Array 1 7066763-7069513 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007574.1 Streptomyces albulus strain NK660 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================================================================================= ================== 7066763 37 100.0 37 ..................................... CTCTCGATGGGCCGGCACCGGGTGGTGCCTGGCGGGT 7066837 37 100.0 37 ..................................... CCTGCCGTGGCGCCGTATTGGTCGGACGCCACTCGGG 7066911 37 100.0 37 ..................................... CCACATCAGCGTGAAGGAGGCCGCGCGCTACCCCGGC 7066985 37 100.0 37 ..................................... CACCCACCAGAACCCGCAGGCAACAGAGGAGTCGAGA 7067059 37 100.0 36 ..................................... GACGTGGCCGCGGGCCGGGAGGTCGACGCGGACGCG 7067132 37 100.0 36 ..................................... TCACCCACGCTAGCGATGTCAAGCAAGGGCACCCGA 7067205 37 100.0 37 ..................................... CGGCTTCTCCTGGTCCTTGTCCTGGACCTTGACGAGG 7067279 37 100.0 35 ..................................... TCAATAATCCCGTCGTCCCAAGCAGCGATCATGTG 7067351 37 100.0 36 ..................................... CATGATCCGGGCGCTCGCAGAGCACGTCACCGCCTG 7067424 37 100.0 36 ..................................... AACTAAGCCTGGGGTTACTTGCGAACCGGTGGGCCA 7067497 37 100.0 36 ..................................... CGCCTGAGGCGACGGACAAGCACGGGATCACGGATG 7067570 37 100.0 36 ..................................... CTTCTCGGGTCGGGCTTGCCGCCGCGCGGGGTGCCG 7067643 37 97.3 37 ...............G..................... GTCTGGGTCCGCCTGCCCGACGGGACGGAGCGCCAGG 7067717 37 100.0 37 ..................................... ACGCACGTCCGCACCGAAGCACCAGCCCATCGCCGGT 7067791 37 97.3 37 ............T........................ TGGAAGCCCGCCAACACGGCCTCCCGCTGGTGCTCAC 7067865 37 100.0 37 ..................................... GCTCCCACGTGTAGCTCAATGTCCGGCCGACGCGATA 7067939 37 100.0 36 ..................................... CCTACTTCGGGCCCCGGATGGCGCGCGCGGCCCGGT 7068012 37 100.0 35 ..................................... CCGACAGCGAGCCGGGCGACGAGACGCCGCTCGTG 7068084 37 100.0 36 ..................................... CCAGGATCCGCGGCCGGTCGGGGTCTCCTCGATCAG 7068157 37 100.0 37 ..................................... TTCCTCATCGTCGTCCATGCAGGCGCACAACGCGGCG 7068231 37 100.0 36 ..................................... ATCACCGCCCTGCACGCCGCCAGCGAAGGCGCCGAC 7068304 37 100.0 37 ..................................... GACGTGATGCTGCCGTGCCCGCACGACGACGAATGCA 7068378 37 100.0 36 ..................................... CACCATCCACGTGCGCGACGAGGCGGGCCGGATCGT 7068451 37 100.0 36 ..................................... CCCTACGCCGAGGAACTCCTCACCCGCTACGCCGAC 7068524 37 97.3 37 ..................T.................. CTCGCTCAACACCACGCCGTCCAGGGCGACCTGCCAG 7068598 37 100.0 35 ..................................... TCGCCGAGGTCGACCGGCTTCGGGCAGAGCGGGAC 7068670 37 100.0 36 ..................................... TACGAAAGCGTTCGCGAGCAGGTCGAACGAGACCTC 7068743 37 100.0 36 ..................................... GAGTGACCGCGGCACGGTGATCACCGGGGGCCGGCT 7068816 37 100.0 36 ..................................... ATGGCCGGTGCCCAGAAGCCGGCGCGGGGTGCTCAT 7068889 37 97.3 37 ...........T......................... GTCACCGCCTTGAGCCAGAGCACCAGCACCAGCACGG 7068963 37 97.3 37 ....................T................ GTGATGCCGTGCCAGGCGAGGAAGCCGGCGACGACGA 7069037 37 97.3 36 ...................C................. AGGGACGGCCAGGAGTCGACCAGTGCCCGGCCGTAC 7069110 37 86.5 36 ...........T.......A.CA...A.......... ACGTTGGTGTGACGACGGTGTGCCGGACGACTTCGA 7069183 37 83.8 35 ........T.C........A..A.G.........G.. ACGTCCTGGTCAACGATGTCAGGGGGCCGGGGGAA 7069255 37 83.8 109 ........T......G......A...C..G....G.. TATGTGGACGACTTGGGAGGGCAGTTCTGCACCCTCGCGGCGGTCACCCGTCGGCGCAGCTGGGCTTCGGAGCCAGACTAAGCATGCCGACGCCCCAGGCGGGGAGAAC GGA [7069275] 7069404 37 81.1 37 ..........C.....T...GA....A.....A.C.. AGCTGGGGAGGTGAGGGGCGAGCGCGTCCAGGGGGTT 7069478 36 75.7 0 .....A.C......T.-.....A.....AG..T..G. | ========== ====== ====== ====== ===================================== ============================================================================================================= ================== 37 37 97.2 38 GTGGCGGTCGTCCTCCGGGGCGGCCGTGGATCGCAAC # Left flank : CGTCCAGGCCCGCATCCTCGCCCGCCACCTACGCAACGACCTACCCGGCTACCTGCCCTGGACCGCCACCTGATGGACCTGCTTCTCACCTACGACGTCGACACCACCACCTCCGAAGGACGTCGGCGCCTCCGCCGCGTCGCCAAACTCTGCGAAGGCCACGGCGTACGCGTTCAGAAGTCCGTGTTCGAAATCGTCTCCAACGACAAGGACCTGCTCCTGCTTCTCAACAGGTTGGACAACATCATCAACACGGACTGTGACAGCATCCGTATCTACCGACTGCCCCACGAGGGATTCGACGACGTCCAAACCCTCGGCATCGCCGAAGCACAGCCACACCGAGACGATCTCGTCCTGTGACACCGCCACTTCGGAACCCCAAGTACGCACACGACACGCGGATCACACCGAAGAGCAACGACGATTTTGTCCGTTTCTGGTGTCACCGCAAGCCGGTTCACCTGGGCCCACCACGGTATATCCGCTGCTCAGGCAGC # Right flank : CAGGAGGATCCAGCCGACTATACGGCAGTCGCGGGTGCGCGGGCTGCGAAGGTAACTGGTGCCAGCCGCGCGTCGTCCTGGCGGAGCGGACCTCGCTGAAAGGTCAGCTAGATGCAGGCTGATTTGCAGTCGCGTCGCACAGCCGGCGGAGCCGTCAGCGCCGCTCTCAGTGGGTCATGAACCTGCGGCTAGGCGCTTAGAAGGCGCTGAATCCATCTTCCCTCAACACCCTCTGACCTGCGTACTTTTAGATATCTGGCAGGGCGTCATGAGTTTTGTGGGACGTATGTGGGATGAGTGGCTGTCTCGAACCCATGGGATTTAGGCGACTCGTGGGGGTCCGTATCGGCAGGATCTCACGAGGTCTTCGCGGGTGGGACCTCTACGTGGAAATAGATCTGCCTCTCTTCGGTGTTGTCACCGGTCCAGTCGATGAGGGGGAGGTGTCGGGCCTGAAGCTGTTCCACGCAACGGATGGTGGCGTCGTCGAGGTTGTGTCG # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:-0.16, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGTCCTCCGGGGCGGCCGTGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGCGGTCGCCCTCCGGGGTGGCCGAGGATCGCAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-15.70,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-40] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 8371392-8373188 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007574.1 Streptomyces albulus strain NK660 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 8371392 28 100.0 33 ............................ CGGGCCGCGAAGGCGGAGCAGCAGATCAAGGAC 8371453 28 100.0 33 ............................ CCGAGAACCGGTGCCGGTACCGCTGCCGGGCGG 8371514 28 100.0 33 ............................ CGACTTCTCAGCTTCGCCGCGACCCGTACCCGG 8371575 28 100.0 33 ............................ CGGCGCGACCAGGAGCAGAGCCATCGGGGCGAA 8371636 28 100.0 33 ............................ CACCCACGGCCGGCGTACGGACGTCGTGCGCAT 8371697 28 100.0 33 ............................ CCAGGCATGCCTGTTCGTGTCGGTGCCGTCGAA 8371758 28 100.0 33 ............................ CAACGACGCGGCGCGCACGCAGCGGCTCACGGA 8371819 28 100.0 33 ............................ CTGGTAGCGGCGAGCGTTCATGTCAGCCCTTCC 8371880 28 100.0 33 ............................ CCGGACCGCGACCAGTACGGCCGATGGGTCCTT 8371941 28 100.0 33 ............................ TGGGTCCGGCCGTACCGGCAGCGGCTCGCCGCC 8372002 28 100.0 33 ............................ CGCGACCGCAGCGACCGCGATCAGGCCGACGAC 8372063 28 100.0 33 ............................ CTGTCGGTGCTCGCGCACGCACTGTTGGTGATC 8372124 28 100.0 33 ............................ AACGGTGCTGCCCGCTGTCGCCATGACGGCGGT 8372185 28 100.0 33 ............................ CTCGTCTTCGGCGCGGCCCTGTCCGCCCTCGTC 8372246 28 100.0 33 ............................ CACCCCTGCGTACACAGGAGGTCGATCCGCCAT 8372307 28 100.0 33 ............................ CGCGGTGACCGCCACCGCCAGCCACAGGAGACT 8372368 28 100.0 33 ............................ CAGCAAACGCATGGCTTCGGCATCCCGAAGTCT 8372429 28 100.0 33 ............................ CTGGGCCTCCTACGGCCCGGTGCCTGGTGTCGC 8372490 28 100.0 33 ............................ CGATGCGATCGGCGGGTACGACCGGGCCGCGTT 8372551 28 100.0 33 ............................ CGCCGCACCACTCGCGACGTGGCTACGAGTGCG 8372612 28 96.4 33 ........T................... CACCCCGGCCTTTCGGTCGGCGTATCGCCAAGC 8372673 28 100.0 33 ............................ CACGAAGCGGGTCAGGATCCAGGCGCCCCGGGC 8372734 28 100.0 33 ............................ CGCCCCTGTGGCGCACCCGCCGGACCATCGGCC 8372795 28 100.0 33 ............................ CACGAAGCGGGTCAGGATCCAGGCGCCCCGGGC 8372856 28 100.0 33 ............................ CGCGGTCAAGGCGTCGGCGACAGTAATCTGGGT 8372917 28 100.0 33 ............................ CCGGTCTGGACGGTCGTGGACGACCCCAACCGC 8372978 28 100.0 33 ............................ CGCGGGAATCGCAGTATGCACACTGATATACGC 8373039 28 100.0 33 ............................ CACTTTCCGGAGTGTGGAGGCCACGATCTCTGC 8373100 28 100.0 33 ............................ CGCCCCAGCGCCACCGCGGCCCCTGGACCATCG 8373161 28 96.4 0 ...........G................ | ========== ====== ====== ====== ============================ ================================= ================== 30 28 99.8 33 CCGCTCCCCGCACCCGCGGGGATGAGCC # Left flank : CGCCCTGTGGGACGAGGTTCGCCAGTACGCCGGCAACGGCCGCGCCTTGCTCGCCTACTCCACCAACTCCGAACAGGGATACGCCTTCCGTACCCACGACCACAAATGGCATCCCGTCGACCACGAGGGCCTCACCCTCATCTTCCGCCCTTCCAGCCAGCCGTCTCGCCCATCACCTTCCTCAGGCTGGAGCAAGGCGTCCAAACGCCGACGTTTCGGAAACCGGGCGCCGTAGCTCCGCCGTCAACGGGTCGGCCCTCCGAGCATGTCTGCACGGGGTGCCCGTACCGACTGCCCGGCACTGTAGGACGGGGGGCCGGGCCTCGTCGGGGTGTCTTTGGGGCTTTGACGGTTTCACCCGAGGGGCCTGGGCGTGAGGGCATAGCCTGTGGCGTGGAGGTATCTCTGACCGAACAGGTTCCTGTTTATCCCGTATGCCCTTTTCTCTCATCCTTGCTGAAACAAGCGTCGTCCCTTGATGAAAGTACAGCTCACGAAGC # Right flank : CCGCTCCAATGCCCACTACCGCGAGCACCCGCTGACCTGGGACGAACTCGCCCTGACCGCGACCTGCCGCGGTGAGGCGATGAGCCGTCAGGCCAAGCACGACCACGACGCCTTCAAGGAGGTTTGGCTGCTGTTCGAGAACGAGCAGGGCCGCTTCCCTCTCTACCCGGGCGAGTCGGTGTGGATCGAGTACGCCTACTCGGCGGGCGAAGAGAAGTGGGGCCGCTGGTTCGAGCGCGCCGTCCGTCTGCCCACGGAGCACCTGGCGGTCGAACTCGCCTTCCCTGCTGAGCTTGACCCCGCTGTGTGGGGCACCGAGACCTCCATGACCGCCGAGGCGGCGCCGCTGCGAACCGCACCGGTCCAGTGCGAGGAGAACGGGGTGCGGGTCTTCTCCTGGAGCACGTCCACACCCGCACTCCACGCCCGGTACCGTCTGGAATGGCGGTTCCGGGCCCGACCCGAACATGACGCAAACCCAGGGGAGTTCAGGTGATTCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGCTCCCCGCACCCGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCTCGCGGGGATGAGCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 8374291-8374745 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007574.1 Streptomyces albulus strain NK660 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 8374291 28 92.9 33 ...........G..T............. CACCGGCCGGGCACCTGCATTTTTGCAGGTCAG 8374352 28 100.0 33 ............................ CCTCGAAGAACACCGCGCCACCCGGACCACTGT 8374413 28 100.0 33 ............................ CAACCCTCGGCCCCGGGCCCTGGTCGAGACCGA 8374474 28 85.7 33 .T.........G..T...A......... CAACTTGCTCGCCACGAGCACGACTTCGAGGAC 8374535 28 85.7 33 ..A.....T.AG................ CGCGATGAGCGCCTACCGGGCCAAGCGCGGGAA 8374596 28 96.4 33 .T.......................... CACCTGATCATGAAACGCGCTCGTGCCCTGATC 8374657 28 96.4 33 ...............C............ CGCTCAGCTCCCCCTCCCATCACGGGCGCTCGA 8374718 28 92.9 0 ...........G..T............. | ========== ====== ====== ====== ============================ ================================= ================== 8 28 93.7 33 CCGCTCCCCGCACCCGCGGGGATGAGCC # Left flank : GCAGCCGAGCAGGTCATCGAGCAGCTGTTCTCCTCGATGGAGCGGATCGGGCGGGTCCACCCCTTCGCGAAGGGCATGGGCATCGCGGCCCCGCAGATCGGGGTCGGCCGGGCCGCTGCCGTGGTCCAGTCCCCCGACCCCGGCACCCCGGCGATCGTCCTGATCAACCCCCGTATCACCGGCCGCTCCAGCGAGGTGGACGAGCAGTACGAGGGCTGCCTCAGCTTCTTCGACGTCCGCGGCCTGGTCCCCCGGCCTCTTCGGATCACCGTGGAGACCACGACGCTGGAGGGCCCTGTGGTGACGACTACTTACGAACGCGGACTCGCCCGGCTGGTCCACCACGAGATCGACCACCTGGACGGCCTGCTCTACACGGCGCGGATGCGGACGGGAGCCGCCCCTATCCCTGTCGAGCAGTACCGCCAGACGGGCCGAACGTGGGCCTATGGGCAGTAGCGGCCGACACGGCGGCTGGGCCTCACGCACCAAGAGCTGCG # Right flank : CCAGCCTGCGACGAGCGTCGCGGAGGACGAAGTGACGCTCACCGGTGGGAACCGCCACGACGTCACCCAGTTGCTGCCGCTGCGGGAAGCGGTCCCGCCGATCCGGGGCCTGCGCGGACGGCCCCGCCGCAAGCCCCGACGCCTGTACGCCGACCGGGGCTACGACTTCGACGAGTACCGCCGCCTGCTGTGGAAGCGCGGCATCAAGCCGCTGATCGCCCGACGCGACGTCGCACGCAGTTCCGGACTGGGCAAGGCGTGCTGGATCGTTGAGCGCGCATTCGCCTGGCTGCACCAGTTCAAACGCCTCCGTACCGGCCACGAGCGGCGTGCCGAAGTCCACCGCGGCCTCCTCGAACTCGCCTGTGGCATCATCTGCCTGCGACGCCTCCGAACGGCATCTTGAAACGCTCATTGAGCCTGTGTCAGTGGGGCCGCATAGGGTCCGGCCCATGGCTGACACTGAACTGACGACGCTGCTCGGCGTCCTGAACAGCAAG # Questionable array : NO Score: 5.42 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGCTCCCCGCACCCGCGGGGATGAGCC # Alternate repeat : CCGCTCCCCGCGCCTGCGGGGATGAGCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCTCGCGGGGATGAGCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 8375748-8376320 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007574.1 Streptomyces albulus strain NK660 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 8375748 28 92.9 33 ...........A.A.............. CGACGTGCCGCTCAAGGGACCGTTTGACGTCCA 8375809 28 96.4 30 ...........A................ CCCGCGGCCACAAGGCACTTGCCCATGGCC 8375867 28 100.0 33 ............................ CGCGACAAGGCGGGCCTTGTTGGTGATCTCGAC 8375928 28 100.0 33 ............................ CTGGACCGCCGGCACCGGATCCAACAACTACGT 8375989 28 96.4 33 ..............T............. CGTCCCGGACACCGTGTACGCCTGCACTACCGG 8376050 28 92.9 33 ...........A.........T...... CACGGGCCGGTTTTCCAACGCTCTCCGCTACCT 8376111 28 92.9 33 .........A.A................ CACCGCAAGGCGGGTGAGCGTGTGCATGTCGAG 8376172 28 96.4 32 ..............T............. CAGCACCCCAGCCGCCCCGGCCTCTGACCTGC 8376232 28 92.9 33 ................T.........T. CTGGGCGTTCCGCACGGGCCATCGGTGCCCACC T [8376234] 8376294 27 85.7 0 ..............T..A....G..-.. | ========== ====== ====== ====== ============================ ================================= ================== 10 28 94.7 33 CCGCTCCCCGCGCCCGCGGGGATGAGCC # Left flank : AAGCACGTCCTGGGCATCCTGGAGGGCCTAAACGAGGAGGCGCTGAGGCGCCCGGTTCTACCGTCCGGCTGGACATGCCTTGGACTGGTGCACCATCTCGCTCTGGACGACGAGAAGTTCTGGTTCCGCGCGGTCGCTGCGGGGGAGCAAGCAGCGATCGACGAGATCCTCGGGTCCGGGGAGAATGCGTGGCAGCCCGCCCCGGAGAAAACAGCCGAGGAGGTCTTCGCTCTCTACCGCAAGGAAGGGGAGCTCGCCGACACCTTCCTTGCCGGCGCCGACCTGAAGGCGGCCCCGAGATGGTGGCCGGACTTCTTCGGTAGCTGGCGCCTCGACAACCTGCGCGAGGTCATCCTGCACGTGATCACCGAGACCGCTACCCACGCTGGCCACTTGGACGCTGTGCGCGAACTCATCGACGGCAGGCAGAGGTTGGTTCTCGCTTGACGGGAGAGCCACTCCGCTGTGGCGACCAAGATCGTCGAACGCGAGGTCCTGGA # Right flank : CTGGCTGTACTCGGCCCACAGGACCCCGGCTGGGGAACACCCCCACGTACGTGGGGAGGGCCTTCCTGACCTGCGGTGTTGTGGCTGGGGTGCTGTTGTTTTGTCAATAAGCGGGTGGTGCGCTGTCGACGATACCGAGTGTGGGGAGCCGGTCGGCGGAAGATCGGCCGGCCTGGTGGTCGGCCGGCGGTGGCGCGGTTTGTCAGTCTGGCCTGTTCGCGAGGCAGGTCTTCCAGGACCAACTCCTTGCCGAGGTCGGTGCGTTCCTGCTCTGAGGCCGGGGGACAGCGGTCGGACCGGGCGCGGGCGGCATCACCCGAGCCACCGGCACGGCCGGGACGTCGTTCTCGTGTCGCGCGGCCGCGACTGCAGCGCGAGCCGCGGCGGCAGTTTGCCAGGCGTGGACATGCTCCCCTTGCGGGCATGGTGTCGGCGGCCGGGGGTTCACGGGGTGAGATCGAGGACTCGGACGGGATGCCCGTGCCAGCGCTGCGGGTCGG # Questionable array : NO Score: 5.36 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.36, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGCTCCCCGCGCCCGCGGGGATGAGCC # Alternate repeat : CCGCTCCCCGCGCCTGCGGGGATGAGCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [2,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCTCGCGGGGATGAGCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //