Array 1 24183-28116 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNUK010000015.1 Lactobacillus delbrueckii subsp. lactis strain CIP 110109 CIP110109-i1-1_scf15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 24183 28 100.0 33 ............................ TGTGGAAGGCGGGCCGCGTTACTTAGTAGCGCC 24244 28 100.0 33 ............................ GTTAATGAAATGATGCAAGAGCAGACCGCTCAA 24305 28 100.0 33 ............................ TCGAGGCCAGATAACGTTGGAACTTCTTGCGTA 24366 28 100.0 33 ............................ CGGCTTCCCGACTACAAGCCGCGAACTAACGGA 24427 28 100.0 33 ............................ TTCGGGCCGCGTTTTTAGCCCGCTGCTCTGGTG 24488 28 100.0 33 ............................ TGATATCCTTTTAGCCGTTGACCAAAAGGTTCA 24549 28 100.0 33 ............................ CTACCCTCTCATCGCAACGGCAAGAATCAATTG 24610 28 100.0 33 ............................ TATTCGACCAATTGACGCCAAAGCGGCGCTACT 24671 28 100.0 33 ............................ TCCTCCGGCTGGATCCGCACTTATCTGGTGTGT 24732 28 100.0 33 ............................ TAGCAAGAAAGTTTAGAGAGAACTCCTTGGTCA 24793 28 100.0 33 ............................ CCAGACCGAAAAAATCGAAAATAAAGAAGCATA 24854 28 100.0 33 ............................ TCTTGGCGTTAGCCGTACTCAAACTACCACTAA 24915 28 100.0 33 ............................ TCCCGATTCGTGAGATCCCATTTAGGTTCTGGT 24976 28 100.0 34 ............................ TCACCCCCCGGGCTTTTTTGAGCTCAGAAAAAAA 25038 28 100.0 33 ............................ TTTGAAGGCTGCCAAACCTACACCGTTGTTAAG 25099 28 100.0 33 ............................ TAAAAAATGCTCTTTAGGGTTGCGTTACCGTCG 25160 28 100.0 33 ............................ CGGCCGATGCAATCCGGGCAGACTTGACCAATA 25221 28 100.0 33 ............................ TTTTTATACTGAAGTAAACGACTTTAACCGGGC 25282 28 100.0 33 ............................ CCTACATCGATGCGGGCAGAATTGAAACAAATG 25343 28 100.0 33 ............................ CACCATCGTCAATGTGTGTCTGACCATTAAGGT 25404 28 100.0 33 ............................ TATCAGCGCACGTGGACTGGTGACCACTGGACG 25465 28 100.0 33 ............................ AAGCCAAGGTCGCCGAAGACAAGGCTGCATCTA 25526 28 100.0 33 ............................ CCAAGTACGTCCCCGCTGTGGTAAGGCTGTTCA 25587 28 96.4 33 .......T.................... TCAAAAAAAGGAGGTGAAAGTCTTATGACCACA 25648 28 100.0 33 ............................ TGTCACGCACGCGCTTGATGTAGCAGTCGACCA 25709 28 100.0 33 ............................ TTAAAAATAAAATTTGGAACGAGTGGAACATGA 25770 28 100.0 33 ............................ TCAAAAACTCGGAAGAAGCCATGTCTCCAACAA 25831 28 100.0 33 ............................ TTCGCAAACAGTCGTGAGCGCCTATGACCTGCT 25892 28 100.0 33 ............................ GCTCCATTCCACACATCGGATAACGTTCTCGTA 25953 28 100.0 33 ............................ TGGGGCTTGAAGGCAACTTCTTAGTAGATTCTG 26014 28 100.0 33 ............................ AACAGCCTGTTTGCCAACCAGTGGCAACCGCAG 26075 28 100.0 33 ............................ CAAGCAATCAATGATAAGGCTAATGCGCAGGTG 26136 28 100.0 33 ............................ TAGTTTAACGAACATAAAATCAAACATTGATTA 26197 28 100.0 33 ............................ CCACTGAACCATTCAAGTTGAGCCCAGAACAAA 26258 28 100.0 33 ............................ CACGAAGTCAGGCATCGGGTTGCCCTTGCTGGT 26319 28 100.0 33 ............................ CTATGACGCGATCGAGAAGGCCTTTGATGGCTA 26380 28 100.0 33 ............................ TCAAGCTCTTTGCTCTTTGGGCTACCCTTGCCC 26441 28 100.0 33 ............................ CTTGCTGGCTACTTCCGCTTGACGGGAGTAGCT 26502 28 100.0 33 ............................ CAGACTGGGCAACTTAGTGGTAGCTTGTCTACA 26563 28 100.0 33 ............................ TCAACAAACATTTGGTCATTACTGATCCATTAG 26624 28 100.0 33 ............................ TCTCTGCGAAGCCTCCAGAAAGTTGTTCTGGAA 26685 28 100.0 33 ............................ CGAAAATGGCAGGAATTAACAATGTTGTACTGG 26746 28 100.0 33 ............................ TCTTCTGGAGCTTCTCACACACGAATTTCGTGT 26807 28 100.0 33 ............................ TGCATCCCAAGCTGGGGAGCGTGGTTCGCACGG 26868 28 100.0 33 ............................ TTAAGATCGTTTATCCGAACGGCAAGACCTTGA 26929 28 100.0 33 ............................ CTCAGAGGGTACCAGCAAGAGCTGATTGACCGG 26990 28 100.0 33 ............................ TCGACCTCTGGGAAGCGGTCAAAAATAACCGTT 27051 28 100.0 33 ............................ TGATCCGGTCTTGGATGACCTCAAGGTCCTCTG 27112 28 100.0 33 ............................ TTATTCCGGTTACTCCAGACGGCGGGAAGATTG 27173 28 100.0 33 ............................ TCTTCCGAAAAAGTTTGGTGACGTTGACATAGA 27234 28 100.0 33 ............................ TCCAGTGAGCCGGAAAGTTTACAGAGCGATATT 27295 28 100.0 33 ............................ TTACGCCTGGCGAATACCAGCAAGGCGGCCTGA 27356 28 100.0 33 ............................ TTGAATTAGCCGTCAAGCCTTTAACAGTGATAT 27417 28 100.0 33 ............................ TATCTGTTGACCATTGCGGAATTGCAGACAGAG 27478 28 100.0 33 ............................ TAACGCGCTTGGAGCTGTTTGACTTGTCGAAGT 27539 28 100.0 34 ............................ CATCGCCCTTCTTGGGATTCTTGGGTTCTCCTTG 27601 28 100.0 33 ............................ GGGCCATTGGGCCGGTAAATTTCTTTTCTTTGT 27662 28 100.0 33 ............................ TTAGGTAACCAATAAAGGTCGAAACCCCAACAA 27723 28 100.0 33 ............................ TAGTGAAGACGTAGAGGAGATTATCAACGTTTT 27784 28 100.0 33 ............................ CTTGCTTGTGTCCGTGGCGGCCTTTTTAGCTAT 27845 28 100.0 33 ............................ TTAGGCTAACTGCTATTAGCGTTTTATCGTACG 27906 28 100.0 33 ............................ CGAAACCCGAAAAAAGAATTAAACGGAGGTAAA 27967 28 100.0 33 ............................ TGGCTGTGATCATTCCGTTAATAAGGTCAATTA 28028 28 100.0 33 ............................ TAGCTCGTCTTGAACAGCATTTAGTAAATCGCG 28089 28 85.7 0 ............T.T.......CA.... | ========== ====== ====== ====== ============================ ================================== ================== 65 28 99.7 33 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGATTGAATACGGAAAGTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTACCAAAACAGATAGTGGAGCTGACCGGGATAACTCCAGCAATGCTTGATAAGGAAGGCGTCCCACTGCAAGATGTTTTGGGAGAACTAACTGACTTTGTTGGGGATGTGCCAATCGTTGGGTATAATTTTAGATTCGATTCTGCATTTTTGAATAGGGAATATCGGAAATGCGGGATGCAAGAATTAAAAAATGAGATCAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAACAAGGTGCCGCATAATGCTGTGTCTGACGCAAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTTTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : CGTTCTTTATGTTATTGTGCTTTTCGTACTGTGTATTTTCCATACATATGCCGCGATGATCATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGGTAGAGTAGAGAGGTAATAGAGAAGGAGTGAGGAACAAACATGAGCATTTACGGTAAGTACGCCGATTATCTTCCACAGATCCTGGATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGCAAAACACGGGCAAAGGCTATACGAGTACCTGAAAGGTCGCGTCAAAGGCGAAGAAAGCATGACGCAAAAGTGCGAAAGAAAAGGTTTACCGCTGACGCCAGAGTCTGCATTGATTGAAAACCGGGATGCGATTGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATCATTAATGAAAAAGACTACATTACCGATGCTAAGCCAAACGGCTACCGGTCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.30,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //