Array 1 36961-38012 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTIW01000020.1 Malaciobacter marinus strain MARC-MIP3H16 Ga0139035_120, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================================================== ================== 36961 30 100.0 34 .............................. CACCAAACCGTTAAGCCAACTTTTTTAAACATAT 37025 30 100.0 39 .............................. AGAATGATATCTTATACATAAGGAAAGAAGCTTACAAAG 37094 30 100.0 36 .............................. TAATTAGATTTATAATATATAGTTTTAGTCATTCTT 37160 30 100.0 36 .............................. AAAGCTAATGTTAAACCATTTGTGTTTGGTAACAAC 37226 30 100.0 43 .............................. AAAGATATTATTTCGTAGCCCTCTTTTTTATAAAATTCTTTAT 37299 30 100.0 35 .............................. GTGTTAGCTATCTCTTTTAGCTTTTTTGTAGCTTT 37364 30 100.0 34 .............................. TTTGCAGAACCAATTATTTGATTGATAATATTGG 37428 30 100.0 37 .............................. TACGACCTCTGATCGTAAAATCAACTATATAGCAACC 37495 30 100.0 33 .............................. CTAAAGCTAATACAGTTTTTAAGAAAGATTTTG 37558 30 100.0 38 .............................. TTGATAGCGTTTGACCTATTGCTTGTTGAAATATTTCA 37626 30 100.0 34 .............................. CCTTTAAGACTTTGTGGACCAATATCACCCTTTT 37690 30 83.3 21 ...............T..A.....C...TA AATTCGCATTTCCGAAAGAGA GG,A [37707,37716] Deletion [37741] 37744 30 86.7 37 AGG.........G................. GATGGCTTTGCAAGAGTTATACATATCTTTGTTTGTA 37811 30 100.0 34 .............................. ATTTGAAAATAATTTATCCCGTTGACGGGATAAA 37875 30 83.3 75 ...............T..A.....C...TA AATTCGTATTTCCGAAAGAGAGTAGAGCTCCAACATTTGGTAGGGATACGAATAAATTCGTATTTTTGAAAGATG GG,A [37892,37901] 37983 30 80.0 0 A.....T.....T............T..TT | ========== ====== ====== ====== ============================== =========================================================================== ================== 16 30 95.8 38 GTAGAACTCCAACATATAGGAGATTGAAAC # Left flank : AAAATCTATCATTTCAAAAACTTTACATACTTTGGATTATAAGTACACTACAAATGAAGAAAACTGGAAAGGTAAAATGGTAATTTTATATTTGCCTGATGTTGAAACAAATAGTGAGAATCAAGAAAAAAGACATGAAGTTTTCAAAGAAAAACTTAAAATTTTAAAAACTTTAGATAGAGATGAACATATCTTACTTATATATGTACCGTATCCAACTTTTAAAATTAGTGAATATAAAGATGAGTTACCAAAAAAATATACTTTTGTTAATAGTCAATTTACTTTAATAGAAAGACTTTATAGTGCATATATAATTTCAAATATTAAGGAATAACATTTTCCAACCTTTTTAACTAAAGATTAGATACAATACCTATGAAATAGTAGTTCTTTTAAAATTTATTGTTTTTTATAAAATGATTGGAAAAAATCTTTGAAAGTACTGTATTTTGGTATTTTATAAGATATTTCTATTTTAGAAGTGCCTATTTTTCTTA # Right flank : TTTATAAATAACAATATTTTTTAAGAGTTTTGAAACCAAGTGGCTTATATACTTTAGTTATAAAAGTAGGGAGAGTACTATGAATAAAAAAAGAGTTTTGATAACTGGTGGAAATAAAGGTATTGGTTTAGCTGTTTCAAGAGCTATGTTAGAGCTAGGACATGAGGTTATTATGCTTGCAAGGGAGTTTGAAACTTGTCCTTTAGTTGGTGTAAAAGATGTAACTGCTGTTGAGTTTGATCTATCAAAGCTTGAAGATTTACCAGCACTTGCAAAAGAGATTGGGGATATTGATATTTTAATAAACAATGCAGGTTATATGCAACCTAAATATACATATGACAACTATCCTGTTGAAGCAAGAAATGATATTATGAATGTGGATTTATATGCTCCTATTGAACTTATGAATCTATTTTGTGAGCATATGAAAAAGCAAAAATATGGAAGAATAGTAAATACAGCTTCAATTGCTGGACAAGTAGGGCATCCTGATGTTT # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:0, 3:3, 4:0.79, 5:0, 6:0.25, 7:-0.23, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGAACTCCAACATATAGGAGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.90,-5.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-26] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 29642-27330 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTIW01000003.1 Malaciobacter marinus strain MARC-MIP3H16 Ga0139035_103, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================================================================ ================== 29641 30 100.0 36 .............................. CTTCTCTATAAACATAAATATTGAAAGTGTTTTGTT 29575 30 100.0 35 .............................. TCAATTGTATTTAACTCTCTTTTTAATCTTTCAAC 29510 30 100.0 37 .............................. ATTACAAATATTTTTGTGGAACATTTAAATTTACAAC 29443 30 100.0 35 .............................. AGATACTGAGGATAAGAGAAGAGCTTATAAGTATA 29378 30 100.0 35 .............................. GGTAAAGGGGGAGTAATCAATTTATCTTTATTTTT 29313 30 100.0 34 .............................. ATTCACTCAATAAAAGAACTAATTCACACACTAA 29249 30 100.0 36 .............................. TATCTATGATATGAATTTTCAAATTGTGTAATTTTA 29183 30 100.0 35 .............................. CAAAAGATATTGCAAAACAACAGGAAAAAGAGTTA 29118 30 100.0 35 .............................. TAAAAGCTATGTTAGATATGTAGATGACTTTGTAA 29053 30 100.0 34 .............................. TTTAATATTATTTCTTCATTATCAAAACTATAAA 28989 30 100.0 34 .............................. ATCGTTAAATATGGATTATTACAACCAATAGTAG 28925 30 100.0 35 .............................. TTCAAAATTTCCACCCTAAATTCTTGTATTTCTGT 28860 30 100.0 34 .............................. TCAAAGTCCTTAAAAGGGCAGATGAAAAATTAAT 28796 30 100.0 36 .............................. ATAGATACAAGTGAGGGAGCTGGAAAAGAAAGTTTT 28730 30 100.0 36 .............................. CTTCGAGATTGTATATGATCTAGCAAAAGAGAGTGA 28664 30 100.0 34 .............................. AACAGAAGTTTTGAAAGTAGTTGGAAGAATAGGG 28600 30 100.0 35 .............................. TCAATTGCATTACTACCCTCAAAGTTTAAATCATA 28535 30 100.0 36 .............................. TGAGTGAAACATATGAAAAAAAACTATTAGAAGATG 28469 30 100.0 35 .............................. AGATTATAAATAAATGTTTCCAAGTCTTCTTTTTT 28404 30 100.0 34 .............................. TACCAGTTGTCAAAACACCGTTCTGTGAATATTA 28340 30 100.0 35 .............................. TGGTCTACAAAACTTCCTGTTGTGGTACCTGTTAC 28275 30 100.0 34 .............................. GGACTTAGCGCTTCAATGTTTTAAGCTACATTTA 28211 30 100.0 35 .............................. TTATGAGATTCATTTTTAAAATAACTTAAAAATGA 28146 30 100.0 36 .............................. TTTGAAAATAGTCTAAATTTGATTTGGTAACTTTAT 28080 30 100.0 36 .............................. CTAGGTGTTGTTATAGAAGATGAAGTTTCTCCACCG 28014 30 100.0 37 .............................. TTCCATTTACTTTTTAACATAACCTGTAATGTGTCAA 27947 30 100.0 38 .............................. TCATTTCTATTTGAAAAATTTAACAAAATTGCACTAAC 27879 30 96.7 39 ....................T......... TTACAAATTTCATTCTTAATCATTTGTATCTTTTCTTTC 27810 30 100.0 35 .............................. ACATCTCAGGCTAATCAAAAAACAAACAGTTCTTT 27745 30 100.0 35 .............................. ATATTAGGTGATTGTTATATGGAAGTTTTGGAATA 27680 30 96.7 34 ...........G.................. TTGCGATTTGTTTACCAATTATTTGGCTGATACA 27616 30 80.0 35 .....G...C..T....A......A....A TGACCCGAATGAATTCGGGTTTCCGAAAATAGCGC 27551 30 76.7 36 T.....TTG..G...G..G........... AATATTGTAGGATTTGTTACTACACTCTTAGTAAGA 27485 30 80.0 96 .....G...C..T....A......A....A TGACCCGAATGAATTCAGGTTTTTGAAAATGGAGCTTTGAATTGAAGCATGTGGTATGAAATGACCCGAATGAATTCGGGTTTCCGAAAATAGCGC 27359 30 86.7 0 T.................G.....A....A | ========== ====== ====== ====== ============================== ================================================================================================ ================== 35 30 97.6 37 CTTGAACCAAAACATATGATGTATTGAAAT # Left flank : TAAAATTTAAGGACTTTTATGGCTACTAAAAAACAAAATTATAATTATAACTACATATTTTTATTTTATGATATTGCAGATGAGTTTAGTGAAGTAGGTAAGTATAGAGTATCAAGAGTCTTTAAAATATGTAAGCAGTATCTAAAACATCATCAAAAATCAATCTTTAGGGGGAACATAACTCCATCAGATCAAATTATGCTTGAAAACAAACTTAGAAAAGTAATAGATAAGGATTTGGATTTTATCTCTATTATTAAAGTACAAAATTCAGGAAGTTTTACAGAACTTACTATTGGAAATGATAAAAAAGAGTCAGAATCTATTTTTATATGATTTTTCCAAGCTACTTAAAAATAATATCATCTAAAAATAGCTATAATAAGGCACTTTTAAAAAGTTATTTCACAACTTATTGTTTTAAAATAATCAGTTGGAAAAACTTCTTAAAAGAACCAATTAAAGGGAAAGTGTATTTTAGAAGTGCCTAAAACATCTTC # Right flank : TGACCCGAATGAAATTGGGTTTCCGAAAATTGGGTTTTGATTAAATATAAGTTAAGAAAAACTTATAATAGACTCTTTTAAATAGATTAAAAAAACTTTTACTTATAATACGCAAAAATTATGTATTTAAGGTAAATAATGATTAAAAAGATTGATATGAACTCTACTGAATTCCAAACTCAGTTTGAATTGACAAAGCAGTTTACAGACAAGGTTTTAGATAGGTTTGGTTTTGTTTATAATCCTGAAAATGATGTAAATGAATCTGTTCAACAAGGGCTTACTAGAAATAAGATGATATATGAAAAAAGATTTTGTCCTTGTTTTATGGTAGTTGGTCAAACAAAGCAAGAACAAAAAGAAGCAGATAATAGACTTTGTCCATGTAAACCTGCACTTGAAGTTGAGATACCAAGGGATGGAAAGTGCCATTGTGGGATTTTCTGTACTCCTGAATTTGCTAAAAATGAGGCTTTGAAAAATGAAGTTAGTGAGGTTAC # Questionable array : NO Score: 8.99 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:-0.14, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAACCAAAACATATGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [25-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 70486-68995 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTIW01000010.1 Malaciobacter marinus strain MARC-MIP3H16 Ga0139035_110, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 70485 36 100.0 30 .................................... AGTGACTTTAGAGCTTTTTATAACAGAATT 70419 36 100.0 30 .................................... AGGCGAACTTACAGGGAAACATCACTTTAA 70353 36 100.0 30 .................................... AGCTTTAGAGCAGATTTGAATAATCTTCTA 70287 36 100.0 32 .................................... TTGAATTAGTTTCAAATTCTGTTTGCTTATCA 70219 36 100.0 30 .................................... AAACAGATGAAGATATAGAAGTAGAAACTG 70153 36 100.0 30 .................................... GCTAAATAATGTGCAAACTACATCACAAAA 70087 36 100.0 30 .................................... TTTATAAATTAAATAGCGAAGAAAAAACAA 70021 36 100.0 30 .................................... TTTATAAATTAAATAGCGAAGAAAAAACAA 69955 36 100.0 30 .................................... TTTATAAATTAAATAGCGAAGAAAAAACAA 69889 36 100.0 30 .................................... ATGAAGTAGAATTAAGTAAATTATGGAAAT 69823 36 100.0 30 .................................... GCATTATCTCTTGATATAAGTATTGGTGTG 69757 36 100.0 31 .................................... AACCCCTTTTAAAAGGTAAAAAATGGCTTTC 69690 36 97.2 30 ...................A................ GATGAAACGGGAGTAAAACTTCCTAGTTCT 69624 36 100.0 30 .................................... CAGCGAGTTTCCAAAATTCATTCGCAGTAA 69558 36 100.0 30 .................................... TTAATCATCTTGATTGTTCTTTTGAATGGG 69492 36 100.0 30 .................................... AAAGTTACAAGTTGGAAAACAAACAGAGAT 69426 36 100.0 30 .................................... AAAGTAACTGGAGAGGAAATACAAGTGGTT 69360 36 100.0 30 .................................... ATTGGTGGCGATTTAGAGATAATGGCTAAA 69294 36 100.0 30 .................................... CCATAATAAAGCATTCCATCATCAGCATTT 69228 36 100.0 30 .................................... GATAAAACATAGCCCTCATTTGCAACTTTT 69162 36 100.0 30 .................................... TAAACCTATACTTGAAGAAAACAATCATAT 69096 36 100.0 30 .................................... GTAAGAGTATAATGGGCTTTGCAACATACG 69030 36 94.4 0 .................................T.T | ========== ====== ====== ====== ==================================== ================================ ================== 23 36 99.6 30 ATTATAGCATATTTGTGTGGGAACAGGCGCTATAAC # Left flank : GTTGAACAAAGATTTATGAGACTTTTTGTATTTTTTGATTTACCTACAAACACAAAAAAACAAAGACAACATGCTACAAAATTTAGAAATCTACTTATTAAAGAGGCTTTTACTATGCTTCAATATTCTGTTTATGTTAGAGTTTGCAAAGGCCAAGAAATAGTGAATAAATACATTGATATTATAGAAAATAATTTACCTAGTGAAGGGAACATAAGAGTTTTACAAATAACAGATAAGCAATATGAACGAATGAAAATTCTAATTGGTGAAGAAACATCAGAAGAAAAAAGTGTAGGAATGAAACAACTTTTACTTTTTTAATTTTATAATAAAAAACTTATCAAAAAAAGATTATATTCATCATTGTATTTGTTAAAAAAATAGTATATTTTTAACAAAAAAAACTAATAGAACTTATGAAATTATACTTAATTCATATCTTTTTTATTTAAGATAAATTATACCAAGCCCACTATTCCATGGACTTAATAAAAGGT # Right flank : CTAAAGTAAAATAATTTATCCAGTAAAAATTATTAAATAAAGACAAGACTTCTAATTATTAAAAATATATAAACTACATAACTCATTTAAAGGCTCAAATAAAACATCTTTTGCTTCTTGAAACTCAATATCATTTTCAAAACATAGTTCTAAAAGATGGCTTTGAATATTTTTAGTTTTATCTATTTTTCGTAAAAGATAAAATATCACTGGGTTTATTTGTCTATACTTAACCTCATCATCTTTAAAATCATAATAAATAATTGCAAAATTCTCTTCTTTTTTTTCTATATTTGCATTTAAAATATCATAGTTAAATTTCTTAAGTCTTGCACTATTTGAAAGTTTATAAATATTTTCATAATGAAACTCTTTTAACTCTTCTATTTTGTACTCTTGCATAGCTAGTTCAATCTCTATCCAGTCAAAGTATAAAAGTTCATAAAGATATTTTCTATCATGAAATAGTCTATTTTTTTTTACAAACTTTCTATAATCAT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATAGCATATTTGTGTGGGAACAGGCGCTATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.60,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //