Array 1 452119-450547 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABWJZ010000002.1 Bifidobacterium pseudocatenulatum isolate LH_663, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 452118 33 100.0 34 ................................. GCCCTCGTACCCCCATACTGGTAGGATGTTGGTG 452051 33 100.0 36 ................................. ATGTCACGAAACTTGACCGTGAGATGGCATCGCGGC 451982 33 100.0 34 ................................. AACATTTTCCGTGAGGAAATGCGTATGGCATCCA 451915 33 100.0 34 ................................. CGTATTTCGCAATCACAAGGGACGACAACAAATT 451848 33 100.0 34 ................................. ATCATGCGTCTCACGGGCTTCCATGCCCTCGATA 451781 33 100.0 35 ................................. CGAGATAATAGCGAGGGGTATCAGCGTTCGAGGCG 451713 33 100.0 34 ................................. ATTCCGCATGCCGCTATTACGGACACGGCCAACA 451646 33 100.0 35 ................................. CGTCAGAACATTGTTCTTAGTCATCAAATCATTAA 451578 33 100.0 33 ................................. ATACGCAGCGCAAGGCGACTACCAGAACGCCAT 451512 33 100.0 33 ................................. AGTCGCGTGACGGTCAACAATTCCGGCGGATAC 451446 33 100.0 33 ................................. ATACGCAGCGCAAGGCGACTACCAGAACGCCAT 451380 33 100.0 36 ................................. GTTAGTCACCTGCGCTTTTTGCTGGATGAACTTATC 451311 33 100.0 33 ................................. AGTCGCGTGACGGTCAACAATTCCGGCGGATAC 451245 33 100.0 32 ................................. TGAAGGGAGCATGGTGATGACCGTGGCTGCCA 451180 33 100.0 34 ................................. ATACCATCCTCGTTAAGGGTGGCGTGGTCGAACA 451113 33 100.0 35 ................................. CCCGACAAGCGTAGGGGCGTGCACCGTTTTATGGT 451045 33 100.0 33 ................................. ATGCGACTCGCTACGCCGTGCCCACGTCTGGAA 450979 33 100.0 35 ................................. GAAGACGGGCCGTATGCCTCCGACTCCCGCAACAT 450911 33 100.0 34 ................................. ACGATAGCCATGGCGCTGCCCAGGATCATCGTCG 450844 33 100.0 33 ................................. AAGGCCGCGTCCGTGCAGGTGCAGGCAGCTCAG 450778 33 100.0 33 ................................. ACGCAGGTCAGCCCGATCCTCGACCGCATCCCC 450712 33 97.0 33 ....T............................ AGCTGGGAGCAGTGCGTTCGCGCCGTACAAGGG 450646 33 97.0 34 ....T............................ GATACGATTAAGATGATTTTCGAGCGTCGTATCA 450579 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 24 33 99.8 34 GTCGCTCTCCTCATGGAGAGCGTGGATTGAAAT # Left flank : CAATACCGATGAGGACAGCCTGCGCTTTTATAAACTTGGCGCTCGATATGCGGATAGGATTGAGCATTATGGACGTGAACGGAGTTTGCCGGTTAATGATGTGATGATGATATAGCACAGGCAAAATGGCATGGTGCCATAACGATATGGTGTGGGGTATGCTGGGTTGAGCGTTTGAGTGTGCCGTCCGGTATTCAGAGTGTGTTTTCTAGCCAGCAGTATTGTGTTTTCGGCAAGGTGGCCGGTCTTGGAATGGTGTTTGTGCGAAGTGTAAGCGCTCATGATAAGGGACGTCTTTCGCACCTGAAAAACTATCGAAATCCGAATTGTGATTTTCGTGGGGCGTTTTGAAAACTAAATAATGGACATTAAAATGAGACAGAAAGCCAGTTGCTCGTTTTAGACATGTTGTTCGTCGTATCGGCGGTGTTGTTTGATATGCTTAAAGCTAGGCAGCTGGCTTGCGTCTCAAAAAGCGGACAAAAATGTCCAGCTGCACT # Right flank : CGGTGTCTGCATCGTTCCGGCCGCCGCGTGGATGTTGCTTTCCCTGTTTATGTCCAGTGTTCCCCGCACATGCGGGATTCCACATGTGCGGGACTGCTAGCAACGGAAAACCAGGGTTTTTGTCCGCTCGGGGCGACTTCAACGGTAATACGAGCAGGAACTGCGACTGGGTGTTTCGCATGGGGTCGCTTCTGAAAGCTATGTAAAAGAAATAGTGTATGTGAAAACGGTCGGGTGGGTGCGGATGCACGAGAAATTGGCTAACCTGTCGAATTTCTGTTTTACTTTGGTCGTTCATCTCGTGAGTGGTCGTCAAGCTAGACATATTGTGTCTCATGGGATGCAACATGTCATATGGAAATACATATGACTGGCGAATATCGCCAATGGTTCAGCCGGATAAAGGACCGGAACGCGAAAGCCCGAATCAGCGCGAGACTCCGATTGCGCTTCTAGATGGGGCGGCCGGTGGGTGACCTGCATACGGTTGGTGACGGGGC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCTCATGGAGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.30,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [41.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //