Array 1 32282-31947 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_APVG01000050.1 Aeromonas diversa CDC 2478-85 Cont50, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
     32281	    29	 100.0	    32	.............................	CTGACCCGCCTGGCGGATACCTTCAGCGGGAT 	
     32220	    29	  96.6	    32	............T................	GAGCCGGCGTAATGACCCCCGCCGAACTCCTA 	
     32159	    29	 100.0	    32	.............................	AAAATTCAATTGCTTGCAGCTTCATCGATATA 	
     32098	    29	 100.0	    32	.............................	GCTGTCGATGTGCCGAAAAACTTCACGATCAC 	
     32037	    29	  96.6	    33	............T................	TTCTTGGCATCGAGCTCGAACTCGCACTCGGCC	
     31975	    29	  69.0	     0	.........T..T.T......GA..GTGC	|                                	
==========	======	======	======	=============================	=================================	==================
         6	    29	  93.7	    32	CTGTTCCCCGCGCCCGCGGGGATGAACCG	                                 	       

# Left flank :   GAACCGACCGCCAATTCTTTGAGGCTATGGCTCACTT
# Right flank :  TCGATTGGACAAGCGCCATCACTTTTCCTCCCCCCCCTCTCACCCCTTCCTTTATCAATCTGATAATCCCCACCCGATTATTATCATTTTTGCCGTCTGGCTCCTTCGTGGGCTCCCTTTGGGCGCTGCGGCGGGGCGGTTTTTTTTCTGCCGTGCTCGTCGTCTCGGCCGGGGGCTTGCCGGCTTGTGGCCTCTTTTGTGAATGGGGTCACGCTAATGAGGGCGTTGCGGCCGCCGCGTTATTGCGTCGGGTGCTTGGCACGCTAATTGATTGCTCTGTGTTGACCGCGCTTTCGAGTGTTCACCCCGGTTCATTGTGATGGTGGCATTCGTTATTAACCCAGAGCGCCATCCATATTCTCAGTCAATGAGCGGGGCGAATGATGAAAGACGTGAACCAGTTAATTAAAGAGATCAAAAACCTCAAATCCGGCCTGCATGAAAAAGACTTTCTGCTGACCTGGGAGCAGACGCCCCAGGAGTTGGAGCTGGTATTAAAA

# Questionable array : NO	 Score: 5.95
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTGTTCCCCGCGCCCGCGGGGATGAACCG
# Alternate repeat :   CTGTTCCCCGCGTCCGCGGGGATGAACCG

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [4,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched CTGTTCCCCGCGCCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.10,-12.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [10-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [46.7-30.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.64,5.28   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//


Array 1 75209-75359 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_APVG01000015.1 Aeromonas diversa CDC 2478-85 Cont15, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     75209	    29	 100.0	    32	.............................	GCAGGGGTCTCAGTTGATGCTGCGCTAAAAGC	
     75270	    29	 100.0	    32	.............................	CTGGCGGAGCGCGTTGGCCTGCTCCTCCGCGC	
     75331	    29	 100.0	     0	.............................	|                               	
==========	======	======	======	=============================	================================	==================
         3	    29	 100.0	    32	CTGTTCCCCGCGCCCGCGGGGATGAACCG	                                	       

# Left flank :   CCGCTTATCGAGGAGGTGCTCTTGGCCGGGGGCATCACCCCGCCCGAAGCCCCCGCAGATGCCCAGCCCCCCGCCATTCCCGAACCCGCCGGCATGGGGGACGCCGGTCACAGGAGTCAGTGATGAGCATGCTGGTGGTGGTGACCGAAGATGTGCCGCCGCGCCTGCGCGGTCGGCTCGCGGTCTGGTTACTCGAGGTGCGTGCCGGTGTCTATGTGGGAGAGGTGTCGCGCCGGGTGCGCGAGATGATCTGGCAGCAGTGCGAGGCCTTGGTGGAGCAGGGCAATATCGTGATGGCCTGGCCTGCCAATAACGACTCGGGGTTTGACTTTCAAACCCTGGGCTCTAATCGAAGGGTGCCGGTGGACCTCGATGGTTGCCGATTGGTCTCTTTTCTACCCATTGAAAATCAATAGCTTAGCGTTCATTAACAATCTGGATTAGTCGGTGGCTTTTTTATGGTTGGAAAAAGCCATCAAAATCAATAGCATCTGTTAAGT
# Right flank :  CGCCCCCCGCAAGG

# Questionable array : NO	 Score: 5.67
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTGTTCCCCGCGCCCGCGGGGATGAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CTGTTCCCCGCGCCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-12.70,-12.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [65.0-3.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.14,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//