Array 1 3414-2601 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZDR01000104.1 Moraxella lacunata strain CCUG 65142 contig_8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3413 28 100.0 33 ............................ CGAACGGGTGCTGACCAAGCTCACCCAAACGCT 3352 28 100.0 33 ............................ TACGCTATTCAAAAACCCCCAAAACTCACTCAA 3291 28 100.0 33 ............................ TAGATGCAGAGATTGGTGCATTACTAGGCTAAC 3230 28 100.0 33 ............................ GATTGGTATTTTAATGCCCAAAAAGCCCCTGCA 3169 28 100.0 33 ............................ GCTAATCTCAATCGCTCTTTTGACAACTTTGAC 3108 28 100.0 32 ............................ AATCATACCCCTGCTAACCCTTGCTATATAAG 3048 28 96.4 32 C........................... CGATGACCTAGCAGATTATTTGCGAGATGATA 2988 28 100.0 32 ............................ TTTGTACTGATGTTTACCGTAGCCTTTATGCT 2928 28 100.0 32 ............................ TTACTGATAGCAAATTGGTGTTTGGTAGTACC 2868 28 100.0 33 ............................ AGTATCAAGAATTGGATAGGGGCAAGGCAAGGG 2807 28 100.0 32 ............................ TTGTAAACTCTTAAATGAGAACAACACCCATT 2747 28 100.0 32 ............................ GTAAAATCCAACTCAAAACACAGTGCCATCAA 2687 28 100.0 32 ............................ AACGGATATTGTGCGTTTTAATCGCATAGAGG 2627 27 89.3 0 ..........A..C..........-... | ========== ====== ====== ====== ============================ ================================= ================== 14 28 99.0 33 GTTCCTTATCGCATAGATAACTTAGAAA # Left flank : CGATAGCGGACGTGGGCGAGCGTGCGACAGGCTATGTGGTGGTAGAACGCCAACAGCGAGCGGGTTTGCAAAAACAAGCCGAGCGATTTGCCGAGTTTAAAAATCTGACGGTGGAGCAGGCGTTGGAGCATTGTTTGGCGTACAAAAAACAGCCAAAGGCGTATCCGTTTATTGAGCTATTCAGCCAAACTAATCAAGTGCCGTATCGGCTGTATGTCAAACAAACAGTCGTGGATAAGGCGGTGGACGGCGAGTTTACGGTCTATGGTATGCACAATCAAGGCGGAGCGATGACGGATAAGGCAACTGTTCCACATTGGTGATTGAGTTTGGTTGTGCTAAAATAAGGGGTATGATACAGGTTTATGCCCTTTATTTTTTGACTATTTAAAAACTTGATAAAAATCAACTACTTATAACAAGGCTAAAAAACATTGGGTAAATGCCCAAAATATGGCTTTAAGTCTTGATATAAGTGGGTTTTATGTTGTATAATTCTA # Right flank : TTGTATTGAACCGTATCGCAATACAACTCAATACAATCCACGCCGCACAGATAGCTTACAAAGCAAAAAAATGCTATAATAACCCACATTTTTCAAAGAATTAGGCGTATGCCAAAGGATTTTTATGAGCGAGCAACTTCCTACCAACGACTACAATGCCAGTAGCGTGCGAGTTTTGCGTGGACTAGAAGCGGTACGAGTCCGCCCTGGTATGTACATTGGCGACACCGATGACGGTTCGGGCTTGCACCACATGGTGTTTGAGGTGGTGGATAACGCCATTGACGAGGCACTCGCTGGGCATTGCGATGAAGTGCTGGTTACCATTCATGCCGATGAGTCGGTGTCGGTGTCGGACAACGGACGAGGCATTCCTGTGGATATTCACCCCGAGGAGGGCGTGTCGGCAGCCGAGGTTATCATGACGGTCTTGCACGCAGGGGGCAAGTTTGACGACAACAACTACAAAGTCTCAGGCGGTCTGCATGGCGTGGGCGTGT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCTTATCGCATAGATAACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.50,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 11841-12388 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZDR01000091.1 Moraxella lacunata strain CCUG 65142 contig_68, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 11841 37 100.0 27 ..................................... TTTGGCAAGCCCCCATTATTATGTAGA 11905 37 100.0 25 ..................................... AGTACTTTTAAGGTCTTAGGCGACT 11967 37 100.0 27 ..................................... CCTGTAAAATCAATGGAGAAAACCCAT 12031 37 100.0 27 ..................................... TGGCAAAATCAATAACCCTAGCTTTTA 12095 37 100.0 28 ..................................... GATATGACAGGAGAAAGATATGAGTCAA 12160 37 97.3 29 ....................................G CAATAATGTTTATGCGTGTGAAGTGATTG 12226 37 100.0 26 ..................................... CTATCATTATAGTCGTGGTTTTTGAA 12289 37 97.3 26 ....................................C AGCAGTGGTTAGAGAAATGGCAGGAC 12352 37 89.2 0 .................................TTGG | ========== ====== ====== ====== ===================================== ============================= ================== 9 37 98.2 27 GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGATA # Left flank : TGGTTTTGATGTTGCCAAATTTTGACATACAAGCAAATGGAGAAGATGTATGATAATCGTCAGTTATGACATCAGTGATAATAAAGTGCGTGGACGATTTGCCAAATTTTTAATGCAATATGGCGACAGGTTGCAATATTCGGTCTATGAAATTCAAAACAGCGAACGCATTTTAAACATCATCACCGAAAAAATAAAAGCAGAATTTGAGTCTTTATTTACAGGAGCGGATAGCGTCATTATCTTTCGGTTTACAGAACGTGAAGTATTAAGATTTGGTCATGCCAAACATCGTAATGAGGATTTGTTAATTTTATAAAAATCCTTGGCAAAAATGATGAGGTTTGTTATAATAAGAGATCTAAATCACACCCAAATGTTTACTTTACAAACCTAAGTCTTAATGTGTGATTTATCATGTTTTGGCGGTAAAAATGATGATTTTTTGTACAAAAAACTTGCTAATTTCTCAAAAAATCATTAAAAATACCCCAAAACGG # Right flank : GCGTTTAAGATGATTAACCCCACTGCCTGTCCCGAAACGCTACTGCCGTGTCTTTGGCTTTTTTGATGGCAAGTTTGCGGTTATGACTGGCGAAGAGCTTTAACTGCCACAGTTTTTCTTGGTATAAGGTCAGATGGTCGCTTGGGTGCATGCGATTGATAAGGCGTTTGCTCGCCAGTACCGCATCAGGTGAGCGAGTGGCAATCTCATCGGCTAGGGCTTTGGCACGTGTCATCGGTTCATCATCGAGATGGGTGATGAGTCCGTAGTCGTAAGCGGTCTGGGCATCAAGTAGGCGAGCGGACATGGCAAGCTCTTTTAGCTTATCCTTGCCGATGTCTTTGGCAAGACGGGTCAATCCCATGTCAGCGACCAATCCCCATTTGGCTTCAAGTACTGACCATGTCGCTGATGGGTGGCTGATACGTACATCCGCCCCCATGGCAAGCTGTAACCCCGCCCCAAGGCATACGCCATCGACCACGGCAATCACTGGTACA # Questionable array : NO Score: 3.02 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.14, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //