Array 1 2783322-2781503 **** Predicted by CRISPRDetect 2.4 *** >NZ_QWIU01000002.1 Chryseobacterium nematophagum strain JUb129 contig000002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 2783321 47 100.0 30 ............................................... TATCCCTTTACCATATAAAAAAAATCCTCA 2783244 47 100.0 30 ............................................... TTATCGTCGGCCTTGGCTTTACCCGCCGAG 2783167 47 100.0 30 ............................................... AATGAAACTCACGAAATGTTAAAGTCTATA 2783090 47 100.0 30 ............................................... ATAGTCTTAGCTGGCCCTAGTGTAAATCTA 2783013 47 100.0 30 ............................................... TTATCTAGCCATGTTACCTCAGCACCTTTT 2782936 47 100.0 30 ............................................... TAGCAGTTGTAGTAGTAGCGCCAGCAACTA 2782859 47 100.0 30 ............................................... TATGAATGCTCTTGAGTATTGCATGTGGGG 2782782 47 100.0 30 ............................................... TCGTCTAAGCCCGTGAACCTCATCATATTA 2782705 47 100.0 30 ............................................... GGAGCAAGATTCGTAATTATGCTATCGGTC 2782628 47 100.0 30 ............................................... TTGTTGTGGGTTATAATAATTATTCTTACA 2782551 47 100.0 30 ............................................... AAGTACGAGTACTAAGTCGTACTTAACTCC 2782474 47 100.0 30 ............................................... CTTTCCTTTCTTGTCAACTCTGTAGCATCA 2782397 47 100.0 30 ............................................... GGGGCGGATGGATACACAACTGATTATTAT 2782320 47 100.0 30 ............................................... TATCTTGACGTTTGATCCATTCAATAGATT 2782243 47 100.0 30 ............................................... CTGATATAAATTCAGATTGGTTTTGAAATA 2782166 47 100.0 30 ............................................... TATACCCCTTGTTTCAATAGTAGCCTCCCC 2782089 47 100.0 30 ............................................... ACGCAAGCTGTTGGATTTGAGAATCCGTAA 2782012 47 100.0 30 ............................................... TAAATCCTTTGTTAATAAGTAACAAAGAGC 2781935 47 100.0 30 ............................................... AGTTTATATGTATTTGATTTTATTGATTCA 2781858 47 100.0 31 ............................................... TAGCAGACTGGAATCCTAAGCAGTCTCACTG 2781780 47 100.0 30 ............................................... CCAACTCCTGTTGTACTTGTAACACTGTCG 2781703 47 100.0 30 ............................................... GCACTAATTGAGTTTAGCAGCCTGCCATTG 2781626 47 100.0 30 ............................................... TGTACCTGGATTATTAGTATCACTAATAAA 2781549 47 78.7 0 ..................................TTATT..TTGTG. | ========== ====== ====== ====== =============================================== =============================== ================== 24 47 99.1 30 GTTGAGACTCATCACTAAGATAATAAATTTTGAAAGGAATTCACAAC # Left flank : GATGGTCAAACAAGACCCTTGTTGGTAGCGGTAAAAACAACGGCTACTTCGCTTTATAAATGTTATACAGGAGAAAAACGATTGATATCTTATCCTGAATTGATATGAATACCGAAAGGTTTAATGCCTACCGAATTATGTGGGTTTTAGTATTGTATGATTTGCCAACTGAAACCAAAGCGAATATGAAAGATGCTAACCGCTTTCGTAAAGGTTTAATTGATGATGGTTTTACATTGTTTCAATTTTCAATGTATGTTCGCCATTGCCCAAGCAGGGAAAACGCAGAAGTTCATATTAAAAGGGTCAAATTTATGTTACCAAAAGCAGGGAAAGTAGCTATTATGTGTATTACAGATAAGCAGTTTGGAAATATTGAAATCTTTTTTGCTAGAAATAAAGAAGAACCTCCTCCGACATTTCAACAACTCGAATTGTTTTAAATTTTAAATTCCAATAAATGAAATAATCTACTGTAAATCAGTAGATTATTTTTGGAG # Right flank : AGTGGGGCTTTAAGATGTTTATTTTCTGGGTGTTTATTTATAAAAAAATTCTTTAGAAACTGAGAAAAACGTATTTCAATCATATAATAAGTAATGACTGAAATACCAATTGTCAATATTATACAGAAAAATTTATAGACAAATAGGGGCAAAAACTGAAGCAAATAAGTCTTATGAGAATCTAAAATAAGAAGGGGTATAATATGAATAAGATAAATTGAATAGGAAATTTTCCCGAGAAAAAGGGTCCATTTTGAAGATAATATTTTTGAGATAAAAATTTGTGGCTGCTGAATGATCGAAGAAAGTGTAAATGAGAAAAATATAAGAATAATAACATCCATCTTTTTCAATAGTAATGAAATAAGTATAATAAAAAGCCCCCATGAAATATTAATGATCCTTCCTGACTTATAAAAATGGAAGCTTAAGATCCCTAAGAGATATCCGGCAAAACATCTTACAACTGCAGAAAGTCCATAGGGTGTATTGATAAGCCC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAGACTCATCACTAAGATAATAAATTTTGAAAGGAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.10,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //