Array 1 1016518-1018559 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084829.1 Klebsiella pneumoniae strain SB615 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1016518 29 100.0 32 ............................. CCGACGGCGGCTATTGCATCAATTGCGGCGGC 1016579 29 100.0 32 ............................. GTTCTACTGCGTTTGAAGATCTGATCAGCGAA 1016640 29 100.0 32 ............................. TTCTCCGCGTGCGGCCTGATCGCGGGCTTTAC 1016701 29 100.0 32 ............................. GCTGTATGCCTCGCCGGCCAGCTGCAACTACT 1016762 29 100.0 32 ............................. AGATCATTACCATGTTTGTTTGTCCATTTTGT 1016823 29 100.0 32 ............................. AAATTTTCCATGACGCGCGCGCGTGTGAGCAT 1016884 29 100.0 32 ............................. GAAAATAAGCTCCGTTCCTGACGCCCCGTCTG 1016945 29 100.0 32 ............................. TAAACGAACAGGGTAACCGTCTTATTGTCGCT 1017006 29 100.0 32 ............................. ATTTCATTGTGCCACTGAGTGTTATAAAGGAC 1017067 29 100.0 32 ............................. TTCATCTACGACATGTCAGCGCAGGAACTGGC 1017128 29 96.6 32 ............................A GCAACTTGTTAAAGCCAGCCTCAAGCAGCGAC 1017189 29 100.0 32 ............................. GGGCGCCCGTTGATGGATGAGATAGCAGATCT 1017250 29 100.0 32 ............................. CCAGCTCTGTAGGCGCTCTCCTGCAGGTTTCC 1017311 29 100.0 32 ............................. GCATCTGGCGTTGAACAGTCTTTGATATCTAA 1017372 29 100.0 32 ............................. TCAAAACCGCGGCCCCGGCAACTCAACGGGTG 1017433 29 100.0 32 ............................. AATTTAATACGCGCATCGAAGCTGGTAAAAAC 1017494 29 100.0 32 ............................. CAAAAATGAAATAAATCCGGTTTAGGGGGTTG 1017555 29 100.0 32 ............................. TTTCCACGGTCTCATCTTGTACCGCGTCGATA 1017616 29 100.0 32 ............................. TTAGTAGTCCCGGTTATCATTTGTCGGCCCCT 1017677 29 100.0 32 ............................. GCATTCTTCAAACTCAGAGCTCATCATCAGCT 1017738 29 100.0 32 ............................. GTGACGAATTTCGTTAACCTGCCGGCCAGCGT 1017799 29 100.0 32 ............................. AAAGATTTAAGTAGCGCCGGTAAAACCGGATT 1017860 29 100.0 32 ............................. CTCATCACCACGATATTGCGCCCGGTCACGAA 1017921 29 100.0 32 ............................. CAACAATTCTGCCTTATCAACGACAACGTTAA 1017982 29 100.0 32 ............................. GTCAGGGGATTACCATCCCTGACTTTGTACTC 1018043 29 100.0 32 ............................. AAACACAGGTCGTGCGCGGCACGGTGGTTCAG 1018104 29 96.6 32 ............T................ GTATGCAACAGCAATCTACAATGAAAAGATTA 1018165 29 100.0 32 ............................. GACTCAGCGGGAATGACGGCGCAGCGGGACGG 1018226 29 100.0 32 ............................. GTCTGTGAACCTGTCAGCAGTACACCCTGGAC 1018287 29 100.0 32 ............................. GCGGCAGGCGCTAAACGTAGTGAAGTGATTGG 1018348 29 100.0 32 ............................. CAGTGGGTCTTTGCCTTCTTTCAGACGGAGTT 1018409 29 100.0 32 ............................. GCCAGCAGAGGTGCGCATGGTTTTTTCTCAGA 1018470 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 1018531 29 79.3 0 ...........ATTC..........G..C | ========== ====== ====== ====== ============================= ================================ ================== 34 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : ATGTTCTTGCGGCAGGCGAAATTCAGCCACCCCCACCACCTGAAGGCGCACATCCTGTAGCTATCCCACTCCCTGTCTCTTTAGGTGATGCAGGCCATCGGAGTCGTTAACGATGAGTATGTTGGTTGTGGTGACAGAGAATGTTCCTCCGCGACTCCGTGGACGGTTAGCCGTCTGGTTGCTGGAGATTCGCGCTGGTGTGTATGTTGGGGACATCTCAACAAAGACACGAGAAATGATATGGCAACAGGTTTCCGTTCTGGCAGAAGAGGGGAATGTTGTTATGGCTTGGGCGACGAATACCGAATCCGGATTTGAGTTTCAGACATATGGTGTGAATAGACGTATTCCGGTGGATTTGGATGGACTGCGGTTAGTATCTTTCCTTCCTTTTTTAAAACAATGAGTTATATGCTCTTTAATAATGTAAATTGTTTCTTAATTGTTGGTGAATTGTTTTTCAGTTAAAAGCTTTTGATATTGAAGTCTATTTTTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTAAGGGTGGGTACGAAAGCTTGCGGAAAATAAGTATCGCTACCTGCCGCTCTTTAGCGGAATGACCCCTTAATTAGCGATATCACTGCTTTTTTACTGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGGACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //