Array 1 125214-126035 **** Predicted by CRISPRDetect 2.4 *** >NZ_BORO01000011.1 Oceanobacillus sp. J11TS1 sequence11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 125214 32 100.0 35 ................................ TTTATCTGCGGAGCGATAACAGGGTCAGATTGACC 125281 32 100.0 34 ................................ TAAAGGAGAACACAAGTACATGAAGGAAGATTTG 125347 32 100.0 33 ................................ ATTACTCTTAGTTCGCCATCCATCCCCATATAT 125412 32 100.0 34 ................................ TGTTTGTCGGTCCATCAGGAAAATATGGAACTGA 125478 32 100.0 33 ................................ TGGGGCATTTGCTTTTTCTTCGATTTTTATTTT 125543 32 100.0 33 ................................ AATCACCTAAAAGTTGTTGGCAGAAATAAGAAT 125608 32 100.0 34 ................................ AGCGAGGATTTATTGTCTGTGTAATCGGCATTGT 125674 32 100.0 34 ................................ CACATAAGAACGATTAATAATAATACCCAAATTC 125740 32 100.0 35 ................................ CAAAATTTAAAACTACCTACAGCATTTGCACCTGA 125807 32 100.0 34 ................................ CGATAGCCATCGAACATACTGACGAGAGCACACA 125873 32 100.0 34 ................................ TGCTTAGGCAGTGCTTCTGACATTGTTGCCGTAT 125939 32 100.0 33 ................................ CAGCAAGAAGCACACTCTTGCGCCAATATTAGC 126004 32 96.9 0 ...........................A.... | ========== ====== ====== ====== ================================ =================================== ================== 13 32 99.8 34 TTCGCATCCTATATGGGTGCGTGGATTGAAAT # Left flank : CACGATCACTTGTTGCTAGTGGATTAATAATCACATTAATAGATACAACACCATCTATCTTATCTTTTAAACTCTCTAATTCTCTTTTGATTTTCTCCGCGTTTTCTTTTTTCTCAGTTTCACTAAAATTTGCACGGTGATTCCATTGTACGATATGTTTAATCATGACCAAGCACTCCCTCTTGATTTTATATAGTTAGAGTGTATCACAGACAGTCCTTCTCTCATAGATAGCGGATTCATTTATATCTGAATTTTGGGATCCTTTGATGTGCTTGTACGGTGTCTATGATAAAATAGTAGTTACTAGAGAAATAAAGATTCATTTCATTAGTGCTAACCTAAAGCGAACACAACTTACTAAGGAAGTTAGCACCTCTTTTATAGCAAGTGTTTGCAAGAATCGAAGTGAAGATATCAAGTGAAATTTTTACTTTGAGATTTGGTTAGCACTTTTTTGTTTTTGAAACTTTGTGGTACTAGGGCGCATTATCTGCGCT # Right flank : TTAGCTGGATCTATCAGTATCCTGTACTTGCTTAAATAAAAAAGAATTTTCAAACCTACATGAATTCTAAGGTAAACGAGATACAGATGGATTGGCAAATAAATGTAACAGGGGCATAATCCATTCTTGTTCAGAGCTTCCTTAAAATCAAAAAGGTCCATATATGGTCAAAAGGATATCGAGATCTAAAAATGTAGGTATTAAAATACCTACTGTTAAGGATGCTTTATAACAGTAGGCTTTTATATTAATCATACCATTCTTTTTTAAGAAGCCTTCTTCCAATCAGAAACATCTACCTCAAGTGGAATATTGTTTGCTCGTGCTTTCTTAGCAGCTTTAAAGAATACTACCAAAAGTACAGCTGTACCAGCAAATCCAACTCCCCATGATATATTCATCGGTAAATTAAAGCCAATCGGCTGTGACATAATATATACAATAACCATTACTAGCATAAACGTTCCGGGAATCAAGGCCACAAAATAATTTTTTCTAGC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCATCCTATATGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched TTCGCATCTTATATGGATGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.90,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 123422-120961 **** Predicted by CRISPRDetect 2.4 *** >NZ_BORO01000010.1 Oceanobacillus sp. J11TS1 sequence10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 123421 32 100.0 34 ................................ CGATACTCTCAAGTTTGTCCTCGATTGCTAGATT 123355 32 100.0 34 ................................ ATTCCATGCATCTTCGTCTAATTCAAAATCATCA 123289 32 100.0 36 ................................ ATAGCTTGTGTTTGCTCGTTAGTCTTTGGCACATAG 123221 32 100.0 33 ................................ CGTATGGCCTTGTGGATGACGATAAACTGCGGG 123156 31 96.9 33 ..................-............. CGGAATTTGAATTATAAAGTAAAAGATAAGGAG 123092 32 100.0 34 ................................ TGACATTGTCAGTAACTCCGATTTTTATAAAAAC 123026 32 100.0 34 ................................ CAGCAAAACCAAATCCCTCAGCAATCTTAATTAA 122960 32 100.0 34 ................................ TCTAACCTTAGCTGAAACTGCTGCAAATAATGGC 122894 32 100.0 34 ................................ ACCAGGAAATGGTGGAGAAAAAGCTTCAAAGCCT 122828 32 100.0 34 ................................ CACATAAAGCGGCTATAGATTCCGGCGACCAAGC 122762 32 100.0 34 ................................ AATTTGTGTTTGTAATTCCGTAAGTTGTGATTCT 122696 32 100.0 34 ................................ GCCAATCTCAATGCGTTTAACAAAGAAGGCATAC 122630 32 100.0 33 ................................ CCCTTTTGTTTCTTCCAAGTCGAACGCCTTTGC 122565 32 100.0 33 ................................ ACAGCTTACTATAGCTTTGGATCCATACGATAA 122500 32 100.0 34 ................................ AATCCAGCGAATTAAATCCAGAGAACGTGGATGA 122434 32 100.0 34 ................................ AAAGATGCATTTACTCAAATTCGAAACATCTTGA 122368 32 100.0 35 ................................ TATGGATGAAACAGAAAGGGAGAAGTTTTTGGAAA 122301 32 100.0 34 ................................ CCCACAAATTTATGAGTAAAGATGAGAAATTAGA 122235 32 100.0 34 ................................ GATAAAATCCCACACATGACGATTGCCGGAATGA 122169 32 100.0 33 ................................ GTCATCTGACACAAACATCACCGCCTTGGTGTA 122104 32 100.0 33 ................................ TAACCAAATGGCGCGAATCCCCTCCACACGGAT 122039 32 100.0 33 ................................ GTTATTCCAATGCAGCTGCTATCTTACTATGCA 121974 32 100.0 33 ................................ TAAATTGAATCAGCCCATCAAGATAAATGAACT 121909 32 100.0 34 ................................ GATGGATTAATCAAATTTAAGGAGTGAATCGCGA 121843 32 100.0 34 ................................ TACTTTGCTTGTTTTCAATTTCTTACACCTTCCA 121777 32 100.0 37 ................................ CTGGAGACTTCCATCTTGTTAATGAAGTCAAAGCTAT 121708 32 100.0 34 ................................ TTATTTTTGCCTTGGTATTTTTGACCAATCGGGC 121642 32 100.0 34 ................................ ATATGATGTTGCACCAAGCACATGAAAATACTCT 121576 32 100.0 33 ................................ AATGCTGTAATTGAAGAAGGCGGGTTTAAAGAC 121511 32 96.9 33 ..............C................. TTACCGTACCGCCTTGCAATCCGGAATATTCCG 121446 32 100.0 33 ................................ TTTAAAGTAAAACCCTTCAACACCTGTTACTGC 121381 32 100.0 33 ................................ TACATAAGGATTGTATATTGTGGCGGGCTTTGA 121316 32 100.0 33 ................................ TTCCATATCATCCTTGCGAAAAACAAAGGTCTT 121251 32 100.0 32 ................................ TCTCACTGTGAAGGGTGCGGATTTGTCTGCAA 121187 32 100.0 34 ................................ CAAGAAAGCGGAAGAAGTTAATTTGGATTTGGCT 121121 32 100.0 33 ................................ CGTTGTACTTGGGAATTTAACTACAGCTTTTGG 121056 32 100.0 32 ................................ ACAAAGCCAAAAGATATGTCCTGATTTATCTC 120992 32 87.5 0 ...C............T.A..........G.. | ========== ====== ====== ====== ================================ ===================================== ================== 38 32 99.5 34 TTCGCACCTTATATGGGTGCGTGGATTGAAAT # Left flank : TCCATTTTTATGGAAGTAGGTGTAGTATGTTAATTATAGTTACTTATGATGTCAGTACTTCAAGTATTGGCGGACAAAAACGCCTTCGTAAGGTAGCAAAGACTTGCCAAAATTACGGTCAACGGGTACAAAATTCTGTGTTTGAGTGCATTGTCAACTCTACACAATATACTGTTTTAAAAAATGAAATACTTAGTATAATCGACACCGATAAGGATAGTATTCGATTTTATCGTTTAGGTGATAATCACCATTCTAAAGTAGAACATTTTGGCATAAAGGAGTCTTTAGATTTAGAAGGCCCTTTGATTTTCTAAATCAATTTATTGGATTGGTGCTAACCTGAAGTGAACATGGATTACTAAGGAGGTTAGCACCTGTTGTTTCCGGCGGTTTGGTAGGTATTTTTAAGAAATAAAATGTTTTTTATGAGTTCAATTTTTGGGTTAGCACTTTTACACCTATCAACCGATGTTGTATATAGTCTGATACCGTTCGCT # Right flank : AAGTCTGTGAGTTAATTTAATTTCGGACGAAAAAAGTAGGTAGATATGAGCCATGCCCTTGCGGAAGTTTCATGGAAAATAATCCTCTATTGTTCCAGGTATTGGAAAACATCATACTGGAGGAGTTCCGTAAATAAAGCAAAACACTCAGTGGGAGAAGAACAAAAACTCCTACTGAGTGAAGTTTCGATTTATCGAATTTCTGAACACGCACTTATAGTCTTTTTTTAACTGCTGTTAAGGAAGTATCTATAATCGAAATCATTTTTTCTACTTCATCTTTTGTGATACAGAATGGCGGTGCAAATGCAATGGTATCCTGCCCTTCATAAACAATCGCCCGGCCGATCGCCATTCTTGTTGATGCTTGGTATCATACATATAATTTCGACATAATTTGTTAAATTCCTTTTAAAAATTTAAATAAGTTTCTACGATATATTAAAACTAGGACAGGAATGTAAGTAGATTCATTGATACTTAGGGGAATTTTCCTTAAG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCACCTTATATGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.60,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //