Array 1 61937-55871 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033583.1 Streptomyces sp. ADI95-16 plasmid pADI95-16b, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 61936 29 100.0 32 ............................. GCTTTGTCCGCCAGGTTGACGATGACGCGCTT 61875 29 100.0 32 ............................. TCGACGTCGTTGATCCCCGCGTGCAGGAGGAC 61814 29 100.0 32 ............................. GAGCAGGGCCGCATCGAGGGCGACTTCCCCGG 61753 29 100.0 32 ............................. GTCGCCCTGGGCATCGCCGCCGTCGTCGGCGG 61692 29 100.0 32 ............................. CCGGCGAGGACAACGCCCCGCCCGAGCCGGAG 61631 29 100.0 32 ............................. CAGATTGCCCACGTGTTACTCACCCGTTCGCC 61570 29 100.0 32 ............................. GTCCACCATGTCGACGACTACACCCACCCCCT 61509 29 100.0 32 ............................. GTCGCCGCGCTGGAGACCACCGGCCTCACCCC 61448 29 100.0 32 ............................. GACAGGTTGAACGCGATCAGCGGCATGCCGTA 61387 29 100.0 32 ............................. CGGACATGCACGGCCTCGATCGCGTCGAGGAA 61326 29 100.0 32 ............................. CGGAGGAGACATTGGCCGCGCCACGGGAGCCG 61265 29 100.0 32 ............................. GCGAGGGCTTCCATGATGGTGTTCGGGTCGGG 61204 29 100.0 32 ............................. GGTGCGACCGCAGGACCGTGCTCGCCGGGTGG 61143 29 100.0 32 ............................. TCGCCGCGTGGGTGGCGGTGCTGACGATGCCG 61082 29 100.0 32 ............................. CCCAAGCCCTCGCCGCCGCCGGTTCCTTCTAT 61021 29 100.0 32 ............................. TGGACGCGCTTACAGGGCCATCCTCGTTGAAC 60960 29 96.6 32 ............................C CGGGCCTGAGTCACCACGGCGTGGGTCGTGCG 60899 29 100.0 32 ............................. AGGTTCCACGGCTGAGCGGCGAAGGTCAGAAG 60838 29 100.0 32 ............................. ACGACATCGGAGGTCGTGCGGTGACCACACAC 60777 29 100.0 32 ............................. CCTGCAGCTGGGCGTTGACGGCCTCGTAGCGG 60716 29 100.0 32 ............................. ACTCACACCGCCTGGCAGGCCACCCGCCGCTG 60655 29 100.0 32 ............................. TTCGCCAGCCTCCTCCTGACGATCTGGCTGGA 60594 29 100.0 32 ............................. ACCGCCGACGAGTCGGTAACCAGCAGCACGAC 60533 29 100.0 32 ............................. TCGGCGTGCATGTGCCGAGCCAGGGACCGCAG 60472 29 100.0 32 ............................. ACCGGGTTCGTCCCGCCGAGCGTCCAGGTGAC 60411 29 100.0 32 ............................. ATGGAGGCCGATATCATTGAGTCGCAGCAGGA 60350 29 96.6 32 ............................A TCAGCAATGATCCGAATGTCCCCAAGGATGCC 60289 29 100.0 32 ............................. AGCTGGATCTGCCAGACCACGCGGTGCGACTC 60228 29 100.0 32 ............................. ACCTCGTGGTCGGTGATCTTGTGGAGGTCTAT 60167 29 93.1 32 ........T...............A.... TTGGCGACGACGGACGTGTGGCCTTGGCGGGT 60106 29 89.7 32 ...T....................A...A GACCACCCCGCCGGACCGAGCCTCGACGATGT 60045 29 100.0 33 ............................. ATGACCGCGACCGTGGCCACTCCGGAACTCGCA 59983 29 96.6 32 ........T.................... TGCACCGCCTCCAGCGTGGTCCGCTCCGGTGG 59922 29 96.6 32 ........................A.... GCCATCTGCGGCGGCTGCCCAGACCGGCGGAA 59861 29 96.6 32 ........................A.... AAGCGGCGCCGGACGCCGTCGCTGATGAAGAT 59800 29 96.6 31 ........................A.... CCTGAGGTGTGACCGCTCAGGTCATCGCGAA T [59772] 59739 29 96.6 32 ........................A.... CCCACGCGCCCGTGTAGTACGAGTACCCGTTC 59678 29 96.6 32 ........................A.... TCGACTGGCTGCTCGGGGTGCTGCGTCAGCCG 59617 29 100.0 32 ............................. TCGCGGTAGTACAGATAGCTCGCCACTCCGGT 59556 29 100.0 32 ............................. GTGGCCGTGATCATCGCGGCTACGGGGCTGGT 59495 29 100.0 32 ............................. ACGCACATCGCCTACGAGCTCCTCGACGTCAC 59434 29 100.0 32 ............................. GCCGAGGTGATGGTGACGATCCCGGCAATGAT 59373 29 100.0 32 ............................. TACTGGGCGTTCATGGTCGACGACGTCGACAA 59312 29 100.0 32 ............................. GCGATCCCCATCGGCGTACGGTCGTTCGCCTG 59251 29 96.6 32 ........................A.... ACCGTCGAGGTCGACGAGAACAACCAGCCGAT 59190 29 96.6 32 ........................A.... ATCTACGACGCCACCGCGCAGACCCAGGCCAA 59129 29 100.0 32 ............................. TAGTTGATCACGCCGCCGGCGACGGGTGATGC 59068 29 100.0 32 ............................. CTCGACCCCGGCGAGTTCGACCGCGCGTACCT 59007 29 96.6 32 ........................C.... TCGAGGACCAGGCACCGGTAGGGGTGGTCCGG 58946 29 96.6 32 ........................A.... CCGAAGGACAACGTCAACGCGGTGGCCATCCT 58885 29 100.0 32 ............................. ACGTTTTGCTCTGACGCCTGCCGAAAGCGGGC 58824 29 100.0 32 ............................. AGCTGGATCTGCCAGACCACGCGGTGCGACTC 58763 29 100.0 32 ............................. CAGGCCCAGGAGCAGCTCGCGCAGGCCCAGCA 58702 29 100.0 32 ............................. TACCACGGCGGGCCTTTTGACGTTCTGGTCTG 58641 29 100.0 32 ............................. ATGAGGTACCTATGATGGGTCAACGACAGGAC 58580 29 100.0 32 ............................. TTTGGGGGTCCGCGTAGGAAGGGGAGCTGTGA 58519 29 96.6 32 .........................C... GTAGCGGGGGTTCTCGTGCCGGGTGTTGATCG 58458 29 96.6 32 ........................A.... TCCCCTGACCTGGTGGAGACGATCGAGACCGG 58397 29 93.1 32 ........T...............A.... TTGGCGACGACGGACGTGTGGCTTTGGCGGGT 58336 29 89.7 32 ...T....................A...A GACCACCCCGCCGGACCGAGCCTCGACGATGT 58275 29 100.0 32 ............................. TGCACCGCCTCCAGCGTGGTCCGCTCCGGTGG 58214 29 96.6 32 ........................A.... GCCATCTGCGGCGGCTGCCCAGACCGGCGGAA 58153 29 96.6 32 ........................A.... GCCATCTGCGGCGGCTGCCCAGACCGGCGGAA 58092 29 96.6 32 ........................A.... CGCCAGAACGAGGCGAAGGCGCACGGCGCACG 58031 29 96.6 32 ........................A.... AACCGGAACGACGGGCTGCCCGGGCTTCCCGA 57970 29 96.6 32 ........................A.... CGCGGTGTCCAGTTCGGTACGGAGTCGCAGGA 57909 29 100.0 32 ............................. GACGTGGCCGGCCGGGCGGGGGTGTCCACGCA 57848 29 93.1 32 T.......................A.... TAGACCTGCATGGGATCCGGCCAGTCGGAGTC 57787 29 96.6 32 ........................A.... CCCGCGCCGAGGACCGAGGCCGTCTGGCGGCC 57726 29 96.6 32 ........................A.... CCTCGTCGCATTCGTCCGTCAGCCCGCGCCGG 57665 29 96.6 32 ........................A.... CCTCGTCGCATTCGTCCGTCAGCCCGCGCCGG 57604 29 96.6 32 ........................A.... GGAGGCATCACCACCGCCTGCCTCGGCACCCT 57543 29 96.6 32 ........................A.... CGGGCCAGCACGTAGTACGAGCGCGCCGAGCA 57482 29 96.6 32 ........................A.... ACCCGCTACATCAAGCCTACGAACTACGGCGA 57421 29 96.6 32 ........................A.... CCCTCCACCCCTTCCTTGGGCTCAGGTCCCAC 57360 29 100.0 32 ............................. ACCATGAAGCGGCCGCCGTTGGGGACGGTGGC 57299 29 100.0 32 ............................. TCGTGCAACGCCATCTGGCCCACCTTGTGGCA 57238 29 96.6 32 ........................A.... CCTCCGCCAGGGCCTTCGTGACCCTTGCGGAC 57177 29 96.6 32 ........T.................... CGGCACGCCCGAACGAACTGAGGACGGGATGG 57116 29 100.0 32 ............................. CACCTGACCGCGATGCGGAACCTGATGATCGC 57055 28 96.6 32 .....................-....... GCGACATGCTCTGCGTGCAGGAGGTAGACCGC 56995 29 93.1 32 ........................A...T CTGCCAGGGGGCGCCTGACCTGGCCGAGGCCC 56934 28 96.6 32 .....................-....... CCGCCGGCGTGAACATCCCGAGGACGTCGCAG 56874 29 96.6 32 ......T...................... ATCCGGGCGCAGCGGGTCAAGGCCGCCGAGCG 56813 29 93.1 32 ...............AT............ TTCTTCGCGATCGGCGTGGACGTCGCGATCGT 56752 29 100.0 32 ............................. GCCAACGATCACAGCCCCGGCCGCGATGAGAG 56691 29 100.0 32 ............................. TACCGACCGGTGGTCATCCGAGACACGATCCT 56630 29 96.6 32 ........................A.... CTGGGCTGCAGTCCGGCCCAGCCGGGCCAGCG 56569 29 96.6 32 ........................A.... ACCGCGGCGGCTTGGTGGCGATCCTGCACGAC 56508 29 93.1 32 ..T.....................A.... TTCCGTACGACCAAGTAACGCAAGGCACTCAC 56447 29 96.6 32 ........................A.... CTAGGCGACGCCCGGTCGCGGGCGTGGTGGCG 56386 29 100.0 32 ............................. ACCTCGGCGACGCGGTCAGGCTCACCGCGCGG C [56376] 56324 29 100.0 32 ............................. CGAACAGGGCGGCGGTATCGGTCATGATGGTG 56263 29 96.6 32 ..........................T.. CGCAGCACCCGGCGCCGCTTCCAGCTCGCCGA 56202 29 96.6 32 ..............T.............. CACCAGGAACGCGGCGGATTCGACCGGCAGCT 56141 29 96.6 32 ........................A.... GACACCGTCACCGCTGCGCTCACCGAGCTGCA 56080 29 96.6 32 ........................A.... GTCGGCCGGCGGGGCCGGTGGCTCTGATGGCA 56019 28 96.6 26 .........................-... CCGGGTGTCGCCTCGACGGTGATCAG CCAA,T [55995,56000] 55960 29 96.6 32 ........................A.... CGCTGCGCCCCGGTGAGTGCGGAGCAGGCTCG 55899 29 86.2 0 ..................A..A...G..C | ========== ====== ====== ====== ============================= ================================= ================== 100 29 97.9 32 GTGCTCCCCGCCGACGCGGGGGTGGACCG # Left flank : GACCCGATCTTCCCCTGATCCCGAACTAGAAAGTCACTCAAGCGAGCCGCTGCACGCTGATCGCAGAACTGAAAGGCCGACACCTTCCCAACGTCGTGGAGCCCCGCACACAGCCCCATCAGCGACCGGGCTCTCGGCAGATCCTCAGACAACCCCCAGCCTGCAGCGATACGGCGGCGTTGGTTCTCCGACAGGTACTCGTCCCACAAGAACTCAGCCGCAGCCGCAGCATCCAACAAGTGCCGCACCAACGGGTACGGCGCCAGCTCCAGATCGAGGCCACGCGCCTTTCCCCATAACGACTGATCCGGCTCGCCCCACGGCCTCCGCATCACAGCGCTCCTTCCTACGCAGGCATCCACGTTACGGAGCACGGCACGCGGCGACACCAACATCGCCTCAACGAACAGCGGTTATGGTTCAGGCATGAACGCCAGCCTCATGCCGCCTCGTCAGGTAAAAGACTTGCAAACGACGTAGAACGCCGCAGGTCACGAAGT # Right flank : GTTTGTGCCACGGGTCATCGCATGATCAAGCCGTCGTCCGGAGCGGCGCAGTCTGAGGCAGCAGAACTGCCGCTCCGGAGCGCTGGGCACGCTCGGCGCGGGCCCGGCGGAGGGCGGCGTCCTCGATGGCCTCGGCTTGGAGGTACCGCTGCACGCGGGCGTCCTCGATCGGCGACGGTGGGACCTGCGGGATGACGTCCAGGTCGGGGAACGCGCGCCGACTGAGCTCCCGCAACTCCCGGGTCTGTCGTTCCACCGCGTCCGCGATGGCCGTGTCCTCCCGCCTGGCTGGTACTGCCTCATGGTGCTCGGCGATCGCGCGGCGGTAGCCGTCCGGTGTCGGCCTCCGTATCGGCTTGGCGGGCTCGGACGGGACTGCCGAGGCGGTGCCATCGGCCGCTGTGGGCACGGCGCCAGGGGGCAGAATCCGCAGGGCGCGCACGATGGTACGGCCGGCCGCGGCGTTGGCGGCCGCCACGACGCGGGCCTGCTCCAGGCGT # Questionable array : NO Score: 5.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.73, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCCGACGCGGGGGTGGACCG # Alternate repeat : GTGCTCCCCGCCGACGCGGGGGTGAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCCGACGCGGGGGTGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [28-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 71538-73213 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033583.1 Streptomyces sp. ADI95-16 plasmid pADI95-16b, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 71538 29 100.0 32 ............................. ACGTACGGTCCAACCTTGGGGTTCGAGGGCAG 71599 29 100.0 32 ............................. TTGTACATGGTGGTGAGCACGTGCGTGCCCGA 71660 29 100.0 32 ............................. GAACTCGGTATGGGACTGACCGAGTGTGCCGC 71721 29 100.0 32 ............................. TTGAGCAGCCGGGCCAGCTCGGCCGCCGACTC 71782 29 100.0 32 ............................. GATCTGCGGCGCGTCGGCGTGACCGGCGAACC 71843 29 100.0 32 ............................. CGTGCGGACTGGTGGCCGGACGTCTACCACTA 71904 29 100.0 32 ............................. CCGGTAGCGGGCACGATTATCTCCGTGGGATT 71965 29 100.0 32 ............................. CCGCTCCGGTGGAGGAGCTTGTCCATGAACTT 72026 29 100.0 32 ............................. ACCGGGGCCCTGCACATGACCGGGTGGGGGCG 72087 29 100.0 32 ............................. GATCTGCGGCGCGTCGGCGTGACCGGCGAACC 72148 29 100.0 32 ............................. CGTGCGGACTGGTGGCCGGACGTCTACCACTA 72209 29 100.0 32 ............................. CCGGTAGCGGGCACGATTATCTCCGTGGGATT 72270 29 100.0 32 ............................. CCGCTCCGGTGGAGGAGCTTGTCCATGAACTT 72331 29 100.0 32 ............................. ACCGGGGCCCTGCACATGACCGGGTGGGGGCG 72392 29 100.0 32 ............................. GAGCTGGTCGCCGGCGACTGCTTCCCGGGGGG 72453 29 100.0 32 ............................. AGCGACGTGGAGCTGATGGCTCTGGTGCGCGA 72514 29 100.0 32 ............................. CTGGTGGGCGTGGTATAGCTCTTGCCGATGGT 72575 29 100.0 32 ............................. CTCTCCATGTCGCCGGTGATCGCCAGGTAGCC 72636 29 100.0 32 ............................. CTCGCCCTGGGTGACCAGTGGGAGGCCTTCCG 72697 29 100.0 32 ............................. GTCATCCAAGGCCTGTCGCCGGGCGGCCGACT 72758 29 100.0 32 ............................. CCCCAGCTGTCCTGACTGAACTTGAGCCAGGC 72819 29 100.0 32 ............................. CCGTAGCGACCTCGCGCCAGGACATGGACCGC 72880 29 100.0 32 ............................. CGCCCCTCGGCTCGAACCCCTAAGCCCGCCGC 72941 29 100.0 32 ............................. CCGCGTGCGGCCTTCGCCGCGACGGTGGCGGA 73002 29 100.0 32 ............................. AGACAGAGGCCGCCGAGCTCGTCGACCTCGTC 73063 29 100.0 32 ............................. CTCTGGTCGGTGGAGGCGGAAGCCGTCGCCGA 73124 29 93.1 32 ........................TT... CAAAAGTGAAGCAAGTGCTTCAGCACTCGTTC 73185 29 89.7 0 .....................A...C..C | ========== ====== ====== ====== ============================= ================================ ================== 28 29 99.4 32 GTGCTCCCCGCCGACGCGGGGGTGAACCG # Left flank : GGATCGTCCGCGACGTACAGGCCCTTCTCCATCCCGACACCACGGACACGGAGCAAGCACGCACGGATCGCCGCAGCGTGGACTTGGTGCACCTATGGGATCCCAAAGCAGGGGTCCTGCCCGCAGGTGTCAACTACGCACGAGAGCAGAGTTGATATGCCCTCCATGGTCGTCATCGCCACCACTGCTGTACCTGTCCACCTCCGCGGTGCCCTCAGCCGCTGGACAACGGAGGTAGTCCCTGGGATCTTCGTCGGCAGCATCTCAGCAAGAGTGCGTGACGAGCTATGGGCACAGGTATCGGCTGTCGTTGGGGATGGACAGGCGGTCCTCGTCCACCCGGCACCCACCGAACAGGGCTACGCCCTGCGAACAGCTGGCACCCGCCGACGCATTCCGACAGACTTCGACGGCCTAACCTTGATCAAGATGACAGGAACAACTCAACCCACGCTCGCAAAGAAAGCGCAAAGCGCATAGATGAGCGCAGGTCAGAAAGA # Right flank : CGCTACGACGTACATCAGTCCCTCCCGTCAGCGAGGAGCTCTGCACCCCTGGTACTTCGCTCGGTAGATGAACCCTTACGCCGACACATGATTACGAAAGCTCTGGCCAGGGCCCTTTCGGAACCGATCCCGTGTCCCCCGCCGCGCCGCTCTATAGCACCCGCTGAGCTTGGGGCGGCGGATGAAGTCGTGGGCTTGATCCGCTTTGACGGACATCGGAGATCAGGGGCTTGGGCCCCGGAAGGATGATGTTCATCATGGAGAGCATGGGCAAGAAGAAGGCGCGTCCTCGGCGCTCGTTCACGCCGGAGTTCAAGGCCGAGATCGTCGAGCTGTGCCGACGCGGTGACCGCTCGGTCGGTCAGGTCGCCAAGGACTTCGACCTGACCGAGACCGCGGTCCGCGACTGGGTCCGCCAGGCCCAGGTCGACGCCGGTGAACGTGACGGTCTGACCAGCGGCGAACGCGAGGAACTGGCGGCTCTGCGGCGGGAGAACCGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCCGACGCGGGGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCCGACGCGGGGGTGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //