Array 1 106318-105930 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFDQ01000016.1 Acinetobacter baumannii strain 4300STDY6542376, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 106317 28 100.0 32 ............................ TGATTGCGGTGATGAGACCATTTTGTATTCTC 106257 28 100.0 32 ............................ TGAATCGAACTTATCTAGGGCATGGCTTTATC 106197 28 100.0 32 ............................ TGAATCGAACTTATCTAGGGCATGGCTTTATC 106137 28 100.0 32 ............................ CTCCTCATCAAATAGGTCGGGCCAACTGGAAT 106077 28 100.0 32 ............................ TCCGCAAGCGTGGCTTCACTGTTAATTTTCGT 106017 28 100.0 32 ............................ AGTGGAAGAAGTCGGGCGAGATCATGATTTTG 105957 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 7 28 100.0 32 GTTCGTCATCGCCCAAATGATTTAGAAA # Left flank : GACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGGGATGAAGGAAAAAATTCTCACGACACTATTGCTGATATAGCCAACAGCTACCTCGATCATGGAAACTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGAATGGGAATTAGCTTTGCCTTACCTATTTTACACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTCGCTGATCTAGTTAAAGATGCTTTTGTAATGCCAATTGCTTTTACATGTGCAGCAAAAGGATTAAATCAGAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGCAGTAAAATCAAATAAAATCATACATTTAATCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTAAACTTAACTTT # Right flank : TCTGAATCTTAAAAAAATCCAAAAAATTATAGTTCAGGACTTTTCATTAATCTTGGTGGGCTTGATATCTCCCCTAATAGCCCATTGTAGAATCGATCTCTCTAATTAGGAGCGTGGTAAATGTTTTGACTTAGTAGGCCCATGCAAAAACTGCCCTTTCCGCAATGATAAGCTCGAACAAAAAGGCTGGTTAGGCTCTGCCCGTGCTCAGGATATTTTCGACAATTTAAAAGATGGTGGCTTCTTCCCTTGTCATAAAACCAATGATTATGTCCGGGATGAGAAAGACTATAGCGAATATGACGATGAATGTGAAAACGAACCAAAGTTTAAGATTCAGGGTCAACATCAGTTCTGTGCCGGTGCTTTAATTCTTATGGAGAAAACAGGTGCCGCAGACAGATCTCAGGTTATCCAAATTGCGGAACGATTAAGATTGTACAAGAAGGATAAACTAAGAATTGCCACCTCCTCTGTTTTCAATTCAGAGCTTGAGTTTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAAATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [71.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 111406-114075 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFDQ01000016.1 Acinetobacter baumannii strain 4300STDY6542376, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 111406 28 100.0 32 ............................ TTGTAATTGAGAGTAGCTAACAAAATCAGACT 111466 28 100.0 32 ............................ TTGTGCAAAACAGACAAACATTTGTAAGCGCA 111526 28 100.0 32 ............................ TGAGAAGATTAAACACAGCAATGTGATGATCG 111586 28 100.0 32 ............................ AATCTGTTGACCTTGAAAAACTGCAATATATT 111646 28 100.0 32 ............................ ATTGTGGTGTAGCAGGTTGGATTCGAACCAAC 111706 28 100.0 32 ............................ AATAGTAGATATATTGCTTAATGATACATCGC 111766 28 100.0 32 ............................ ATAACCTAAAGGCTCGAAGGGGCGGTCTGCAA 111826 28 100.0 32 ............................ AACCATCACGACACGGGCATTACCTGCTGCCC 111886 28 100.0 32 ............................ TCAGCTCCCCATTCGCTTTCACCCAACTTAAT 111946 28 100.0 32 ............................ TTATCCTTTTAAGATGCTTTGCGAAAAATACT 112006 28 100.0 32 ............................ GCATAGTTTTGCGCCCCGCACACAACAAAACC 112066 28 100.0 32 ............................ TCAAAATGAAGATGAACAGGCCAAGGCGATTG 112126 28 100.0 32 ............................ TGGATACTGTGATGAAACAAGAGAAGCCTACC 112186 28 100.0 32 ............................ TTGCAAATCTGGTACGACTCATTGGCAAAGTT 112246 28 100.0 32 ............................ AAGAAAAGAATTTCATGTTTGAAATGACGGCA 112306 28 100.0 32 ............................ AAGAATCGCACCTAGTGCCACATTAATTAAAT 112366 28 100.0 32 ............................ TAAGTATTTTGGAGAGTAGGCCAATGGGTTAG 112426 28 100.0 32 ............................ AGAGCAGTTTATTCGTGAGTTTGGGGTGGAGA 112486 28 100.0 32 ............................ TTTGATAAGAAGCAAAACTTTTAGTCTTTCCA 112546 28 100.0 32 ............................ TTCAAAATCACTTAAATGTTGCTCTGGAATGA 112606 28 100.0 33 ............................ AAATTGCGCCCATTTCAGCAAACATGTAACCCT 112667 28 100.0 32 ............................ CTCTTCAAAATACCACCCAACCCCGTGCGACT 112727 28 100.0 32 ............................ TTTCTGCATCCACACAACAAACATAAAGACTA 112787 28 100.0 32 ............................ TGATTGGTGTATTGAAGCAAGCGACTAGTTAA 112847 28 100.0 32 ............................ TGTAGTCTCAATCTTGAACCGCTGGCACACAC 112907 28 100.0 32 ............................ ATAGAAGAATCGGCAAGCGTATTCATAAACTC 112967 28 100.0 32 ............................ ATTATTGGTCAAAGATTGACTTAATATAATCA 113027 28 100.0 32 ............................ ATAGTAGTAATCGTTTTCAATGTGCTTGCGGA 113087 28 100.0 32 ............................ ATGAGTGAGTTTAAAGTCGGGGATAAGGTTGT 113147 28 100.0 32 ............................ TTAGCTCACATAATGAAAATTTGTCACTTTGA 113207 28 100.0 33 ............................ TTGGCCGTGAGTTCCCGACCGCGATTGGCGACA 113268 28 100.0 32 ............................ AACGTCGTTCGGTTACTTACATGAACGACCGC 113328 28 100.0 32 ............................ AGAAGCGCGTTAACATTCTTATGGAGGAGTTT 113388 28 100.0 32 ............................ CGCTGATTTAGATAAGAACGGGAATGTTCTTA 113448 28 100.0 32 ............................ ACACCGACACGCGTTTGAGCTAGCGTAACATC 113508 28 100.0 32 ............................ TTATATCGCTAAGATGCTTAACCAGCCACAAA 113568 28 100.0 32 ............................ TGCGCGAAATGGTGCGAAATGGCGGCATGTTT 113628 28 100.0 32 ............................ GGTTGTACAGGTCAATGGTGCAACGCCCGTTC 113688 28 100.0 32 ............................ ATTCAGTAGGGAAAGCTTCGCCGTATGGATTC 113748 28 100.0 32 ............................ AGACGCTACACGATCCTTATCTAAAGCCAATT 113808 28 100.0 32 ............................ TAGCGGAAAAAGTCTATGAGATCATGAAGGCC 113868 28 100.0 32 ............................ ATGAAGTGTTTAATTGGTACTGTGGCGAACCT 113928 28 100.0 32 ............................ CTTATGTCTCTCAATGGTGGTATTGATGATGT 113988 28 100.0 32 ............................ GAACCAAGATCAATCGTAGTGTTCGGGTTAAT 114048 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================= ================== 45 28 99.9 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : CTTTAAAAATAGAGGCCGTTTTACCTGCATTTGCCTGATAATCAGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTAAGATAAGGTAAATCAAGTGCTTGTTGCTTACTTAATCGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGCACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGGAAAATGAAAGTATTGAAGGAGAGAGTTGCAACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTCAGAAGATTAGGTTATATTTTTTAAAAATGGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : AGTTTCTTCCAAAATTTAAGACGATGTATTTTGTCGTTAAAAGGTCGTATTAAACTGATTAAAGCTAGAGGTGGTCCCACTTGTTTGAACAACTAAAAGCGTATTTATAAGTGATATTCCGCTCTAGTTAAGCCACCTTGTTTTGTTGGGGTAGCTGATCATAGTAAAACTCATTTGGTGTCATTTTGTCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //