Array 1 846304-843520 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIWY01000004.1 Actinoplanes teichomyceticus strain DSM 43866 Ga0197565_104, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 846303 30 100.0 31 .............................. ACAGCGCGCAGCTGGGCGTCACGGTGGCCCG 846242 30 96.7 32 .............................T TCACCGTCCCGACCGAGCTGAAGGCCCGGCTG 846180 30 96.7 31 .............................C GGCGCATCGTGCGCCGGCCGACGGGCCCGGC 846119 30 100.0 31 .............................. GCTCGGCGAGGGCCTTGTGTATGGCGTCGAT 846058 30 96.7 31 .............................C TTCTTGACCAGGACGCCGACATGGACTTCGG 845997 30 96.7 31 .............................A AGACGCCGTACGTCTGCAACTCGGGGCCGTG 845936 30 96.7 31 .............................A AGACGCCGTACGTCTGCAACTCGGGGCCGTG 845875 30 96.7 31 .............................A GCGCAGACGCGGCACGGGAGTTCCTGGACAA 845814 30 96.7 31 .............................C GGGACTTCTCGCACCTGGTCGGCGCGGAGCT 845753 30 96.7 31 .............................A GCGACGTGTGGCGTGCCACGTTCTAGATAAG 845692 30 100.0 31 .............................. GCACGCTCGCCGAGCGGATCACGGAGTGGTC 845631 30 96.7 31 .............................C TGAAGGAGAAGCTGGCCGGCTGGAAGTGGTC 845570 30 100.0 31 .............................. ACCGGGGCGTCGCGCGCAACATCGCGGGCAC 845509 30 96.7 31 .............................A GGCTGAGGTCGGCTCCGCACGGTCCGAGGTA 845448 30 96.7 31 .............................A AAAAGCTCGCGCCGAGCCGGGCGGCGGGGAC 845387 30 96.7 31 .............................C CGTTCGAGGCGGCAGCGAAGCGGTACGAGCA 845326 30 96.7 31 .............................C CGGGCGACACCCTCGCTGCGTTCACCCGGTG 845265 30 96.7 31 .............................T GGTGCTGACGGACGCTCTAGTGCGGGCCGGG 845204 30 96.7 31 .............................A GCCAGGCCCGGCCGGGCGGGAGTTGCTGCAG 845143 30 100.0 32 .............................. GCGCCAAGCGGCGGCCGCCGCGGTGGTCGAGA 845081 30 100.0 31 .............................. TTCCGCGGGCCGGTGGAAGCCGTGTTGTCGT 845020 30 96.7 31 .............................T GGGCCTGGACGTACGCCTCCAGGCCCTCATA 844959 30 96.7 31 .............................C ATTGCCTGGGTGCGGATCTCCTGGGACAGCC 844898 30 100.0 31 .............................. ATGACCGATCAGAAAGCCCCCGACGGTCCGA 844837 30 96.7 31 .............................A AGGACGCGATGGGTGAGTTCGAGGCTCACAT 844776 30 100.0 31 .............................. CGTCGGCCAGGTCCCCGACCGTCCGGAACGC 844715 30 96.7 31 .............................A CCACGCAGTACTGGAACCGGTCGGACTACAC 844654 30 96.7 31 .............................T GACGTTCGACCCTTACCCGAACGACACGCCT 844593 30 100.0 31 .............................. GGCGGGCGAACCGGGGGGCGTTGCGGCGCGG 844532 30 100.0 31 .............................. CGTACCGGGCACGCCACGGCCGGGCCCCGAT 844471 30 93.3 31 ............................TC GTGCGACGAGACGCAGCGATGACCAGGACTT 844410 30 96.7 31 .............................C AGGTGGGCTAGCACCGCCGAGATCGCGAAAA 844349 29 93.3 31 ........T............-........ CAATGCCACACGCCAACCCCGGGCCGCGGTC 844289 30 96.7 32 .............................T GCGCCGCCAGCTCCGGGTCGGCCATCGCGGTC 844227 30 96.7 31 .............................C CGAAGACGGCGAACACTCTGTACGCCCAGCT 844166 30 100.0 31 .............................. CCGGCCGAGGGTTGCCTACTGCTCCTCGTCG 844105 30 93.3 31 ....A........................T ACAAGTGGCTCATCATCGGCGGCGTGCTCGG 844044 30 100.0 31 .............................. ACATCCAGAAGGTCATGGGCTGATGAATCTG 843983 30 96.7 31 .............................C GATCAGCGTCCCGAACGGCGCGACTTTTCAG 843922 30 96.7 31 ..........T................... TCGTGCAGCGCAACGCAGCCGGGGAAGCCGC 843861 30 100.0 31 .............................. TCAACGCGGCGGCCGGGTGGTACGGGTCACC 843800 30 96.7 31 .............................T GGCGCAGCAGCGGCGACGGCACGATCTCCAT 843739 30 96.7 38 ............T................. GGCCGGCCGCGGACAGCTAGACATGCCCTGGGCCCCCG G [843717] 843670 30 93.3 31 ............A................T CCGCGCCGGCACCCGGGCCGCCGAGCCAGTC 843609 29 93.3 31 .....................-.......A AGGGGGACGGGACGATGTCCATGTCCTGGTA 843549 30 90.0 0 ..........G...........C......C | ========== ====== ====== ====== ============================== ====================================== ================== 46 30 97.1 31 GTGCTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : ACGAGGTCAACCTCTGGGACGAAAGTGGAGCCGACATACCGGCTGGCTTCAACCACGGGTCCGAGTACGAGGTCGATTTCTGATGACCGTCATCATCTTGACCTCGTGCCCGCCCGGCCTGCGCGGGCACCTGACCCAATGGTTACTCGAGATTTCCGCCGGCGTATACATCGGCCACGTCAATCCACGCATCCGCCGACGACTTTGGCACCGCGTCATCGAACTGTCCGGACCCGGTCGAGCGCTACTGGTCTACCAGCAGCCCGGCGAGCAACGACTGACCTTCGAAACGCACGATCACGACTGGGAGCCGGTCGACTTCGACGGCATCACCCTGATGCGACGTCCGACCCAACGTAGCACCTACAACCCAGCAGCCCCCCAAGGATGGAGCAGCGCTAGTAAACGGCGACGCTTCGCACGCCGATCCCCGAACACCTCCACCACACGGACTGAACAAATTCCGCCAAGTTGACCTATAGAATCCCAGGTCAGGAAGT # Right flank : ATTAATGACGAGCAGGCAGTGACAGTTTCGGGAGGTCATTAGTCGGCTGCCGCTCATCAGCATGATGGAAGGCCCTCACTGGGCAGATCCGTAAACTCGATCATGGATCGGGCAATCCATCTCGACTACGGTCGGTGACTGTGAGTCTGGCGGTGTTCCGCTGATGAGGGAGCAGCGCGGTAGTAAGGAGGCCTTGTCTGGACTGTCTTTCGGCGGTCTTGTGCCTCCGCGCTGCTCCCCACGAGGTGTCTTGCCGAGGTTCTGCGGGGAGCAGGCCTTCCCGGTTCGGCTGGCCGTCGGGCATCGGCCGAGGTGTCGCCGGTGGGGGAGCAGCGGAGGTCTTCCCGGTGAGCGTGTTTGTGCTGCTCAGTATCTGTTCTTGTTGGTTGTGGGGAGCACCGTGGCGATGAATTCCGCGTTTCTGGTGGGGGTCGTGCGGCGCTGCTCCCCAATCCGGGTGATCGGTGGGGAGCAGGTGGGGTGGTTACTGGCAGTGCTAG # Questionable array : NO Score: 5.47 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.36, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 855806-858952 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIWY01000004.1 Actinoplanes teichomyceticus strain DSM 43866 Ga0197565_104, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================= ================== 855806 30 100.0 31 .............................. GGTAGACCCGCAGATGGTCACGATGAACAGA 855867 30 96.7 31 .............................T GATCGAGGATGTTGCGGACGACGTGCAGCGC 855928 30 100.0 31 .............................. CGGTCAGCACCAGCGGCGCCGGCCAGGCGAG 855989 30 96.7 31 .............................A GGGCCAGGCACTCCACCGCCTCCGGTACCCA 856050 30 100.0 31 .............................. CAGCAACGGCACCTACACGCTGGCCACCAAG 856111 30 96.7 31 .............................T GCATCAGCGACACCGTCGGCGGCGTGCTCGG 856172 30 96.7 32 .............................C CCGGCCACGGCGAGCTGTCCATCCGGGCGCTG 856234 30 96.7 32 .............................A GCAGACCGTGGGCGGCCCTGGCTCGGGCGTAC 856296 30 96.7 31 .............................C CGTCCGCCAGGAAGTTGTGCGGATCGTCGGC 856357 30 96.7 31 .............................C ACGCCCTTGGGCGCCGGATCAGCTACAAGTA 856418 30 96.7 31 .............................A GTGGCTTACGGTGGTCCCGGCCTACGGTTGT 856479 30 100.0 31 .............................. CGGCAGCCAGTACGCCGATGAACGACATGAT 856540 30 96.7 31 .............................T GGCTCAGCAGGATGAACGGCTCGCAGCCAGA 856601 30 96.7 31 .............................T GTTTGGGATCGTTGATCCGGATCTTCATGCG 856662 30 100.0 31 .............................. AGCGGATCCTGTCCCCTAGAACACGGCAGTG 856723 30 96.7 32 .............................A GGCTCGCCGCGGTGTGCTCCCGCGGCTGTGGG 856785 30 100.0 31 .............................. GAGCGCTGATCGCGGTAGCAACGGAGGCGTA 856846 30 96.7 31 .............................A CCACGCTCAAGGACGTGCCCGGCGCGAACAT 856907 30 100.0 31 .............................. ACGCGCCGAGCATCGCGGTCGGGATGATGCG 856968 30 96.7 31 .............................T GAGAAACGGACGGGGCCGGCACGCCCATGCC 857029 30 96.7 31 .............................C TGCCCTGTTCGCCGGGGTTGATGTTGAACCT 857090 30 100.0 31 .............................. ACGATGCGGACGCTGGCGAGTGGGAGGACGA 857151 30 100.0 31 .............................. GCTGGTCGCGGACATGCAGCGCGATGCGGAG 857212 30 96.7 31 .............................C GCATCCCTCACCTCGGAGGTGTACTAGTGGG 857273 30 96.7 31 .............................C GGCCGGCGACGGCCCGCTCGTCGCGGGTTTC 857334 30 100.0 31 .............................. TCCCGCGGGCAAGACGCCAGATGCCGGACGC 857395 30 96.7 31 .............................A ACCGCACGAACCCGAGGGCAAGGAATCCTTC 857456 30 100.0 31 .............................. GGGTCGAGCAGGGTCGCCGGCCAGCGCACGA 857517 30 100.0 31 .............................. TCCGAGCCAGCGCTCCCGCTCGGACCTGCCC 857578 30 100.0 31 .............................. CGTTCGACTGCTCCGGGCTGATGCAGTGGAT 857639 30 96.7 31 .............................T ACCCCGGGGCGTTCACCGGCGCCCTGCACGT 857700 30 96.7 31 .............................T ACGTCGCGGGCGTGGCGGGCTGGTCGATTGA 857761 30 100.0 32 .............................. GACAGCAGCGCCGCGAGCAGAGCGGTGGTGCC 857823 30 100.0 31 .............................. GCACCACCGTCGACCTGTCCGGGATCGGGCT 857884 30 96.7 31 .............................A CGCTGATCCTCGGCATCGTCGGTGCTGCAGG 857945 30 100.0 33 .............................. GGCTTGGGCTGCGCGGGCAACCGAACCCCTGGT 858008 30 86.7 29 .CC.C........................C TGTTCGATAAACCGAACAGTCAGGAGATC 858067 30 100.0 31 .............................. CGGCCTTGTCGGTCACCGGGTTGTGGTAGGT 858128 30 96.7 31 .............................C GGTGGTCGACGGCCTTACGGCCGGAGTGACA 858189 30 96.7 31 .............................T CGACCCGGCGTCAGGCCCGGACGCCCCCCGT 858250 30 96.7 31 .............................A CGAGGTCGCCGGGGCGGGGGTCGGTGATGGG 858311 30 100.0 31 .............................. GGGTCGACTTTGAAGGGTCGATGACCGGCAA 858372 30 100.0 31 .............................. GGTTGGCCGCCGGGCAGTCCGGGCAGTCGTT 858433 30 96.7 32 .............................C GGATGATCCGGAAGATCACCGATCCGCAGGGC 858495 30 100.0 32 .............................. CCATGACGCGCCACCGGTACGACTGCCCGCCG 858557 30 96.7 31 .............................A CCCGTGACACCGCGCGCAGCTCGGCGATCAC 858618 30 96.7 31 .............................A TCAAGCAGGACGCGAAGAAGCGGATCGGCTA 858679 30 93.3 31 .............G...............C CGGGCACCGTCACCGCGGTCGCGGCGCCGGC 858740 30 96.7 31 .............................T GCGGGTCACCGGCGAGACTTTGAAACTCGTC 858801 30 96.7 31 .............................A GCTCGGCATCGTCATGTCGGTGCTGGAGATC 858862 30 93.3 31 ..........A..................C ACTGGTCGCGCACCCTCAACGGCGCCGGTCG 858923 30 93.3 0 .......T.....................C | ========== ====== ====== ====== ============================== ================================= ================== 52 30 97.6 31 GTGCTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : CCGGTGTGGCCTTGCCGATGTCGTGGACACCCGCCAACCATTGAACGAGAACCCGGCCATCCGCAGCACCTAAAGGCATCTCGTCGGCGATTCGCTGACGAACCGCCATGGGCAGCCACTCATCCCACAGCGACCCCGCAACCTCGGCCGCATCGGCAAGATGCCTCCACAACGGAAGCGGCTGCACCTGGTCCCCCGACTTACCCCAGACCGTCCGCGCTGCGGAACTCAATTCGGAAGCGATGTCCACGGCTGCGGATTCAAGCACGGAGGTATGACGGTTCCCCAGACGACCGAGGCGCGCCTTCTACCCGTATAAGCAAATAGTTACTTTCTGTCGGTATCGATACTTCTTCCAGGTGACGTAACATGCGTTGGTCTCAGGGGCAAGCTCGTCGGCGGTAGGAGGGAGGGGAGCCATCACGCCCTATGTCGCCTCTAACGGGAAACGAGTGAATAAAAACAACACTCAGGCACTACATTCCCGCAGGTCAGGAAGT # Right flank : CGGTACACCCGGGCGTGGCTCACGCCTCCGCCGTTTTTGGGCCACGACCGCCCGCCGGCCCCGGTGACCACGCCAGCCCCCGCGTCGACGCGTTCGGCACCACCACCGTCGCCATGTACCGCATCAGCGTCGACGCCGCCCTCGGCGACACCGGCACTGCCCTGCAGCACGCTGCCAGCGTCAACTCTGCTGCTCAATTTTTTTGGTCAGAGGATGGTCCACGCGGTGAGCTCGCGGCTCCCTCGCCGTAGGCCTGCAATACGGCGGTGCACCTCTGCCGCTGCCGGTGTGCCTGGCAAGGACTTGCGTGCATTGGTAGTAATCATCTGCAGCTCACGGAGCTGACACAGGTCCTCGAACTCAGCCCAGTGTCGAGGGTCCCAGCCGTAGGTTTGAACGAAGGCGTCGAATCCGTGATCATTGCCGAATCGGCGGCAGTGCACAGCTACCGTGGCGACATCCCAGACGCGGTCGCCGATGCGGGCGCCGTCCCAGTCCGC # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.52, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //