Array 1 25511-24223 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEKCN010000019.1 Pseudomonas sp. MF7453 MF7453_contig_19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================== ================== 25510 27 100.0 33 ........................... TGTCTTGAATTCGAGTGATGCAGGGGGCTTGGT 25450 27 100.0 33 ........................... TGGTATGGCGTGTCCAGGCATCGAAAGGATTTC 25390 27 100.0 33 ........................... TTTGAGGCCGGGGGACCAGCGGCACTGGTTGAA 25330 27 100.0 33 ........................... TGAGAAAATCCAGGTACGCGAGGCGGGGCTAGA 25270 27 100.0 33 ........................... TAGCACAAGCCCGAGCTGGTCGGCCCCCCATGC 25210 27 100.0 33 ........................... TTGGAAACGCCCCTTTTGCCCTGATTTGCCCCT 25150 27 100.0 34 ........................... TACGCATCAGCGCTGGTAATCAATTCACGTTCAG 25089 27 100.0 33 ........................... TAAATTCCCCGAGTTCGCCCGCAAGTACCTGGA 25029 27 100.0 33 ........................... TGCTGGCGTGGACAAACACTCGGTTCCAGTTGT 24969 27 100.0 32 ........................... TCTACGTCTGCGATTACAAAAACACGGGCGGA 24910 27 100.0 34 ........................... TGATCGGCCGGCCTGGCAATTGACAGCGATATTT 24849 27 100.0 34 ........................... TAGATTGCCCAGCTCGTCGCATCCGCCCTTGTGC 24788 27 100.0 34 ........................... TAGGAAGATGCCACTGCGCTGGCTGCCTTGGGTG 24727 27 100.0 33 ........................... GAGGCTGGCTGCCAAGGGCAAAGCTATCCATTC 24667 27 100.0 33 ........................... GCATAAGCAAGAGAGGTAGTGTGAGCATGTTTT 24607 27 100.0 33 ........................... GTGCGATAGTCAGCGCACTGACGATTGCAAGCA 24547 27 92.6 31 ...........C.............G. CTGCGGAATCGTTGAAGACGGCTGCGAAACT 24489 27 85.2 33 .......A....A.G..C......... GTACGATCTCGGGAATTTGCGTATCTGGGATAC 24429 27 85.2 32 A...........C....C.....A... AACCAGTGGGGCATCGTCATCGGACGGCTTTT T [24404] 24369 27 88.9 33 ..A.........C...........T.. GCATAAGCAGGAAATGGGAGGTGAGCCCTGTTT 24309 27 81.5 31 ..A........C.....C..T.....A TAATCGACCGATCTAGGGGCAGACGGGCTAG GG [24284] 24249 27 85.2 0 .......C.T.......C..T...... | ========== ====== ====== ====== =========================== ================================== ================== 22 27 96.3 33 GTGTGCCGCCGTGTAGGTGGCTTGAAG # Left flank : TCAAAGACGCTTGCGTCATGCCGACAGCTTTTCGCAGTGCCGCGCTCGGCGACGACAGGGCCGAATTTAGGGCCAAGTGCATTGCTGTCTTCGATAAATACCGGGTTTTGGAAACCATGATCGAAACAATTAAGGACGCTTGTGATTGTCATCGCCGTTGATGAGAGCCAAAAGCGTTCGCTGAGGAGATCCAGGCGAGTGTTATCCAAATGGCTCAGCCAAATAGGCTCTCGCACATGGACTGGGAGCCTAAGCCAAGAGGGTATCCAGCAGATGCGCAGCGAGCTTGCAAAGGCAGCGAGTAAAACCAGTGCTGTGGCCGTTTTTGCTGTGCGATCAGGGCGCAGAATGACTCTTTTGTTCTTCTGTGGTGCTCGAACCGATTGGGATGAAAATGGCTGGTTTTCTCATAAATCTATCAGCGCAAAATGCCTCATTGATAGTGACTATTTATTGAAGCAAGTGATTGAAAAATAGAAAGTAATCGCGGATTTATAACA # Right flank : GCGTATGTTTCGAGTAGCCCAATAAGCTCGAGTCAGCGCCGTTTTTTGGGGTTCAACAGTGTTGCGCGATAAGCCTCGCCCTTCAGGGCAGTGAGGATGTCAACGATACAAAGAATTACTGACCAATAAACACCGCCTCAACTGCCGCCAAGGCTTGGCGCGCCCCCTCAAGCTCCGGCTGTATCAGCGTTAAGCCCCCCAGGTCGTTGCTCATCACCGACACGCAATCCTGAAGCGCTTTTTTGGCCTCAGTGAGAGCAGCCAACAGAGTAGAATCTTTGGCCTCCGCAGTAGTCGATGCCCCTTCTACTACGCTGAGGCGTTTGCTGAGAACGAAGTAGATGTGCGGGAAAACCAACTCCTGGACAACGCCTGCATTCTTCGCTGCTTTGGCTGACGCTTCTTCGACGATAGAAATCAGCTCTGCCTTGTGGATCGGGTTGAATAGTTGCATGTGGTGGCTCCCAGTGATGAATGCCCCCAGCATGCCGACCATTCCG # Questionable array : NO Score: 3.07 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTGCCGCCGTGTAGGTGGCTTGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.10,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [25-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //