Array 1 6776-4227 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB822986.1 Thioalkalivibrio sp. HL-Eb18 F813DRAFT_scaffold00027.27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 6775 28 100.0 32 ............................ TTGCGGCTCCGGGAGGTTGCCCGTGTCTAGCA 6715 28 100.0 32 ............................ ACATCCGTCCGGCGTAAGGAGGGATAGGTGCC 6655 28 100.0 32 ............................ AGCAAGTGCAGCGTGAGCTACGCGACTCCCTC 6595 28 100.0 32 ............................ ACTTCGGCCCGTATCGCATTTACGTACCCGGC 6535 28 100.0 32 ............................ TTCTCCGCGTCTTGCAGGCGGTTGTAGATCGG 6475 28 100.0 32 ............................ AGTAGACGCGACAGCCACGCGCGGGCGGTGAT 6415 28 100.0 32 ............................ TGGATGGAGGTACCCGACGGCGCTTTGATTGT 6355 28 100.0 32 ............................ TTGAGCCGTCTGCGCGAGCGGCTGCTGGAGCG 6295 28 100.0 32 ............................ ACCCGCCCCGGTGACTACTGGTACCACATGGT 6235 28 100.0 32 ............................ ACCATCACCGACAGCGACACCCGCGCCATCCC 6175 28 100.0 32 ............................ ACCAGATCCGCCGTCTTCGAACGCCCGGACAC 6115 28 100.0 32 ............................ TTGAGCTCGACGGCCAGGCGGCCGTTGGTGGC 6055 28 100.0 32 ............................ CACGTGAAAGCCGCCGATGCGGCGGGTAGTTT 5995 28 100.0 32 ............................ AACCTGATCGGCACGGTCGAGAATGGCCAGAA 5935 28 100.0 32 ............................ CTTCAGCTCAGCGGCAAGGCCCGACAAGACGA 5875 28 96.4 32 ............C............... TGGGCGCCTCCCCTGTGCTTGCGCCCCCGACC 5815 28 100.0 32 ............................ AATGGTGCAACGCGGCAGAACGACAGCAAGCG 5755 28 100.0 32 ............................ TGCCACTGGTCGGGATCTAAACGCGACGCGAG 5695 28 100.0 32 ............................ ACCGACGCCCACCGCTCCGAAAGCAGCCTGTC 5635 28 100.0 32 ............................ ACCAACGGGAACCCGCTGTTTCATTACGCCTT 5575 28 100.0 32 ............................ TACGGTCGGCGGTTCGGTCCGGACCTGAAGCC 5515 28 100.0 32 ............................ ACCAGATCCGCCGTCTTCGAACGCCCGGACAC 5455 28 100.0 32 ............................ TCATCCAGGCGCACCGCCTGGCCCGCCGTGGC 5395 28 100.0 32 ............................ ACATCACCGGGCTCGACCTGGTGGGCGAGACG 5335 28 100.0 32 ............................ GACCGCGACCGCTACACCGGCGTGATCGCCCA 5275 28 100.0 32 ............................ CGAGGTGCGGGCAGACTGCGACACCGCCGAGG 5215 28 100.0 32 ............................ ACCCAGGGGTCGCGGATGGGCACCGTATCCCC 5155 28 100.0 32 ............................ ACCCTGCGCCGGAGCGACGGCGACCAGCACCG 5095 28 100.0 32 ............................ GATGCGCAGGGCGAAGGTGCCGCGCGGGCCTT 5035 28 100.0 32 ............................ ACCGGAACAGACCCCGCGCGATCGTCCGATCC 4975 28 100.0 32 ............................ CATCGCCCGACGAATCAGACCGAACACGACCA 4915 28 100.0 32 ............................ TCGGGAAAGGTACAGCCGAAAACGTTATCCAG 4855 28 100.0 32 ............................ CGACGGCTCTTTGATTGTCCTCGACGAGTGCC 4795 28 100.0 32 ............................ GAATCCGCCAACGATTTCGGCGTCGGCGAAGC 4735 28 100.0 32 ............................ ATAACTGCTACTGTTTCGAGTGCGTCATTCAT 4675 28 100.0 32 ............................ GGAATCCCCTTCCCTCTCAGCAGCTCCAGAAA 4615 28 100.0 32 ............................ ATGCAGTCGGCCCGCCGGTCGTTCGGTTCAAT 4555 28 100.0 32 ............................ CCTTGTACTGTTACGTTGCGTTAACGCCCTAA 4495 28 100.0 32 ............................ AAAACTATCGCAACCGCCCCAGCGATACAAGC 4435 28 100.0 32 ............................ ATCTCGAAGGCGACCACGGCGACGTTGCCCTG 4375 28 100.0 33 ............................ GTTTTTTTCGGCGATCCGCTCATACCCCAAAAC 4314 28 100.0 32 ............................ TTGAGCTCGACGGCCAGGCGGCCGTTGGTGGC 4254 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 43 28 99.9 32 GTTAGCTGCCGCACAGGCAGCTCAGAAA # Left flank : ACGCCTGAACGAACTCATGCAGGACGAATGGCTTGGCGGCATGCAAAGCCTGGTGGATGCCACCCCGGTACAACCTGTCCCCGACCAGGTCACCTATCGTCCCGTTCGGCGCCGTCAGTACAAGACCAGTGCGGAGCGCCTGCGCCGACGCCGAATGCGCCGGCATGGAGAAAGCTACGAAGAAGCTCGGCAGCATATCCCCGACGCGGTCGAGCGGCGGGTCAACACCCCGTTCCTGAGCGTGCAAAGCTCCAGCACCGGACAACGCTTCAGCCTATTCATCGAACACGGGCCGCCCCAGCAACACGCCTCGCCCGGCCGCTTCAACACTTACGGGCTAAGCCAGGACGCCACCGTTCCGTGGTTTTGACCCTTTTTCCGAGCGCACCCATGTTGCGCCCGGAAATCAGCGAGATACGCCACCCCTCCGAGAAAGGGTGAAAACCAACCACTACCCAATAGCTCTTTAAAAATCAGCGATATAGAATCAACATGCTCTT # Right flank : GCCCAGGCCGCCCTTGGCCCCTACCTGCCGGAGTTAGCTGCCTGTGCGGCAGCTAACTGAGTGATGAATTATTGGGAAGGCCGCCTCGAGCTCGGCCTGTACCGCGCCAGACCCCGGAGCGCTCCCGCACACTAGAGAGCACTCCTGGCCAGGAGCTGGCTCTATCCCACCCAGATGGTCTTGGCGTTCTGGAATTCGCGGATGCCGAGTTCGGAGAGCTCGCGGCCGTAGCCCGAGTCCTTGACCCCGCCGAAGGGCAGGCGCGGGTCGCTCTTGACGATGCCGTTGACGAAGGCGCAGCCGCACTCCAGGCGACGGGCCAGGGCCTCGCCGCGTACCGGATCGCCGGTCCAGACGCTGCCGCCCAGGCCGAAGCGCGAACGGTTGGCGAGGGTGATTGCGTGATCGGCGTTGCGCGCCCGGGTCACCGCGGCGACCGGACCGAAGGTCTCCTCGTCGAAAGCCGGCATGCCCGGCTCGACCGCATCCAGCAGTGTGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGCTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //