Array 1 1946114-1943941 **** Predicted by CRISPRDetect 2.4 *** >NZ_UYIQ01000001.1 Capnocytophaga ochracea strain NCTC11458, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 1946113 46 93.5 30 .....A........C.................C............. AACATCTACACAGCTATTGCTACCGCTTGG 1946037 46 97.8 30 ................................C............. AGAGGGGCAAAATTCAGTGAACAAGAATTT 1945961 46 100.0 30 .............................................. ATAATACCAGTTATATTGTCAAGAAAACAG 1945885 46 100.0 30 .............................................. ATAATACCAGTTATATTGTCAAGAAAACAG 1945809 46 100.0 31 .............................................. CATAACTTTCATAATGTTTAGCACGAATGTG 1945732 46 100.0 30 .............................................. GAAAACTGATTGGTTATTTCTGTGGTAACC 1945656 46 100.0 29 .............................................. CAAATGCAAGAATTAATGATTAAAAACCA 1945581 46 100.0 30 .............................................. ATAACTTCTACAATTTCGTCGCTGTTTGCA 1945505 46 95.7 30 .........................GA................... AAGCTATTGTGGGTATTAGACACCAAGCCT 1945429 46 100.0 30 .............................................. CAGCAAGACCAGAATACAGGGAAGGAGTAT 1945353 46 100.0 30 .............................................. AGTGCTATCATTTTTGTTCCTGCTCCTACT 1945277 46 100.0 30 .............................................. TAGCTTCTACTTTAAGACGTTGCCAATTAG 1945201 46 100.0 30 .............................................. TGTGAGCACGTTCTCTTAAATCCTTATCTG 1945125 46 100.0 30 .............................................. GAAAGGGGAGGTAACTCCTCCCCTCTTTTA 1945049 46 100.0 30 .............................................. ATCATCAAAGTACATACGTATATCATTTCT 1944973 46 100.0 30 .............................................. ATTGCTTTAATATTGTCGATTATAGCAGTT 1944897 46 100.0 30 .............................................. ATTGTCCGACAAGCAGGCAGGAGTTCTTTT 1944821 46 100.0 30 .............................................. CGAAGAAGTAGATATTAAAGCATTGGAGGC 1944745 46 100.0 30 .............................................. TCGACGTTGTTAGTAAGGGCAAAACGGAAA 1944669 46 100.0 30 .............................................. TGTTAATTATTAAATCCGTTATAGTCTTTG 1944593 46 100.0 30 .............................................. TGCAAGGAATATATCGGCAAGTGGACTTTT 1944517 46 100.0 30 .............................................. TGCAAGGAATATATCGGCAAGTGGACTTTT 1944441 46 100.0 30 .............................................. GGAGTTCGATTATGACAGTTATTCTAACTT 1944365 46 100.0 29 .............................................. AAGAACTCTATCATTGTTAAGATTAAAGA 1944290 46 100.0 30 .............................................. CACCTAAGCGTTTTAGTAACGACTTTTTAA 1944214 46 100.0 30 .............................................. CTCTGCCGTATGATAATAAGATGTTACCCA 1944138 46 100.0 30 .............................................. AGAGGCAAACGATGAGCTTAGATAGCATTG 1944062 46 100.0 30 .............................................. AGTTCCAACAAGTAATTGAAAATCAAATAC 1943986 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 29 46 99.6 30 GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGTGATTGATAACAAC # Left flank : ATAGCCTATGGAGATCATTTGGTAACCCTACCCCTGTACTTAACAGGAGTAGTGATTATGAGTTATCTCTTTGTAAGAGAGAGACCCCAAGAATGCCTACAAAGTGCCTTACGCATTGTTCTTCCGTTTACGGGGTTAATGCTTATTGCAGGGAGTCTGCCTGATGCACATTTCAGTTTAGCTCTGATTTATATTGTGAGCACAGGGGCAGCTTTTTTATTAGGAATGCTCATTGCCACCGTGAGCAAGACGTACCAGAAGATAGGCTTATCGGCATTGACTTTTCTGCTGGTAGTTGCCGTACGGTTGTCGTTTTCAGCGGAGTTTCAATATTTGATAGGTGTACATTGGTATACCTTAGGAAGTTAATCATCTAATAGAATATAGAAAGAGGTTGCTCAGAAGTCTGGGCAACCTTTTTTATGCTTTGTTACTTATAAAATATTTTTTTTGTATCTTTGCGCTTTATTGTTGAACTATTTGATAAATTAAATATTTAT # Right flank : CTCAATCTTTTAAAGGTTTTAGTATCAATCAGTTTTGCTTAAAAACAGTACTGAAAAACCTCCTCTTTTACCTTATAAACAAAGGCTAAAGAGGAGGTTTTCTCTTTCCTATTCTTCTTAAAAAAGCTCTAATTGCACATAGGTTTCGGGAGCTGCTGTTTCTCTCTGACAGTAAAAGAACTCCATATCGCCAAACTGCTTATCGGTTAGACACATAATAGCTATATTGCCATACTGAGGTAAGTTTTGTTTTACACGATTGATATGCACTTGGGCATTCTCTCTACTAGGGCAATGCCTTACGTACATCGAAAACTGAAAGAGCGTAAAACCGTCCTTTATGAGTTTATCACGAAAGTTCTGTGCTTCTTTACGCATCTTTTTTGTTTCTGTTGGCAAATCGTATAATACTAATACCCACATAATTCTATAAGCATTGTATCGGTCAGCTATGATCATAATTCAGGATAAGCTATCAGTCGCTTTTCACCCGTATAGCA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGTGATTGATAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.74%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGTGATTGATAACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.14 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //