Array 1 505495-506377 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDJJ01000001.1 Proteus mirabilis strain SC93 NODE_1_length_1180142_cov_125.432, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 505495 29 100.0 32 ............................. GCGTTAACGTCTGCTACTGAAGCCGATGAAAT 505556 29 100.0 32 ............................. AAATAGAACGTATCGCAGCTGTTATTTCTGTT 505617 29 100.0 32 ............................. TTGATTACGTTTCTCTCAGCAAAACAGAAAAA 505678 29 100.0 32 ............................. CGTTAATGACTTTAGATGTTTATAACCGTTTA 505739 29 100.0 32 ............................. TTTTACAATGTTTTATTAAATGGTGTTCGACT 505800 29 100.0 32 ............................. GTGTAAACCGCATCTTGTTCAGGGATTTCTTT 505861 29 100.0 32 ............................. AATGCGCAGACGACCTTTTAAGGCTTGGTTAT 505922 29 100.0 32 ............................. GGGAACCGTTCCGCTTTGCCATCTTATTTGCA 505983 29 100.0 32 ............................. TATCGAATATTCACAGGTTGCATTGATTGCAG 506044 29 100.0 32 ............................. TATCGAATATTCACAGGTTGCATTGATTGCAG 506105 29 100.0 32 ............................. GTGAAATGATTGTTCGCAATGATATCCGAGGC 506166 29 100.0 32 ............................. CATCTTCAAAGACTTTCTGACTGTATGGCTGA 506227 29 100.0 32 ............................. CGAACGTGATGACCAAACACATGTACACACCA 506288 29 100.0 32 ............................. AATGGGCTGAGGACGAGGCAATGAACAATGAG 506349 29 96.6 0 ..........................T.. | ========== ====== ====== ====== ============================= ================================ ================== 15 29 99.8 32 GTGTTCCCCGTATGCACGGGGATGAACCG # Left flank : TCCCAATGCAAAACCTGCGCTTGATTGTCCCGTGGTATTTCCTTATGCACCTAATGCCGTTTTAGTCGGTTTTCTGAGTAGTTTTGCAGCGGGTGTCATTGGCATGTTTATTCTTTATGCTTTAGATTGGACTGTGATTATACCCGGGGTGGTACCTCATTTCTTTGTGGGTGCAACTGCAGGCGTATTTGGTAACGCCACAGGGGGACGCCGAGGTGCTATTTTAGGTGCTTTTGCTCAAGGTTTATTGATTACTTTCTTACCCGTATTTTTATTACCTGTACTTGGTGATATTGGTATTGCCAATACCACATTTAGTGATGCAGACTTCGGTGTGATTGGTATTCTATTAGGGATTATTGTTCGTTAATACTACCGACGTTGATATTACTTATTAGTGGAATTTTAATAAATGCCCGACTTTTTAACCCGTCGGGCATTTTTTTGGTAGAAATAGTGTATTTAAATTTTCTTTATAGATTCAATCTATTATGATTAGA # Right flank : GATCATCTTGTGCATTTTTATTATGTACTGTTTTCTAAATATTCTAAGAGTTATGTTGTGATATTAAGTGGGCAATAAATTTTGAAAAGCCACTATAGTCAATTCATATATGTTGTAAAATAGCAACATATATGAAGTTTTGATAAAGTTTAATAAGAAGTAGATCTCTTTTTAAACATTATTTAGAGAAAAAAATAGCTATTAATTGTAATATCTTCCTGTGGTAAGAGAACGAGTTAAGCGAAATGGATAAAGATTATTATAGCTACTGGGGCAAGTTTAAATCAGAAAATAATCATGAATACTATCATTTGCTTCCATATCATAGTTTGGACGTGGCTGCTGTAGGTATGATATTGTTTCCAGAAAACTCAAAAATTATAAAAGATATTTCTACTTTTTTACAAATACACCCAAAAGAATTTTCTAAACTGTTTTTATTATTGCTTTCTCTTCACGATGTTGGCAAATTTTCTTCTTCATTTCAATATATTAATCCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTATGCACGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTATGCACGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.30,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //