Array 1 20128-20646 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXZB01000032.1 Ligilactobacillus salivarius strain KLW006 NODE_38_length_20701_cov_2.86907_ID_5940, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 20128 29 100.0 32 ............................. ACTATCTTCATTCTCCCAAACTTCAAAATTAT 20189 29 100.0 32 ............................. AAGGCAGTATTTGCACGCTTATGATGCCAGCT 20250 29 100.0 32 ............................. GGTAAAACTGCCTTTACGTTTTTAGCCTTTGC 20311 29 100.0 32 ............................. AAGGGTCAGCATCAGATTGACTTTCGTTTATA 20372 29 100.0 33 ............................. ATCGACATTGTTTTTAGCTTGTGCCACAGACAT G [20394] 20435 29 100.0 32 ............................. TTTTCTTCTGGCATATCAGTTAAATCTTCAAT 20496 29 100.0 32 ............................. ACATATGCTAATTCTTCCTTAGCATCATCTGG 20557 29 100.0 32 ............................. CTGCCTTAGTGATTCCAATGTGTAAATGGCTA 20618 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 9 29 100.0 32 GTGTTCCCCATGTATGTGGGGGTGATCCT # Left flank : TTAGAGAAAGATAGTATTATATCAATAGGTGCCGTTAAAGTAGAAAATAATAGCAAGCATGACTATTATTCTCTTATTAAAGGTATAGAAGAAATTCCAGATGAAATCAGTGAGTTAACTGGTATAGGAATTGATGAATTGAATAAAGATGGTGAAGATATATATAAAGTTTTAAAAGTATTGTATGGGGTTTTAGATGATGCTATTATTATTGGGTATAATCTTAATTTTGATCTTAATTTTCTTAATAGAGAATATGAGCAATATACTGAACTTAAGTTAGTAAATAAGGTGATTGATTTACTCCCAATAGTAAAAAAACAGTGTCGTTTTTTAGATAATTATCGCTTAGAAACGGTATTGCAATATTTTGGTATAGAAAATTCTCATCCACATAATGCATTGGAAGATGCTAAGGCTTGTATTGAATTGTATGAGAAACTAATAAAAAACAAATAGTAGTAACTTCAAAAAGATCGATTTAATAGGGATATTTTACT # Right flank : GTTTAAGGAATATTATCCACTAGGATTATTTAGTGTTCCCCATGTATGTGGGGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCATGTATGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.50,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 58-268 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXZB01000043.1 Ligilactobacillus salivarius strain KLW006 NODE_48_length_14210_cov_2.9531_ID_5942, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 58 29 100.0 32 ............................. TGGTATCAAAAAGGCGGCAATGTATATTACGA 119 29 96.6 32 ............................C AACAATCTGCTTTATCAAGACAAATGCAACAA 180 29 100.0 32 ............................. TTTGAAGATGGCACAGCTTATTTAGCAGTTGC 241 28 86.2 0 ........T.......-C.........A. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 95.7 32 GTGTTCCCCATGTATGTGGGGGTGATCCT # Left flank : TCCCCATGTATGTGGGGGTGATCCTGTTTAAGGAATATTATCCACTAGGATTATTTAG # Right flank : TTTAGAAAAATTAAAGAAGTAAGGTCTTAAGTTATATTTCTAAAGTACTTTATAATATAGATTATAATATCCTCTGAGTATACAGATGAAATAGAAAATGACTCTGATGCTCAGGGGGTATTTCTATGGAAAAAAATCTAAATATTCAGTTGAAGGAAAACTATCAATACTTAATGAAACTTCACATATCGGAATTTTTGAAGTAACAATTAAGTATGGAATCGATTATAAAACTATTGGACGATGGAGACTGCTTTATCAGTATCAAGATCTTTAACCAAGTAATAGAAATCAGAATTATTCTAAGGAATTCAAGTATTTATTAGTTGAGCAATACAAACATTTAAACGAACCCGCGAAACTATTTGCGATAAAAAAGGTCTACGTTCAGTAATTCAGTTTAGGCAATGGATTATCTGATCCGGTATAATGAATCTAACTTAAGGACCAAGGACCCAGAAAGAGAGATTCAAAAAAAGAGTGGACGAAAGACTAGTTTT # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCATGTATGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //