Array 1 3855275-3854286 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP057330.1 Klebsiella oxytoca strain RHB30-C02 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3855274 28 100.0 32 ............................ TTATCCACGGCTTCCAGCAACTCGGGGTTTTC 3855214 28 100.0 32 ............................ AAATGGGCCGCCAACGAAAGCAAGAGCACCTC 3855154 28 100.0 32 ............................ AATACTGGAAGGATATTAAGCGTGGCGGTATT 3855094 28 100.0 32 ............................ ATATCCGCCGCGCCGGATAAGCCTTGCTGCCC 3855034 28 100.0 32 ............................ ATCGTGTCTGGGAGAATGTCTTTGCTCATAAT 3854974 28 100.0 32 ............................ TGAAATTGATAGAAGGTTCTGAGCAAACCTGC 3854914 28 100.0 32 ............................ ACGATGTGAACGCTATCGCTATGCACACCACT 3854854 28 100.0 32 ............................ TCGGTGCGCAGTCCAGATATTGCGATATACAC 3854794 28 100.0 32 ............................ ATTAAAACCAATAGTCTGACGATCCAGCGCCA 3854734 28 96.4 32 ..........C................. AGATAGCACCGCCTGGGCGCATATCTTTCGCC 3854674 28 100.0 32 ............................ CGATGCCTCCGATAAGAGAAAAGGCGTTCTCT 3854614 28 100.0 32 ............................ CTGGAAACATAGCAAATGGCACCGTGTTACAA 3854554 28 100.0 32 ............................ TCAAAAAGTACGGACGGTGGACGGTGAGCGAA 3854494 28 100.0 32 ............................ ATTCGCGTTAACTACGAAGACAGTAACGGTAA 3854434 28 100.0 32 ............................ AGATAGCCACCGCCGAGTAAGACGATTGCCCC 3854374 28 100.0 33 ............................ CTGACCGGTATCAATTACGCGCAAATCCATTTG 3854313 28 92.9 0 .........................TG. | ========== ====== ====== ====== ============================ ================================= ================== 17 28 99.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TAAAAGGATGGCGTTGCGTCAGTCGGGTACAGGTAAAAAGCAGCCCCGAGCGGCTGATGCGCCGCTCGGTGAGAAAAGGCTGGCTGACACAGGATGAAGCAAATGAGCGATTGCTTAGCATGCGGGGAGAGTCGACAGCGCTCCCCTGGTTGAATATGAAAAGCCTCTCAAATGGGCAGAAGTTTCCGCTATTTATTTGTCACGGTGAGCTGCTGGCGCAGCGCGTCGCGGGAACATTCAATAGCTATGGGCTGAGCCATATCGCGACTATCCCCTGGTTTTAGCATGTTGGTGAGAGTTTTTGACGAGTGCTAAAACAAACCATAACCGGCGCGGTCTTTCGCGCCGATTTTTCAATCGCTAATTAAAACCCTTTTTTATGATGAATCTCTATCTTATTGATTTTATATAGTGATTTTATAAAAGTCGGAAAAAGGGTTGTGAAGAGGGGAAGGCGTTTTTTGGCTTTTTTATCAGATGGTTATAGTGGTTAGGCTTCA # Right flank : TCGTGGCGGTTACGGGCGCAGAGACAGGGCCGTCAAAGCCGAAGAGGGAAGCGGCGTGAGAATAAAAGAAATGAAAAGACCGGGAATTATCCCGGCCTTCAGCATCTGGCGCGTTAAGCGCGAAAACGATCAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGCTCAACAGTCACTTTGTCGCCCGTCAGAATGCGGATGTAGTTTTTACGCATTTTACCGGAAATATGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGGAACATAGTGTTAGGCAGCGTATCAAGTACGGTGCCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAGTCCTCTGGGGTATCACTACCGTAGTTTTGAACCGGCAAGATAATGCCGAAGTTCAGCAAGTATGTAAAGTTTTACGTCAAATCGCCGAAGTAGTTTTGGCGCATTGCCCGTAATTCACGCGGATAAACCGGGCGACAGGCGCAAACGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 3865053-3863703 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP057330.1 Klebsiella oxytoca strain RHB30-C02 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3865052 28 100.0 32 ............................ AAAAACTGAGCGGCCGCAGAATGAAGTTGTAA 3864992 28 100.0 32 ............................ TCATTTGGCGACGTGCCTTGTGCGCGCATTTC 3864932 28 100.0 32 ............................ GTCAAAAGAATGATTTCCTGCACAGGGTTCAA 3864872 28 100.0 32 ............................ AGGAGCGGGTCATATTCCACCGTCGCGGCTTT 3864812 28 100.0 32 ............................ GGAAGACTGGCCTAATTATGAGGTGCGTTATC 3864752 28 100.0 32 ............................ TGCAGCAGCGGGTAACGTTCCTGACGACGACC 3864692 28 100.0 32 ............................ CAATACTCACCATTGATGAGCAACGATAAAAA 3864632 28 100.0 32 ............................ GTAACCGCATGTCGGCTTTTGCTGCATGGTGG 3864572 28 100.0 32 ............................ TTCGGCCATACCGCGATACGACGCTTAACCAG 3864512 28 100.0 33 ............................ TCGACGCGCTGGCCTCGCTGCTGATTTCTACGA 3864451 28 100.0 32 ............................ TACCGGACAACGATCACCCATTGTCATGTAAC 3864391 28 100.0 32 ............................ TGTAATGGCATCGGGAGGCTGTCATGTGGATA 3864331 28 100.0 32 ............................ GGCTGCGTCGGGACCCACCACATCGCCAGCAG 3864271 28 96.4 32 ........T................... CCTGGCCCCGGCAGTATCTATGATGGTCAGGG 3864211 28 100.0 32 ............................ GGAAGAAATCACCGCCATGCTTACCGCAGGAG 3864151 28 100.0 32 ............................ TGCCGTGGCGGGGTTGGCTCCAGCCACAATCC 3864091 28 100.0 33 ............................ TGCGGCTGCACGACCAGCGTCAGGGAAATCACT 3864030 28 100.0 32 ............................ CTCTTCGCGTCTGCGATACCGGAAACGGAGAC 3863970 28 100.0 32 ............................ ATGCACCGGTAGAAGAACGCTGATCAATTGCC 3863910 28 100.0 32 ............................ GTAAAGACGCTACCAGGCACATCGCTGAATAA 3863850 28 96.4 32 ............G............... TCGACATCGCCGAGAGCGGCGTAGCCGTATAG 3863790 28 92.9 32 ............G.......A....... TGCCCGCCGAGCCGGAAAGCGACAGCGGTAAA 3863730 28 92.9 0 ....T.C..................... | ========== ====== ====== ====== ============================ ================================= ================== 23 28 99.1 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GTTATCCATCAGGTGGTGGATAAGTTTATCGTTGAGCTGCAGGTCCAGCTGGATCAGAAAGGCGTCTCTTTGGAAGTAAGCCAGGAAGCCCGCGATTGGCTGGCCGAGAAAGGTTACGACCGGGCCATGGGCGCGCGTCCGATGGCGAGGGTGATTCAGGACAACCTGAAAAAACCGCTGGCCAACGAGCTGCTGTTTGGCTCACTGGTTGACGGCGGTCAGGTGATCGTTGAGCTGGATAAAGAGAAAAATGCGCTGACCTATGCCTTCCAGAGTGCGCAAAAGCACAAACCGGAAGCGGCACATTAAGTCGCTTGCGTGAAACGTCAAAACCGGCCTCAGGGCCGGTTTTTTTATGCCGATGTCCTGGACCCTTTTTTATTCCCCTTTTTTAAGCTATTGATTTTATTAAAGAGAAAATCTGGCGTGAAATTATGGTAGCAGAGAGGGGCTGTTGATTAATTTCAATGATAACAATATGGTAGGGTGTCGTTCGTTCA # Right flank : AGAGCTTGCCCATACTGCGGTGCAGGCTAAAACGATTCTAAAGAATTTGCCAAAATAATAGGCTATTTTGCAATTTGCGATGAATGTCAACGTATTACCTCTAATATACTGTTTTTATAAACAGCTATCGACACCGAGCCACAGGATGTGACTATGCCCGCGAACTATATTGCCCCGTCGGATTTAAAAATGATTCTCCATTCGAAGCGCGCCAATATTTATTATCTGAAAAAGTGTCGGGTTCAGGTCAACGGCGGCCGCGTGGAATATGTTACGAGCGAGGGGAACGAGTCATTCTACTGGAATATCCCAATAGCAAATACAACGGCTATTATGTTGGGAATGGGAACCTCAGTTAGCCAGGCTGCAATGCGTGAGTTCGCCCGAGCGGGCGTAATGGTCGGTTTTTGCGGTACGGATGGCACGCCTCTTTATGCCGCTAATGAAGTCGATATTGACGTTTCCTGGCTGTCCCCGCAAAGCGAATATCGACCAACTGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //