Array 1 27958-28346 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABHIY010000051.1 Enterobacter roggenkampii strain 4928STDY7387925, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 27958 28 100.0 32 ............................ TGACGCAATGAATTAATTGTCAAAGCGTCAGC 28018 28 100.0 32 ............................ ATTTATTCATCCTCGATAGGCATATTGCAAAT 28078 28 100.0 32 ............................ GAAGAACCCCTACCCGAAATGTGACTATAAGA 28138 28 100.0 33 ............................ AGAGGAGCTGGATAATCGACATTACCGCTTCAC 28199 28 100.0 32 ............................ TTTCGTCCCGCGCCCCTCATACCGGCTATTTC 28259 28 100.0 32 ............................ TTAAGAGGCGTATTGGCCACCCGGTCGCAGAG 28319 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 7 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ATGGGTTGCATAAGCTGTTTGGTGGGGTGGGCTTTATCAGCGGTATGCTGGTGGAGAAAGGGCTGCCGGGGTTTATTGCCTACGGCGTGTTGATTGGCGAAGTGGTGGCGCCGATCCTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATCGTGGCGTGGCTGATGGTGGGATTGGATGAGACATTCGCGCTCGACAAGGTCGGGGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATCGGCTCGCTGGCGGTGGCGTTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAACACCTGCGTGGCGGTAGGGGTTGGAATCTGTTCCGAGGGAAGGGGTCTACGGACCCTTTTTTATTGGTGAGTTTTAAGTTGTTGATTTCACAACGGTGAATTGTTGGTGGGGAAAAAAGGGTTTACGGAGAATTTTAGGGGGATTTCTTTATATCACAAGAAGATAGGTGTAGATTGTTCCA # Right flank : AGCACTTCAGCCGGGTAAGCGTCGGTGGTTAGGGTCCAATGCCGAACAGGCAGTAGGCACAACGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACGAACGAACGTTTATTGTTTATGCGAGGACCAGATCGCCCTGCGGATGGCACGAGCACGCCAGCACGTAACCCTCGGCAATCTCCGCGTCGGACAGCGTCATGGTGCTGGTGACGGTGTACTCCCCGGAAACTACCTTTGTTTTACAGCAGCCGCACACCCCGGCACGGCAGGCCGCCGCCACCGGTACGTTGTTGCTTTCCAGCGCCTCCAGCAGCGTAGTACCCACACGGCCAAAGAAGGTCTGCGCAGGCTGCAGTTTGGTGAACTGAATCCCGCTGGTTGCCGCTTCCGCCACCGGCGTGAAGAACTGCTCTTTGAAGAAGCGGGTCACGCCGAGCGCTTTCACCTCTTTCTCGACGATATCCATGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 10747-11134 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABHIY010000008.1 Enterobacter roggenkampii strain 4928STDY7387925, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 10747 28 100.0 32 ............................ ATTACAAAAGGCTCTGAATGGGGTTTGTAGTT 10807 28 100.0 32 ............................ ATCAAGAATTGAGGCTCGTCTTGCACAGCGAT 10867 28 100.0 32 ............................ CTGTAAAGCAACAGTAGAGTCAACCTGCTTAG 10927 28 100.0 32 ............................ ATATTCTTTCGCACGCTGAAAGAGGACCCAAC 10987 28 100.0 32 ............................ TGCAGCGGCGCTGAGCGTCACGCCGGGCTGGT 11047 28 100.0 32 ............................ CGTGGCCGTGCGGTCACGGCGAAGCATCTGAA 11107 28 82.1 0 .....................AC.ACT. | ========== ====== ====== ====== ============================ ================================ ================== 7 28 97.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCCCACAAACGCAGCCCGTATGTCGTTGCCTAGGGGCTTATCTGGAAGAGGTAAAATCCGGACTCACAGAATCTATGCGTGATTTTCAGGTGGTGGAATTTGAGGACGAAGCGGAAAAACCGCGACAAAAAGAGTGGTTGCTGGAAGATACAGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTGCTGGTGTCGCATTTTGACCGAGATATGTTGCCGCACCTGACGGGGTTGCTGCATGACATTACGCATTCAATGGCCGCGGATGTCGTTGCACCTCAAAGTGCAGAAACGGTAATTCATATTATTTCCTGAGTGCTATCTGAGGCGTCGGGGGTGTTCCTCTGACGCCATTGGTTTAAACCCTTTTTTCTGATGCTTACGTAACATATTGATTTATATGGTTATAATTTACGTCCCAGAAAAAGGGTTTTATGCGAAAAAGTTGATTATTTTGTTTGCTAACAATAGGATGGCGTTGTTTCCTTTCA # Right flank : AAAAACAACTCTCTAAAACATTCAGCTTACCTATTTAAAACTTAATACGATCAAACCCACTGAATCGCCACGGGTTTAACAGACACCTCAGAGTCATTTAAGATGACTTAAAGAGAGGTGCCCATGAGCGGTAAGCGTTATCCTGAAGAGTTTAAAATTGAAGCAGTCAAACAGGTTGTTGATCGTGGTCATTCTGTTTCCAGTGTTGCAACACGTCTCGATATCACCACTCACAGTCTTTACGCCTGGATAAAGAAGTACGGCCCGGATTCTTCCATAGTTCAAAAACAGAGGCTTTTTCCTCTGCTGTAAATGTTCGTCTCATTCAAAAAACCTCCGCAACCCCATGTTTTCACATAACTGTTGCGTTGACCAATTGAATCTACAGCGGCGTACTTCGCAAAGCTGTCCGACTGAGGTACGCCTTTAAGGCCGCTGACGAAAAAGCCATGCTGAAAGCGCTGAAGATGGACAGGGCAGAGTGGAGCAATAGCCCGCTC # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 19606-20655 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABHIY010000008.1 Enterobacter roggenkampii strain 4928STDY7387925, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 19606 28 100.0 32 ............................ AAACACATCCAAATCAACGGGGTCACCGTTAC 19666 28 100.0 32 ............................ AGCAGCACGAACATCACTGCGTCGAATGGGTT 19726 28 100.0 32 ............................ GGTAACCATCAGCCCATGCATGGCCTGCGCCG 19786 28 100.0 32 ............................ GTCTGCAGCTGTCACTGCAGCTGCGTTCGTCC 19846 28 100.0 32 ............................ TGCCAGCCAGCGTACCCATCAATGACGGCCGC 19906 28 100.0 32 ............................ GATGGTCGGCCAGGCTAAGTTAAAACGATATA 19966 28 100.0 32 ............................ AGGAAAACACGTTCCTCATTGATGATTCAGAG 20026 28 100.0 33 ............................ AGTGGTTTCCCACCTTGGGTGAAATGATGCTGT 20087 28 100.0 32 ............................ AGATTCTCCAGATGCGGCTGCGGGTGCGTGCG 20147 28 100.0 33 ............................ ATAAAACCGGGGCGGCGACCGCAGGTGCCGGGT 20208 28 100.0 32 ............................ AGGCCGCGCTGACCAGCATAATCGCTAAGTGG 20268 28 96.4 32 ...........C................ AGCCCGGCAGAACCTAACCAACCCGCACCAGC 20328 28 100.0 32 ............................ AAGTGATAATGGGGTCGGGCTAATTTCGAGCC 20388 28 100.0 32 ............................ TAAAGAAAAACAGCGCCAGGCAGCGTGACCAG 20448 28 100.0 32 ............................ ACCATGAGCTTTTCGAGATACCGCCCGACCTG 20508 28 96.4 32 ....A....................... GCTGGAATCAAAGTGATGGAGTGAGTATAAGG 20568 28 82.1 31 A...A......C...C......C..... ATAGAAAATAAGGCCTCACAGTCCTTGCACC C [20592] 20628 28 67.9 0 ..A.A...T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 18 28 96.8 32 GTGCTCTGCCGTACAGGCAGCTTAGAAA # Left flank : AACGGGCCACGCGTTCGCTCTCGTCGGGCGTTAACGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTGATACCCGTGACACGCAAAATGTCCGCTTTCGACATGGACGTCCACTCGTGGATGTTGTCGAGCACACTGACGGGTAATCCCTGATTGAGAAATTCAATCAACCGCATACCTCGGTTGGCGGGTAAACCGGCGTAACGCCAAAGTGCGTTATCAGCAGGTTTCTGTGCGGGGATCCATGTTCTCATGTCACCTCCTGAGTGATGTTATTTGTCATGGTTAAGTATAGCCATTTGTCAGGGTGGGGGGAATGGGTGTTTTTGTGTGGGGGATTAATGCGAAGAAAGGTGTTTTGACCCTAATTTTTAGCGTTTGTGTAATAGATTGATTTTAAATGATTATTTCTGGTGGATGAAAAAGAGGGTGAGAGAAGGATTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCA # Right flank : GCTGGAACGAACGGCTAAATAATTGTTCAAATAATCGACTGCGACACACAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGTAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTGAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGATACAAC # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //