AAAGATGTTTCTGCATCTCCCGGTAGATAGAAATA 120359 30 100.0 34 .............................. GTAGCAACAAGCGCAATAGTAACAAACCGCACGA 120295 30 96.7 37 ..T........................... AAATCAAAGAAGCAAGAAAAAGGCTTGGGATTGATTC 120228 30 100.0 37 .............................. GATTTTAAAGGATGCTTGGAAGGCGGAAAATGTATTA 120161 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 25 30 99.9 36 ATCTTAATAGAAACATAGTGGAATTTAGAG # Left flank : GGGGAAAAAGAGTATGAAGGGTTTAAGATATGGTGGTAGTTTATGTATGTAGTTTTGGTTTATGATATTAGTCAAAGTGAAAATGGACAAAAACGCTGGTCAAGGGTTTTTAAGATATGTAAGAAATATTTGTCACATATACAAAATTCTGTTTTTGAGGGCGAGATATCCAAGGTCCAGCTGGTACAATTACAGCAGGAATTGAAGCCTTATGTGGACAAAGATTTAGATTCCGTCATTATTTTCAAAAGTCGTCATGAGAGATGGCTGGATAAGGAATTTTGGGGGAAAGAGGAGGATAAGACTAGTTTTCTTATATAAGAACTGTCGACCCTTGGTAGTGCAAAATTATAGGGAGATCGACAGTAGCGAGTAACTTAATAAAACAGGGACTTCATGCTTATATAATTTGTATCTTTGTGTTGAAAGTTAATGATTATTATGGGGTCGACAATTTGTAGGGGTTTAAAGGTGAGAAATAGGGGCTTCTAATGTAACGG # Right flank : CAAGCAACTTGAATATTAAATAGACGTTGCACAGATTTTTATGTTATTATATTATTATATCCATGCACATATTCAGCAAGGAAGGTGATGAACATGACAAACGAGGAGCAAATACTCTCTATACTTACAATTCTATCTAAGGATGTAAATGCATTATCTAAAGATGTATGTGAGATAAAACGAGACATGAAAGATGTTAAACAGCGTGTAACTAATCTTGAAGTTACTCAGGAAACTGAGATTATCCCACGTTTGAAAGATATTGAATCTTGCTACCTTGATACATATAAACGTTATCAAGACGGAAGTGAAGATATAGATTCTCTTAAAACGGACGTAACAATGATTAAGCGTTTTTTAGCACAAGTGAGATAAATAGGTATAATATAACATATATAACTCGTGTAAAGTCTACTAAGGCTTATACATGGGTTATTTTTATCTTAATAGAGACATAGAGGAATTTAGAGATTGATTGGTTTGCAATGGTAGTACAATTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTTAATAGAAACATAGTGGAATTTAGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 2 131324-130570 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS499735.1 Anaerostipes caccae L1-92 strain DSM 14662 Scfld_03_16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 131323 30 100.0 37 .............................. GACATTATCATCACAAATAAAATTCCCTGGGACTTTG 131256 30 100.0 34 .............................. ATTCTATATTTCATTTTTTATTCCTCCCTTCTGC 131192 30 100.0 37 .............................. GTTAGGCATCCTGTTTTAGCCCGCTCCGGCGGGCAGG 131125 30 100.0 36 .............................. TTTTTATCGAATGCAAAGCTATAAAAGGGGATAAAA 131059 30 100.0 36 .............................. GGTGGTTTCGTAATTCGTAGATAATTTCGTAATCGG 130993 30 100.0 36 .............................. GATTCCAATACGCCGTTTTTAAAGAGCAACACATAT 130927 30 100.0 35 .............................. GTACCAGCCCCTGAGGTTGCACCAGTATCCATCGC 130862 30 100.0 36 .............................. TATGACTATGAGGAGGCGTTCAATCAACAGATCGAG 130796 30 100.0 37 .............................. TCCGTTCTTTTCTTCTACAATGGTGTAGGCTTTTTTG 130729 30 100.0 36 .............................. GAATATGCCGGGTACAATATCTTTAACGGAGAGTTA 130663 30 90.0 35 ...........A............C..A.. TAGTTATATCCTTGGATCGCCACTTTGATATGGTC 130598 29 86.7 0 ...........G...T.........-...A | ========== ====== ====== ====== ============================== ===================================== ================== 12 30 98.1 36 GTAATAATAGATCCACATTGGAATTTAGAG # Left flank : TTGAGGAATCAGGGGGTTGTATATGCCTCTTTTAAATATGGAGAATTTGAGGGAGAGCGGAATGGAAGATACTTTACGGATTTGAATGAGGAACGACTGCACAGATTGGCAGATGAAGCTGGAGTTTTTATTGTTGAGGAAACATGGATCACGTCTGATGTAAGACCGGGGAGAGATGAAGAAAAATGGCTGAATATGATTTTGAAGAAGAAAGAATTATTTTGAGAGTTGATTCAGAAGGTTCTATCGAGTGTCAGATCATAGATGTTATAAGAAAGATAATCAATTAGGAAACGGTTGATCTGTAAGGATGAGGGACATTCTGTCAACCTGTTATAATGTAAAAATACCAGGGGGTCGACAACGGGCGGAATAGAGGCGTGAAATGTAAAAATTATAAGCAGGGTTGAAGGTTAAAGTTATGAAAAATGCGGTAATCTTTGCAGGCCGACAAATGGGGGTTGAAAAATGCTTATTTTTGCTATATTGTGAATGTATGG # Right flank : GACTAAACCGTTCTAACTCTGAAATGTGTTCGGTACAAGTAATAATAGAAATATAAAAGTTTGAATGAACTTAGATAGCAAACAGGAAGAAGTATGCTGTTAATATTAAAAATACGGAAACAATGTAAGTATTGTCACCGTACAAAATATTGCTTTTCAGTTCATTATAATTTTTTAAAATATCCACTATGGCCTATTAGTACTATTATAGAATTATTATATACTCTAAATCCCATTATGTATAAACTATATTATTAACCTATTTGATTATAATATAAAAACTTAACTTATTCAAATTTTTTCATTTTAAAATAAATAGCATTATTATATAAGGTTTAATATTGACAAATATAATAAGTGGTAGTATTATACAGATAAAGGAAGCAAAAGGAGGAAAATAAATATGCGTCTAGAGTTACAATTGGATCTTGAAAAGCCTGAACTAAGCAAAGATTATAGAAGAATTGTATTGTCGTATTTAAAGTTTGCGCTTAGCGAGT # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAATAATAGATCCACATTGGAATTTAGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.20,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //