Array 1 75-219 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNHY01000043.1 Streptococcus pneumoniae strain pnumococcus23A NODE_43_length_13871_cov_373.779469, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= =================================== ================== 75 25 100.0 35 ......................... ACTTTAGCCCAACCTGTTGCCATAGCGCCGTTAGC 135 25 96.0 35 .........A............... TATTGGAGCCAACCTGTAGCCATAGCGCCATTGCT 195 25 96.0 0 ...G..................... | ========== ====== ====== ====== ========================= =================================== ================== 3 25 97.3 36 GTTTAGGTAGTACCATGAACCGTTG # Left flank : ATAGCACCTGATGCTTCAAGATAGTACCAGGTATCTCCATCTTTCACCCAACCTGTTGCCATTGAACCGTTAGCG # Right flank : GTTTTGTAGCCAACCTGTAGCCATTGAACCATCAGTATTGTAGAAGTACCACATACCGTTTTCTTGTTTCCAGCCCGTTTTTGGTGCGGGAGCTGGTTGCTCTGGTTTTGGTGCTGGAGCTGGAGCTGGTTTTTCTGCTTTTGGCGGTTGCTGTTGAGTCAAGCGGTTATATTCTTCTTCTGATCTACGAGCATAGTCTTCTTCAGCTTGTTGATCTGCTGACTTCTCTGGTTTTGGTGCAGGAGCTGGTTGCTCTGGTTTTGGTGCAGGAGCTGGAGCTGGTTTTTCTGGTTGAGGAGCTGGCGCTGGAGTCTCTTCTTCATCTCCATCAGGGCCTAACTCATTAAGAGCTGCATCTAATTCTTTTTGAGTTTTTTCCAATTCAGCTTTTTTAGTCGCGATAGCTTCTTCTAAACCTTCTTTAATGTAGTCTTCAACGTTGTTTGTTTCAGCATCTTTAAGATTATCTTCAAGTTTTGAAAGTTCTTCTTCTAATTCAG # Questionable array : NO Score: 2.53 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAGGTAGTACCATGAACCGTTG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.00,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //