Array 1 144934-146791 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADQVQ010000002.1 Corynebacterium diphtheriae bv. mitis strain 03-15 NODE_2_length_261248_cov_47.561763, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 144934 29 96.6 32 .............T............... AAATTGAGCAAATTAACGAAGGAAAAGAAAAA 144995 29 96.6 32 .............T............... CATGTACTACTCGCGTCACCCATTGTCGAGAC 145056 29 93.1 32 .............T..............T CCGCTCAGAAGCGGTATGCACAGTGCGGCCCG 145117 29 96.6 32 .............T............... CAAAAAAAGTGCTTTGACATGCAATTTAATCA 145178 29 96.6 32 .............T............... AATCAACGCGACGGCGCGACTACCGCGGGTAG 145239 29 96.6 32 .............T............... GGCGAACTCATCGAAACACGCCCCACCCCACT 145300 29 96.6 32 .............T............... GTCCGCGGCGGCGGTCACACAGGCGGGCATAC 145361 29 96.6 32 .............T............... ATAGCCAAGGATCGTCACGCTACGCTGCTGAA 145422 29 96.6 32 .............T............... GGGGTAGGGCGCCAAATTTGCAAAATGCATAG 145483 29 93.1 32 .............T..............G CCCGCCGCGGACGCGGTGCCATTCTTTAGATA 145544 29 96.6 32 ............................G GCCGCCAGCACCTCAAGGCATCTACCCTTGAC 145605 29 96.6 32 ............................T GACCTAGCAAAACGCCTAGGCCTAGAACCCAA 145666 29 96.6 32 ............................G CAGATGATGGAACCACAATACGAATGGCGTGC 145727 29 100.0 32 ............................. TTCCCACACAGACTCTTTCGTGGCTTCGTCTT 145788 29 96.6 32 ............................G CACTGAGCCTAGCGAAAAAAACTGTTCTTGAA 145849 29 100.0 32 ............................. GCGGAGACGGATCGATCATACAACATAATGCA 145910 29 96.6 32 ............................G GGTCATGGATTAATCCACAGCATGGGAAAACC 145971 29 96.6 32 ............................G CAGGAACGGCGACAAGCGCTACAGCAGACAGC 146032 29 100.0 32 ............................. ACCACCGTCGATCTACCAGGCGTGACCATCAA 146093 29 100.0 32 ............................. CCGTCGAATCCTCGAAGACGTCAAAAAGATTG 146154 29 100.0 32 ............................. CTGCTCTGTATCCGAAGTCGACAGGGAATAAT 146215 29 100.0 32 ............................. GCCCAAAAGTCGGGGCTTGTCCTCTCGCTGGA 146276 29 96.6 32 ............................G TAGTGCAAGTTGATTGGGAAAAATTATTTGCC 146337 29 100.0 32 ............................. CACTGTGAAGTTGATTCTTCAGAAGGTTAGCG 146398 29 96.6 32 ............................G ATTGGACGAACGCCCAGCTGAAAGAACGAGAT 146459 29 100.0 32 ............................. GCTAAAGCACAGCTCGCGGAACGCGAAAAGCA 146520 29 100.0 32 ............................. ACCGCAGTTTTGAGCATCTCCCAGCCTGTACG 146581 29 100.0 32 ............................. AGATCGTTAAACCAATCTGCTTGCTTTGCGGA 146642 29 100.0 31 ............................. GCCAGGAATCGACCAAGAAGCCTTTGACCGC 146702 29 89.7 32 .G...T......................T TGTGACTGATGAATTTTCTTCTATTACAGCCC 146763 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 31 29 97.5 32 GTTTTCCCCGCACCAGCGGGGATGAGCCC # Left flank : ATTACTTGGAAAGAAGCTGAGGCATTGGCTGGAAACACAGTGCGCCTGCCGGCCCGAATGACACGTAGCGAGCCGGATTTTAATGCCGTTATTGATTCGCTCGAAGCACAAACACCACCAGAATGGCAACGATCCGGTTTGCTTAAAGGCCAAGTTGCGTTGCTTTTCGACGAAAGAGGAGAGGCTCGTGTAGGTCGATTCCTAGTGCGTTATACCAATGAACGTGGATTAGAGGTGGAGGTCTGCCCAAAGGAAGACGCGTAAAAGGAAACCCCGCTGGTGCGGGGAAGTATGCCTATGTAAATCTTGTAGAGATATTAAAAAGGCTCATCCCTGATCGCAGGGAACAATGCCAGCCTATGGCTAGAAGAAAGGACTAAGCAAATTTGGGTGAATGGCTGATCCTAAAACAGTAGAAATAAAGATGAAGCAGAAAAATTGCTGAAACAAAGTTATATGTAATAAGCTCTAACTGGCTCTAAACGTGCAGCTTGATAAGT # Right flank : CAGGGACTTTGAGAACTGGACCGCCGTGATTCCTTGCACTAGCAGGGTGGATGAATCTTTGTTGAAGAACGGGTTTTGGGATCTGTGTTTTCATTCAGAGAAATCAGTAAATGATGGGTCTACTAAAAAATTTTGAAAAAATTAACTTTTAATATCTATAAAGTGTATTCTGTGGAGAAAGTGCTTCCTAAGTTGGGAGTTTTAAAACAATCAGGAAGGAGTTGGTGGTGGCTTCGTTACTGGAGATCCGCTGGATTCTGGCTCTTGATACTCAAGGTAACCAGATTTCAGTTGGAATACGAGATATTTTCGCGGGGGAGGTGCAGGTTGCCTATATTCAGGGGGAGTCCCCAGCTCAAGACTATGCTGTGATGCGGCTTTTGCTGGGTATTTTCTGGCGTGCCCATTCCATGGATATCGACATGGACGTGGAACCTTTTGATTTTCTTGAATGGTTCAACAAGATGAGACGTCAGCTTGCTCGAAAAGGGAAAGATCAG # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.54, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCACCAGCGGGGATGAGCCC # Alternate repeat : GTTTTCCCCGCACTAGCGGGGATGAGCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCCAGCGGGGATGAGCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.70,-12.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //