Array 1 1978855-1977426 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH815185.1 Lachnoanaerobaculum sp. OBRC5-5 supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1978854 28 100.0 33 ............................ TATGTTTGTCGCCTGTGGCGGTTCGCTTGCTAA 1978793 28 100.0 33 ............................ TATTTGAAAATAGGGCAGGCATTCAATGAACAA 1978732 28 100.0 33 ............................ CATCTATCGCATCAACCTTGCCTGCTCCTGCTA 1978671 28 100.0 33 ............................ TGAAGCTTTAGAAAAAGCAAAGTACATGGTTGA 1978610 28 100.0 33 ............................ TAATGTCCTCGGCCTTTGCCTCTGTACTTACTC 1978549 28 100.0 33 ............................ TCCTATTTTTTCCAAATCGGAAATTAATTTACA 1978488 28 100.0 34 ............................ CCAAGATGGTCTATATTGGCAGAAGCGACAATAT 1978426 28 100.0 33 ............................ TAGCAAGTATCCTTTTGCACACGCAAGCCTTGA 1978365 28 100.0 33 ............................ TCAATCGGATTTGTTGCCCCTGTCATGCGGTTA 1978304 28 100.0 33 ............................ TTGGCCACAATCTAACTATAGAGTCAGTGAAAG 1978243 28 100.0 33 ............................ CAACTTAAAACTTTTTAAGCAACACCCGCTTGA 1978182 28 100.0 33 ............................ TCGCACGGGTGAGTATTCCACGATAAGCAAAAA 1978121 28 100.0 33 ............................ TCCAATATGGAAGCCGACAACAAAGACATATGT 1978060 28 100.0 33 ............................ CGACCGTGCCATAGTAAACGATAGTTTAATCAG 1977999 28 100.0 33 ............................ TTAGGTGAAGTCATGCAAATTCAAATAGATTCG 1977938 28 100.0 33 ............................ TAGAAAAAGAGCAGAAAATGCTTGAGAATAAAC 1977877 28 100.0 33 ............................ TATTAGATGAAGTGGAGGATACAGAGTGAATCA 1977816 28 100.0 33 ............................ CGCATGTGTATATTCCTTTATCTTCAGCGTTCG 1977755 28 100.0 33 ............................ TAAAGCTGTAATCTATGATGTTGCAAGATATGA 1977694 28 100.0 33 ............................ TGGGCTCACCACTTCCGAAAAGGTATGAATTTT 1977633 28 100.0 33 ............................ TAGTAAGAGAGGTAGGATAAATGTCGAAAAGAT 1977572 28 96.4 31 ...................A........ CTATTCTATTCACGATTTTTTTCTTCATCAG 1977513 27 78.6 31 ..A.....T.....T..A...-...A.. TACCACATATTATGTTCCATCACAATCAGAA A [1977488] 1977454 28 85.7 0 ..A...........T.....A..T.... | C [1977429] ========== ====== ====== ====== ============================ ================================== ================== 24 28 98.4 33 GTGTTCCCCGCGTAGGCGGGGGTGATCC # Left flank : GAAGTGTTCCCCGCGTAGGCGGGGGTGATCCTCTGGTTATATTCCAATCAGGTTTTCTGTTATTGTGTTCCCCGCGTAGGCGGGGGTGATCCCTGAGTTCCGGCAACTCCTCGGAACTGAGTTCCGTGTTCCCCGCGTAGGCGGGGGTGATCCTCAAGAAAAAGCAATGCAGTCAAATAAATCAAAGTGTTCCCCGCGTAGGCGGGGGTGATCCCATACATAGAATCATTCATTTCTATGTAGCAAAGTGTTCCCCACGTAGGCGGGGGTGATCCCTGAGTTCCGGCAACCTCTCGGAACTGAGTTCCGTGTTCCCCGCGTAGGCGGGGGTGATCCTATGTTTGTCGCCTGTGGCGGTTCGCTTGCTAAGTGTTCCCCGCGTAGGCGGGGGTGATCCTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : TTATATTAAAATTTGTATCCTTTGGTAATTTTGTCTTATCCTTATATGCAGAAGTACTTTGAGATATTTAAACCTGTATTTATTAATGAGATTGTATAAGTAATACTATAAAGAGAATACAAATACCGTCACCTGCTTAATATATCCTGCAGGGCATCTGAATCCAGTATTTTGATTACAGGGGGATTATAAAAAATAATTTTCTCGGATTCCAGGCGGCTTAATTCCCGGTGCAGGGAGGTTCTGGATACATTCATAAGCATTGCCCATTTTGAAATGCTGTCAGGAATTGTGACAGTATCTTTACCTGATTGACAGGACTGCATTAAAAGCCAGAATGCCGCTTTTTGTGCGATGCCTCCGTAGGAGAGCAGCTCAAGTCTTTGCTGAAGCATATAAGTGGCAGTGGAAATTTCGGTGGTGAAATTTTGTAATATGCAAAGATTTAATTGCATAAGCTTTAAAAGCTCATCTCTATGTAAGAGCATTATCTTTGCAGG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTAGGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.90,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1979901-1978958 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH815185.1 Lachnoanaerobaculum sp. OBRC5-5 supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1979900 28 100.0 33 ............................ TCCTGTATGATGTATCCTATCACCCTTAAAAAA 1979839 28 100.0 33 ............................ CTAAATACCCTGAAAAGATGCAGGAAGCCGCAA 1979778 28 100.0 33 ............................ CCGCCAAATTTACCATATAAACTATTTTGAAAC 1979717 28 100.0 33 ............................ CTGCCGTCAGGTAGCTACAGATGTCAGATTTAC 1979656 28 100.0 33 ............................ TAAACTTGCAACCTCTTGCAACACACAAGTAAG 1979595 28 100.0 33 ............................ TTCGAGGCAGTTTAAAGGTGATGTCCATGAAAC 1979534 28 100.0 33 ............................ TGACATGGAGGCAACGGCGTATCAGTTGTGGGA 1979473 28 100.0 33 ............................ CAAAGGCACAACACTTGCCCAATTTGTTCTTGG 1979412 28 100.0 33 ............................ CTGGAGTGATATCGAGGTTGAAGAGTATGAGAA 1979351 28 100.0 33 ............................ TCTGGTTATATTCCAATCAGGTTTTCTGTTATT 1979290 28 100.0 33 ............................ CTGAGTTCCGGCAACTCCTCGGAACTGAGTTCC 1979229 28 100.0 33 ............................ TCAAGAAAAAGCAATGCAGTCAAATAAATCAAA 1979168 28 100.0 33 ............................ CATACATAGAATCATTCATTTCTATGTAGCAAA 1979107 28 96.4 33 .........A.................. CTGAGTTCCGGCAACCTCTCGGAACTGAGTTCC 1979046 28 100.0 33 ............................ TATGTTTGTCGCCTGTGGCGGTTCGCTTGCTAA 1978985 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 16 28 99.8 33 GTGTTCCCCGCGTAGGCGGGGGTGATCC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : TATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTTCCCCGCGTAGGCGGGGGTGATCCTATGTTTGTCGCCTGTGGCGGTTCGCTTGCTAAGTGTTCCCCGCGTAGGCGGGGGTGATCCTATTTGAAAATAGGGCAGGCATTCAATGAACAAGTGTTCCCCGCGTAGGCGGGGGTGATCCCATCTATCGCATCAACCTTGCCTGCTCCTGCTAGTGTTCCCCGCGTAGGCGGGGGTGATCCTGAAGCTTTAGAAAAAGCAAAGTACATGGTTGAGTGTTCCCCGCGTAGGCGGGGGTGATCCTAATGTCCTCGGCCTTTGCCTCTGTACTTACTCGTGTTCCCCGCGTAGGCGGGGGTGATCCTCCTATTTTTTCCAAATCGGAAATTAATTTACAGTGTTCCCCGCGTAGGCGGGGGTGATCCCCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTAGGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.90,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [5.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 1981141-1980442 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH815185.1 Lachnoanaerobaculum sp. OBRC5-5 supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1981140 28 100.0 33 ............................ CACTGGATATAGGCACGCTGACAGCGTGCAGAG 1981079 28 100.0 33 ............................ CAGCGATTTAACAAGCATCAAGAAAGATATATA 1981018 28 100.0 33 ............................ TTCCTTTTTTTAATAAAGGAAAGAGATTAAATG 1980957 28 100.0 32 ............................ TGAGAAGAAAATAAATGATTTGCTATCGATAG 1980897 28 100.0 33 ............................ TCGCTTATATACTTTTCTCTTTTTTCTTTAAGC 1980836 28 100.0 33 ............................ CAAGGGTACAACGCTTGCTCAGTTTGTACTTGG 1980775 28 100.0 33 ............................ CTACATTATCTGCAGTAACTGCTTTCATTCCTA 1980714 28 100.0 33 ............................ CCGCATTTTCTCACTAGTGGAAATATTTGAAAC 1980653 28 100.0 34 ............................ TACTATACTCCCTTTATGCGGTTTAGTATCCCAC 1980591 28 100.0 33 ............................ TATCATCATTAAAGCGGTCGTACTCTTGCCATC 1980530 28 100.0 33 ............................ TGTCATCAGGTACGGTATAGCCGCCATCGGCCT 1980469 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 12 28 100.0 33 GTGTTCCCCGCGTAGGCGGGGGTGATCC # Left flank : AAAGAGAAAGACTATATTATTGAAATAGGTGCGGTAAAGTCTGTAGGTGGAAGAATAAGTGAGTTTCAAAGCTTGATAAGCTATGAAGGTACATTGCCAAAACATATAGTGGCAATGACAGGTATTACCACGAATATGCTTAAAACTAATGGTAAGAACGTAGAGGTGGTATTAAAGAATTTTAAGGAATTCATAGGTGATTTGGATATCATAGGATATAATGTAAGTTTTGATATTGAATTTATAAATATTGCACTGTCAAAATTTGAACTTGAAAACCTTGAAAATAAACGATATGATTTGATGAAGTTTGTAAAAAATGAGAAACTATTTTTGGCAAATTATAAATTACAAACTGTAATAAAGGAATATGGAGTTGGCAACGAAGTACCACATAGGGCATTGGAAGATGCAAGACTAATATACAAGCTTGCTGTAAAAGTAAATAAATTCAGGGATTTATATAGTCTGACATAGCGTGTTTAAGGGATCTTATTACT # Right flank : TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTAGGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.90,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 2816952-2818337 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH815185.1 Lachnoanaerobaculum sp. OBRC5-5 supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================= ================== 2816952 36 100.0 44 .................................... TTGCCAGCTGAATAGTTCTGTATACTCTTTCCTTTTCGCTCTTA 2817032 36 100.0 41 .................................... TCTAATTGATATATACAGTACAATTCAAGAAAGTAATAATG 2817109 36 100.0 35 .................................... CGGTACATTTTTGCTATATGATACACCGGTTCCTG 2817180 36 100.0 37 .................................... CTGTCATAAAGCCTGCTTCATACTCTATGGTATCACC 2817253 36 100.0 36 .................................... TCTGAATACTAGTTATCCATCCTTCGTCAAAGCCGA 2817325 36 100.0 40 .................................... CATTGATTAAATATACCAAAAGCTTCTTTAAACGTATACC 2817401 36 100.0 37 .................................... CACTGAAAGGGTTATAGTCATCGAATTTTTGATTATC 2817474 36 100.0 36 .................................... TCTGAATACTAGTTATCCATCCTTCGTCAAAGCCGA 2817546 36 100.0 44 .................................... CTGCCGACAATCGTTGTTGTTTTTCCGGATCCTGCTACAGCGGT 2817626 36 100.0 45 .................................... ATAGAACCATCAGCTCTTAGAAAATACCACTTACCTGATACATTA 2817707 36 100.0 36 .................................... TTTTACCCTGTTCCATCGAACTACAGATAAATTCTA 2817779 36 100.0 35 .................................... ACAGATAGATAATTCGAAAGATAAGGTAGGGTTTT 2817850 36 97.2 40 ..................T................. TTTTTCTCTTATAAACTCTGTTTCACCGTCAATATAGTGA 2817926 36 100.0 42 .................................... GGTTGTAATACAAACCTTATCCAATCAATAAGAGAAGTTCTT 2818004 36 100.0 37 .................................... ACACTAAGGTACTCGTTTACAGCTGTCATGAAAAATT 2818077 36 97.2 36 .........................T.......... CAAGTTAGATGAAAAGGGTAAATGGGGTAGAATAAA 2818149 36 100.0 39 .................................... TGCCAAACGCTGCAAGGTATACAGCTATGAGCATATCTC 2818224 36 94.4 42 ...........TC....................... GTTGTCTGCATAAATATATCAAGTCGCACTGCTACTAAAACA 2818302 36 83.3 0 ...........T...................ATCTA | ========== ====== ====== ====== ==================================== ============================================= ================== 19 36 98.5 39 GTTTACAGAAACTAACCCCGATAAGGGGACGGAAAC # Left flank : GAATAAATATTTCTCTGGCTTATTGTGATAATTGTGGATATCAATGGAACAATATAGGCTTTGAGAGACCGGATACTTGCCCCAAATGTGGCAAAAAGGAAATGACCATGATAGACAGAATGTGCGGATATATAGCTTTTACAAAAATCCATGGTAAGTCCAGACTGAATGATGCTAAGATGGCAGAGGTACATGATCGCATTTCGATGTAGAACATTTAATTAGATATTGCTTGGATAAAGTTATGATATGTGTTAGAATGATATAGTCTTGAATTTTTAAGACAGTTTGTAGACACTTTATGATGTGCCATATATTCATACATTTTGTTGTATAATTCTTTTAAATATAGTGATTTTTAGACGGCCCGCATAAAATAAGGGTTTGTAGCACTTCGAGTAACATAAATTACGAAAATTTTGGCTAAAATCGCTTGTTAAATTTTAGGCACGCTAAAGCCCCTCAGAGGCCTTTATTTATAAGGGATTGGAGGGGGTAGG # Right flank : AAGAATATTGTTATTGAAAAATATTTATATTCATCATAAAATAAAGCCAAGTGAATGGTACTTATTTTATTTCTATTTTCATTTACAAATATTATTTCTTAAAACAATTTCTTTTAAATCTAATCAGTCGCATTAAGGGAGGTCGTATGAAGGGCAACAAAGAAAAAGATATTACACAAAAGACACTTGAAAGGTATAATGATGTATTCGCAGATATTATAAATGTTTTACTGTTTAACGGCGAGAAAATAGTAAAGGAAGACAGCTTGACAGATGCACTGACGGGAAGTACTTTAAAGATGGATGGCAGGATAAGGACACAGTATAGGGATATAGCAAAATATTGGCATAACAGTAAGATAAAATTATCAATGTTCGGATTGGAGAATCAGACAAAGCCGGAAAAGAGAATGCCGCTGAGGGTATTTGGATATGACGGAGAGGAGTATGTCAAGCAGGCCAAAAAGGAGAACAGTAAAGAAGTAATTTATCCTGTGATT # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACAGAAACTAACCCCGATAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.60,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //