Array 1 98676-97429 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTMY01000035.1 Escherichia coli strain N53976 N53976_contig_35, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 98675 29 100.0 32 ............................. GCATTACGGTAAATCGCTGGGGCTGTCCCGTA 98614 29 100.0 32 ............................. CTGGGGCTGCACATTGACAATAAACCGCCGCC 98553 29 100.0 32 ............................. ACTTGATTACCGCTATTTTCTGACGATTTAAT 98492 29 100.0 32 ............................. CCTGATAATTTACGCTATTCAGCGGAGATGAT 98431 29 100.0 32 ............................. CGGCTTGTTTAATTGCGTGGAACGTCTCAATT 98370 29 100.0 32 ............................. ACGGCGTGGATTGAGGGACGGGTATTTGGTCC 98309 29 96.6 32 ............................T AGATCGCGCCACGAGGAAACGAATATGAACGG 98248 29 100.0 32 ............................. CCGCCGATTTCCCTGGCGTCAAAAGCGGTGAG 98187 29 100.0 32 ............................. CTCTTTCTCAGTCATCTGGCGCTCAACGCCGG 98126 29 100.0 32 ............................. GCAGCAATTGCCGGAGTTTTACTAATTGCCTC 98065 29 100.0 32 ............................. TTTTGATTTCATTAACGGCGCTCCCCATATTT 98004 29 100.0 32 ............................. ATACAAACGCGGTGTTTATCAATATGAATTTT 97943 29 100.0 32 ............................. GCAAATTAAGCTGGCTGGCAATCTCTTTCGGG 97882 29 100.0 32 ............................. GCGTCGCTGGAAGAACAAAACCGCCTGATCGA 97821 29 100.0 32 ............................. GCACCACGCGTACCCCGATGTTTGTTTTGCCA 97760 29 100.0 32 ............................. TCGAAGAAGAAAGGGAAATAATGCGAGGAACG 97699 29 100.0 31 ............................. CCAGCCGTTCAGTATTGCCGGTGTCAGCAAA 97639 29 100.0 32 ............................. GAAAAGCTACTTTTGTGTTCAACTGATGCATT 97578 29 100.0 31 ............................. CCGCGCAAATCCAGCGAGCCGCCGACGCTCA 97518 29 100.0 32 ............................. GGTAAAAACACGGTCTGAACCGACATTCATGT 97457 29 93.1 0 ...........AT................ | ========== ====== ====== ====== ============================= ================================ ================== 21 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTATTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTACTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : GGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAACGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //