Array 1 406670-409810 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHXZR010000002.1 Oceanobacter sp. SM2-42 NODE_2_length_655094_cov_39.667918, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================================================================================================================ ================== 406670 28 100.0 32 ............................ GGTTATTAGCGGCTGATCATGGCGAAGCAATA 406730 28 100.0 32 ............................ GTCACCTGGCCGAAAACCCGCAGCGGCCAGAT 406790 28 100.0 32 ............................ GTGATACTCCCTTGGGCTGCACTGCTCCACAT 406850 28 100.0 32 ............................ TCTGCCCTGGCTGCCTGCCCGCGCCGCTCGGT 406910 28 100.0 32 ............................ GGTTATATGCGGCTGGCGCCGGATATGCGGGC 406970 28 100.0 32 ............................ AAGTCGCGGCGCCTGTAATGGAGAAAGCAACT 407030 28 100.0 32 ............................ ACTCCGCTTTTTTGTCGTCTTGAACCAAGAAA 407090 28 100.0 32 ............................ ATTAGAGTTGGTTTAGTCATTTGTAAACCACT 407150 28 100.0 32 ............................ TGATGATTCCAGAGCATCACGGAAACTGTAAA 407210 28 100.0 32 ............................ ATAATTTATGACAATGCCGTAACCAGAACCGC 407270 28 100.0 32 ............................ GGTAAGCGCGATGGTAATAAATGGATTTTCCG 407330 28 100.0 32 ............................ TTGAAATAATTGCAGTCCACTCGCTGACCGTG 407390 28 100.0 32 ............................ ATTACATTCTCCGATTAATTAAATTAGTTTGA 407450 28 100.0 32 ............................ AAGGCGTTCCGACCCACGACCCAATTGAAAAA 407510 28 100.0 32 ............................ TGTACGAAAAATACGGCACTTATAAAATCAAT 407570 28 100.0 32 ............................ AGATGGGCGAATCTGGCGTTCGCAAGTTCCGC 407630 28 100.0 32 ............................ ACAAAGGTTCATGCAATGATGATTGCTAATAT 407690 28 100.0 32 ............................ TTTGACATATCCAGGGTATCGACATCATCCGA 407750 28 100.0 32 ............................ GGAAGAAAGCAGACTTGGCGTAAAAATTACGA 407810 28 100.0 32 ............................ AAGACCAACAAGGACATTAACCAACTTACCAT 407870 28 100.0 32 ............................ CGCGATGAAGTGCTTGAGCATGCCAAGAAAAA 407930 28 96.4 32 .............T.............. GCAAACCATTGCACCCTGAATTTACCGTATTC 407990 28 100.0 32 ............................ AGCGGGAAGAGATCGTCATAGTCATGGACATT 408050 28 100.0 32 ............................ AGAGAGGGAGTTCCAGCCCGTCTAATTGTTCC 408110 28 100.0 32 ............................ GATGACCCGCCGATTATGAGTCGGCCGCTCTG 408170 28 100.0 32 ............................ TTTGCTTTGGTCATCAAACCGGGCCCAGATGG 408230 28 100.0 32 ............................ TGAGTAGTTGTCCTGCTGCAGCGTCATTCTGG 408290 28 100.0 32 ............................ GGGTTGGATTTCATTAAATGGCGAGGGCCAGT 408350 28 100.0 32 ............................ AGAGCAGGGATGGCCAAACAATCACGGTGTGG 408410 28 100.0 32 ............................ AAGGTAAAACGCCGGTCATATCCCTATGACGT 408470 28 100.0 32 ............................ CGTTTCTTGCGAACGCTTGGCTTCTGCTGTTT 408530 28 100.0 32 ............................ GCTAAAATTCTTCAGGGCCATAACGTGTTCGG 408590 28 100.0 32 ............................ GAAGAAGAAGCAACGCATGAAGCGCTGTCTGC 408650 28 100.0 32 ............................ CACAAACATTACCTGACTTTTCGTCTATCAGC 408710 28 100.0 32 ............................ AACGCCGCCGCTGAAGTGGGTTCGGTGCGAAT 408770 28 100.0 32 ............................ AGAAATTCAGCTTCAGCAGATTCGTGTTTCAG 408830 28 100.0 32 ............................ AGGATCGTCCAGGTCAAGCGGTTATCAGTAAC 408890 28 100.0 32 ............................ TGGCTTTCTGGGGCAACTCCACCATGCGATCC 408950 28 100.0 32 ............................ GCGAGGCTGCCACGGAGAGACCGGTAGATCTC 409010 28 100.0 32 ............................ TCGACGTCTTTGTTGATGCGTTGGGATTTGCT 409070 28 100.0 32 ............................ CATATCAATAACGTGTGCTGGCGTTGTCATAT 409130 28 100.0 32 ............................ AGCCATGGAAACGCTCGGCGTGGATCCTGATT 409190 28 100.0 32 ............................ AATGACGGCCGGTGATCTGGTACACACGTTCA 409250 28 100.0 32 ............................ GATAGGTTTCGTTATCAGGGTCACTAAGAAGC 409310 28 100.0 32 ............................ TCCTTTTTTATTGGTGTTTTATGCTTGATTTA 409370 28 100.0 32 ............................ AAGTTGAAGCGTGATCAGGGATATGCCAATAA 409430 28 100.0 32 ............................ ATGGCAACGGCAGGAATTTGAACGCAACGGAA 409490 28 100.0 32 ............................ CTTGAGCTCCATCGACTGGATGCCCTTGAGGA 409550 28 100.0 32 ............................ AGCTCGTCGTTGGTGGATTCATCAATGCGAAA 409610 28 85.7 144 ........................ATCG TTTTGAACTGTGCCAGCCTGAAGGGGGCTATCAACCAACCAGGATCTCTTTGCAGCATGGATCCCGGATCTCGCAGGCTCGTCCGGGAAGACGTTGTTGTTAGCCTCGCTGGCTCTTGATTGAAACTGCATGGCTGGTAGCGCT 409782 28 85.7 0 ..A.....T.A............G.... | G [409805] ========== ====== ====== ====== ============================ ================================================================================================================================================ ================== 51 28 99.4 34 GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : GGCATTGGACAAGCTGATGTGTAGTGGCTGGATGAAAGGACTGGGTGATTACACCCGCGTCTCTGATATTCAGGCGGTGCCAGCAGGCTGCCAATATCGAACCGTGCGACGAGTGCAGGCCAAAAGCGCCTGGAACAAGCGCAAACGTTCAATCGCCAAAGGCTGGTTAACCGAGGAAGAGGCTGCCGCGAAAATCACCGACAACCAGCAAAAGAGCCTCAAACACTTGCCGTTTATACAGATTAAAAGCCTGTCGAACGGCAACAACATGCGGGTGTATATCGAACACGGTGAATTGCAGAAGGCGTCAGTGGCCGGAACGTTCAGCAGCTACGGTTTGAGCAGCACCACAACCATCCCCTGGTTTTGACCCTTTTTTTTAGCGAAATGCCAAGTCCTTGATTTTAAAGGACTTGGCAGAATCCAGAAAAAACAGGGTAAAAACCTGAAAGTGCAGGGAAGCTCTTTAAAAAACAGGAACCTGGCTTTAAATTGCTACA # Right flank : ACGCAGCGTTTGGTTATCAATCTGATTGTCGGGCTCGGTACTCCTGCCAATCTCAGGATCAAATCCGCGCACATAAATCGGTGATTGGTCATTGGTTTTCAGGCAGCAGGAATCTCAATCCTGAACGTTTAAATATATAGATGGCAGGGGTGTTTTTTGGTGGGCTTGAACGTGAATATTCAATTATCTTGGTCTTATAAAAGTCCAAATTCTCTATATGGATATTCATTCAGACCATCATTATGTGATGGCTTGTAAGATCGGGTTCGACAATAGATCTTTACAATATATGCCTACATATAAATATTGGAATGAAATTCAATGGATATTGATTGAAAGCATCTAACGATTGATAGATTTAATCTGAATTAGGACATAAATGGCCACATTGTTAGTTTTGTGTCATTTTGTATCTCGTGGTTAAATTTTGTTTTTGGTCATTTTTTGCCGTGTTTGATCGTGAAATTGCGCCAAATTATGCGTCGATTTATGGCGGTTTT # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.19, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //