Array 1 2405-76 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRHX01000025.1 Megamonas funiformis strain AM23-11 AM23-11.Scaf25, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2404 30 100.0 36 .............................. TAAGTTTTAGCATTTGCCACTTTATTTCCTCCTTTC 2338 30 100.0 35 .............................. TCATAAATTTTATCGTAATATCGAGGGGGACGACA 2273 30 100.0 37 .............................. TAGTATCCTCTATCATTATTTTTCTTGATTGCTTTAT 2206 30 100.0 34 .............................. TTTTAGTTAATTCTAGTGTTTGACCAGCTTCTAC 2142 30 100.0 36 .............................. AAATTTTTCTCTTTCTTCTGTACCAACTTGAACTCT 2076 30 100.0 35 .............................. ATGTTATTAGGATTTTGCAGGAACGAAATAAGTTC 2011 30 100.0 36 .............................. GACGTAAATTTCTCTAGCCAACCTCGACCAATACCA 1945 30 100.0 36 .............................. TTTTCTTTGGATTTGAGCCCCCCGACTTGAAACCTT 1879 30 100.0 34 .............................. TAAAAATTAACAACTCCTTATCAAGAACGTGGGG 1815 30 100.0 36 .............................. TGCTTACCTTGGCCACAAAAAGGCCCCGGAGTAGAA 1749 30 100.0 34 .............................. GCATTTAAAATTAACTCTGGTGCCCAATCAATAG 1685 30 100.0 35 .............................. TTTAATCGCTAAAGATACTGAAGATGAGAGAGTAA 1620 30 100.0 36 .............................. CTAGCATTTGCACCTTGTGCTACCATAAAATCTGCA 1554 30 100.0 36 .............................. TATCCTGCGGAATAACATCAATGATATTTCTAATTA 1488 30 100.0 35 .............................. GATGATACATTGATGGGGAGAATGAAAGATACTTT 1423 30 100.0 36 .............................. TAGTTTTAAATCCTTATGGGATGGTGTAGGAAATTA 1357 30 100.0 36 .............................. TCCATGTGTGTACAGGATATTGATTTTTGCCAATAT 1291 30 100.0 36 .............................. TAACCTACATAGACATTCTGGTCTACAGCTTTTTGA 1225 30 100.0 36 .............................. ACGTTTGTATGAGCGCGACGCTAGAGGTGGTACACG 1159 30 100.0 35 .............................. TCTTGGGCATTGCCCTGGGCGTAGATTTCTTTATT 1094 30 100.0 36 .............................. TCGCCCTGGTATCGGTCGAGGTTGGCTAGAAAAATT 1028 30 100.0 36 .............................. TGGTATCCAAATACCTGGTCATCTTGGGCATTGCCC 962 30 100.0 35 .............................. TTGTAACATCTCCTTTATATAAAAATAAGGGGGAT 897 30 100.0 36 .............................. TTTATCTGCATTTTATTCATAACCGTTTCATTTTCC 831 30 100.0 34 .............................. AACCTAGTATAAAAATTATACTTCTTCAATTATA 767 30 100.0 34 .............................. TCTACAGCATTGCCTTGAGCGTAAATCTCTTTAT 703 30 100.0 36 .............................. TGTACACACCTAATAGCCCATTGCCGACTTTTTTCC 637 30 100.0 38 .............................. ACAACTCCTTATTAAGGACGTGGGGGATACACCCCCAC 569 30 100.0 38 .............................. AACCAGTATTACTATCTTTCCCACTTGTTAAAGGGTAA 501 30 100.0 36 .............................. TTCCTAGATGAATTGTCTGTATTTTCTTTTATTTTC 435 30 100.0 36 .............................. CTTTTAAATTTAAACATTTTATTATTCCTTTCGTAA 369 30 100.0 35 .............................. TTTCTAATATTATTAGTCGGATGCTTTAAAGATAA 304 30 100.0 36 .............................. TGAACTTTAGTTCGTGTCAACACTTATTTTTATTTT 238 30 100.0 36 .............................. CCTTATACCTAGCAATGCAGGCATCAACACACATCA 172 30 100.0 37 .............................. TATAAAAGATTTTATATTAATGAATATAAATATATAT 105 30 83.3 0 .......................CAAA..A | ========== ====== ====== ====== ============================== ====================================== ================== 36 30 99.5 36 ATTTAACTTTAACAAGTGTTGTATTTGAAT # Left flank : TTATCCTCTTGCTAAAAAATATTTAAAAGGTTGCAGTGGTGTTATCACTTTCGTAATCAAAGGTGGCAAAGAAAACGCTGTCAAATTCATGGACTCCTTAAAATTAGCTTCTAATGAAGTTCATGTTGCCGATATTCGTACTTGTGTTCTTCACCCAGCAAGTGAAACACATCGTCAATTGACAGATGAACAACTTGAAGCAGCTGGTATCAATAGCGGTATGGTTCGTTTCTCTGTAGGTCTTGAAGATATCAATGATATTTTAGATGACTTAAAACAAGCTTTCGCTAATGTAAAATAATTATTTAAAGGCATTTGTGTAAACAAGTGCCTTTTTTATTTTCCCAGCCATTTTCTAGTTTAAAACCTGAAATTCTTATAAATAAAGGATTTATAAAAAATCACCAAAAATCCTCAATCGCTGGTAAAAAATCGCCTAAATATTGATATTTCAACTTTTATAAACTATAATTATTTATAAAAGTATTAATTTTACTGGC # Right flank : ATAAAAGCTGTAACAAAGTGATATGCACCCAAAATATTGGACATATTAATTAAGCTACTAATTGAGACTTAGTTCT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAACTTTAACAAGTGTTGTATTTGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 1 4893-7094 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRHX01000008.1 Megamonas funiformis strain AM23-11 AM23-11.Scaf8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 4893 30 100.0 39 .............................. AGGCACAAAAAAAGAGATGTAGTGTATACATCTCTCTTA 4962 30 100.0 36 .............................. CGATTCTTTCTACATATACTTTGTCAACAATTTTTC 5028 30 100.0 35 .............................. ATCCATTCTTTTTTGGTCATATAGTTTTGCTTGTT 5093 30 100.0 34 .............................. TTAATAGTATTTATAACATTACTTTGCTTACTAA 5157 30 100.0 36 .............................. TAATTAAACGATTTTCTTTATCTAGATTGTTCATAA 5223 30 100.0 35 .............................. TGAGTTTTTATTTACTTAGGCTTATTAAGGGAGTT 5288 30 100.0 35 .............................. TCATTTGTGCTATTACTTGCGGATTTAACATTTTT 5353 30 100.0 34 .............................. TCTAGTTCTGTCCATGTTTCAGCTTTTCCATAAT 5417 30 100.0 36 .............................. TATATTGGGTAAAAATTATAGCAATTATCATCTATT 5483 30 100.0 36 .............................. TTTCTCTGATTATTATCTTGTACATTATTATCTTTT 5549 30 100.0 36 .............................. AATATTCCGTTTATAGCTTTTTCTCTAACAGCTTCA 5615 30 100.0 34 .............................. AAGCATAAGAAAAGGCAATGCCTTTATATGTAAA 5679 30 100.0 36 .............................. CTGGTAAAATAAAAATTGATGAAGCAATAGAAAATG 5745 30 100.0 35 .............................. TCCTCGTAGTCTTCTTCTAGGTACTCAATGTCGCT 5810 30 100.0 36 .............................. TCTTTCTCACCTCATTTATTGATGTAATCTTTCTTT 5876 30 100.0 39 .............................. TACCTAAATTTGTTGTCCCTCTATGGCTATATCTTCCAG 5945 30 100.0 35 .............................. ATAGCATCTTTTTGCAAATATAAGATGATATTGAA 6010 30 100.0 36 .............................. GTGCAAAAAACTTAAAAACATCCATACAGATGAATA 6076 30 100.0 36 .............................. CCCTTCCAGTTTCAATATAAAATTTATACTCCGCCA 6142 30 100.0 36 .............................. GGAGGATAGTTAAAGTTGATAAGTACTCCTTCCATA 6208 30 100.0 36 .............................. TAATGTACCAATTGCTAGAACTGGACAACAACTATA 6274 30 100.0 35 .............................. TTGGTAAAAAAATATAAAAGAATTGGGAAAAATGT 6339 30 100.0 37 .............................. GTACTTTGTTACTGAAAAAATAACATTAGATGATGAA 6406 30 100.0 36 .............................. GTGTTGGATTAGTCGGTATAATAAATGGATTATCCA 6472 30 100.0 36 .............................. TGTAGACGCTCTTTGTTTGTTGAACATCTGTATCTA 6538 30 100.0 35 .............................. TTGTTTTTTTTATCTTCTTTTTCTATGTCTATCAC 6603 30 100.0 37 .............................. TAAATATTTGTCTGAACTTGAGCCATAATTTGCCCAC 6670 30 100.0 37 .............................. TTGGGGTCTTTAAGTGGTAAAGAAGCTATCTTCATTT 6737 30 100.0 37 .............................. TGCAGATTAAAGCTCCTGCACTTTGAAGTAGTAAGTT 6804 30 100.0 34 .............................. AATAATGCAAGATACTGGAGATACTACAAATAGA 6868 30 100.0 34 .............................. AATAATGCAAGATACTGGAGATACTACAAATAGA 6932 30 100.0 37 .............................. TTATTATTATGGTGGCACATACGGCAGATATTGTTTT 6999 30 100.0 36 .............................. GGTGTAGTTCCAGTAGCAAATATCGGTAATGGTTAC 7065 30 93.3 0 ........................C.A... | ========== ====== ====== ====== ============================== ======================================= ================== 34 30 99.8 36 ATTTAACTTTAACAAGTGTTGTATTTGAAT # Left flank : CTACCCAACAATTAAATAATAATAGGTTATTATCTGAAAAACAAATCATTTATATGTTAAATGTATTCTATAATAAAAGAGTTGATGTTTCTTTCTATAATCAAATTATTGATTGCTTTATCTATAAAATTTATATTTACTCCGACAAAATATGTATTGTCTATAACCTGAATAATAGTGATAAAGACGTGACTTACTCTGATATTAACGAACTATATAAAAGTTCGCACCTTAACTCATGCGGTTCACCATATAATTTATAAAATTAAAGCAACTATCATTGATAGTTGCTTTTTATTTTTCCTAAATAACTAATAACCTTTTATTTATTCTCAAATTTTACCAACTAAAATCAAACAAAACTACGCTAAAGCTTGAAAATTAAACCTTTTTATAAAATCTCCAAAAATCCTATTATCGCTGGTAAAAAATAACTAAGTTCCTTGTATATCAATACTTTTAATAGTATAATGAAAATCATAAAGATTGATTTTTCTAGC # Right flank : TTTTATTATTAAAAAATTATAAAAGGCTTTTAATAGATTTTGTCTTCTATTAAAAGCCTTTTTCTATTTAGAATTATTTTTCAATTCCTCTAAAAATTTCTTATCATCTTTGCTTAATTCTACTTTTTCAAGTAAGTCTGGTCTATTTGTATACGTAACACGCAAAGATTCTTGTCGACGCCATTTTGCTATTTTAGCATGGTCTCCTGAAAGTAGTACATCAGGTATGCTAAGACCTCTATACTCACGTGGTTTTGTATATTGTGGATATTCTAGAAGCCCATTATAAAAAGAATCTGTTGGCGCAGACTCTCCAGAACCTAATACGCCTGGAAGCATTCTTGATACAGCATCAATTACCACCATAGCAGGAAGTTCTCCACCTGTTAATACATAATCGCCAATAGAAATTACTTCATCAGCTAAATTTTGTACCACACGATTATCAAAGCCTTCATAATGACCACAGATAAATATTAACTGATCAAAATTAGCAAGTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAACTTTAACAAGTGTTGTATTTGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.10,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //