Array 1 6824-8771 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWTG01000042.1 Streptobacillus moniliformis strain A378/1 contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 6824 36 100.0 30 .................................... AAAAAAATGTGAAAATGTTTCTTATAATAA 6890 36 100.0 30 .................................... GTGGTCTTTTGAAAGCTGAACCATACTCTC 6956 36 100.0 30 .................................... CTTTTCTTCTTTTCTCATCTCAAAAAAGGT 7022 36 100.0 30 .................................... AACGGAAAATACACTTCACGAATAATAGAG 7088 36 100.0 30 .................................... AAGAACACCAAAAGTCGAAAGAGAATATTC 7154 36 100.0 30 .................................... TCGAATATGAAATAATTAAAATAGAAGAAG 7220 36 100.0 30 .................................... CTGACGGAAATTTAGAATTGAAACATATAG 7286 36 100.0 30 .................................... ACCAAGTGCTGTTGAATAATTTGCTTCTAC 7352 36 100.0 30 .................................... TAGTTTTTTTACTGTTTTTATGTAAAATCT 7418 36 100.0 30 .................................... AGGTCAAAAGATAAGTGTTGAGAATGAAAT 7484 36 100.0 30 .................................... ATATCTCGGCTTTGTTCTCATATTGTTTAC 7550 36 100.0 30 .................................... TGAAGAAATGGTATATCAAATGACAATGAA 7616 36 100.0 30 .................................... GCAAATAGGAAAAGCAATAAAAGAAACTAT 7682 36 100.0 30 .................................... AATGAAATAGGAATACAATTCAACCCTTTT 7748 36 100.0 29 .................................... GCTTTTTTGCTTCCAATTTTAGTATATAT 7813 36 100.0 30 .................................... TACAGAAAGAGAAATAAACAGAACAGCTAC 7879 36 100.0 30 .................................... GGTTGGAGAGGTATATATGACGAATATAGA 7945 36 100.0 30 .................................... ATAAAAAATAGTTGACTTTTAATTTACAAA 8011 36 100.0 30 .................................... ATCCTCTATTGGCTGGTTTAGGAGGAGCGA 8077 36 100.0 30 .................................... ATTTTACATAAAAACTATTAAAAAAAACGA 8143 36 100.0 30 .................................... GTTTAGCGGTTATAAAACCAATGCCTACAT 8209 36 100.0 30 .................................... AGAGAAAAAGTCGGAAGAAATGTATAACAG 8275 36 100.0 30 .................................... TTTCCCCTCATTTGCATCACTCTTGAACTG 8341 36 100.0 30 .................................... GAACGTCTAACAAATTCGCCAATTCCGGCG 8407 36 100.0 29 .................................... GTTTTCTTTTGGATTAACATTTGGATTGT 8472 36 100.0 30 .................................... GATTGAAAATGAACCAAATAATTCAAGGAT 8538 36 100.0 30 .................................... CTGTAACTTTAGAAAAGCTTAAGTTTAGCA 8604 36 100.0 30 .................................... CTTTTTGTAATCTGCGTATATCTTTGTTAT 8670 36 100.0 30 .................................... TTTTTTAAAAAAAAAGGCTTAAAAATCTGA 8736 36 77.8 0 .............AC.......A...G..T.TTG.. | ========== ====== ====== ====== ==================================== ============================== ================== 30 36 99.3 30 GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Left flank : AAAAGTTATCTAAACTTTTTAGAAGAAGGTAATGAAATGCTGGCTATACCTGAAATAATAAAAATAGATTTTTATGACCTTTTTAAAGAGTTATAGAGAAATGAGATTACTTGTTTACTTTGATTTGCCAGTATCAACTAAATTAGAAAGAAAACAAGCTCAGGATTTTAGAAAAAATTTGTTATCTGAAGGATTTATTATGATGCAATTTTCTTGCTATTCAAGATTTTGCAGAAATGATGCTGAATCTTCAAAATATTTTAATAGAGTAAAAAAATTGAGTAATAAATTAAGTGGTGGAGAAGTAAGAATTTTAAAAATTACTAACAAACAATATGAAAATATGTTAATATTAGTAAAAGAACCTAAATTATCTGAAATAAAGCTTTCAAAAAATCCATTGGTTATTTTTTAGTGTGAATTTTGTGCTAATGGATTGATTATTTAAATTTCAAACTGTATTTTCTAGCAATAAAATTATATTAATTTCATTGCTAGAG # Right flank : TTGACTTTTTTAAATATTATGCTATAATAATTGTGTAGATAAGATTCACATTATTCAAGTTTACTACAGATTCTGTATTAAGATACAAAATCGTAAGACTGGCTGCCTTAAGCAGCTTTTTTTATTCTATAGGA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //