Array 1 14867-8879 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADAML010000013.1 Sulfolobus islandicus strain REY15A Scaffold13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ================================================= ================== 14866 24 100.0 39 ........................ ACACTGGGCGATAACGGGAACGACAGGGGCGGGAAAGAC 14803 24 100.0 40 ........................ TTTATTTTTTCAAACTAATTCGCAAAAATTGAAAGTCGAA 14739 24 100.0 41 ........................ TATAATTATCTTTAGTCTTCCATCCATGGTATTTCAGAAAA 14674 24 100.0 44 ........................ TATAAATATGGTGTCAGTGACGAATTAAAAATAACATAACCAGT 14606 24 100.0 40 ........................ TTACTTCTTAGTGTTTTTACGAAAGTGAAAGCATTATCGC 14542 24 100.0 42 ........................ TCAATATATCTTCCAATGCTGTTTTTGATATAGTCGACAACC 14476 24 100.0 42 ........................ GAAATAGAAAAAAGCTTTAAGAATTAAATATCTCTTCTGCCG 14410 24 100.0 40 ........................ AAAGAAGATCAAGATTTAAGATATGTAATGACCTTTGGAC 14346 24 100.0 39 ........................ CAACTTTAACACCAATTTTTTGGTTAATGGCACATAAAA 14283 24 100.0 40 ........................ TCATCTAAAACGTAGATATTGTATAATGGGGGCATTCTAT 14219 24 100.0 37 ........................ ATATTGCTTTAATCCTCGACCTACTGTCCTTAGTTAT 14158 24 100.0 39 ........................ CACTAATTATTGAACTAAGATGGGTTTTGTAAACTGTCC 14095 24 100.0 41 ........................ AAAAAATAGATATTACTTTATGCTTTGTCTCCTAGAGCGAA 14030 24 100.0 39 ........................ TATAATAAATATTATGTATATGGTTTGATTTACTTGTTA 13967 24 100.0 43 ........................ ATGTTGATTATAGTTAACTGTCCATTTTGATAAATTTCTATTC 13900 24 100.0 40 ........................ TTAATTTTATCATCACCCTATTTTCTCTTGCTAATAACTT 13836 24 100.0 42 ........................ AATGTATACACTTGATAAATTGGAATTATAACTTTCAATCCA 13770 24 100.0 38 ........................ GTCTCAAATATGTAGCTATTGCTGAACGTTATGAAAAA 13708 24 100.0 40 ........................ TGACTGTTGATATAAGCCGTATCATTAATGCGTATAAGGT 13644 24 100.0 40 ........................ TTATTATATACGATAATATCATAGCCAACGTCTTTCAACA 13580 24 100.0 37 ........................ CCACCTGGCGTGATATAGATATTCTTATATTCAAGCA 13519 24 100.0 37 ........................ TTACTAAGAAATACTGAACCATACATATTATTTCTAG 13458 24 100.0 45 ........................ ATTATAGAGATATGGACTCTCACAAACAAAAGAACTGTAAACTGG 13389 24 100.0 42 ........................ ATATTGATTGATTAAAATAGCGTTGTTTAGATAGTTGTTAAT 13323 24 100.0 44 ........................ GTTATCGTACTTAATTAATATGTTGAATGGTAACGTTATGTCTA 13255 24 100.0 39 ........................ TCATACACCTTGTGATTAATTTTGTTTGACTTTAACGCT 13192 24 100.0 40 ........................ AAGTTTATTACCATTTTTGCTGAAAACGAGGATGAGGCAA 13128 24 100.0 45 ........................ TTAACACTAGAATTTTAACGTCTTCGTCACCGATATGATATTCCT 13059 24 100.0 44 ........................ CTTGTTCTTGTACTAGTTGGTCTGGCACCTCGACTATAACTTTG 12991 24 100.0 43 ........................ TCATCAGAGACCCCATCCTTAACTTTCTCATCGCCTTGGAAGG 12924 24 100.0 41 ........................ TCTATTCTTCCAATACCTCTCTAATTCTCTAAATTCCTCCT 12859 24 100.0 38 ........................ AGTTCATAGAGCCCTATGGGAATCCCTACTAATCCCGC 12797 24 100.0 47 ........................ TTTGTGCTATATATAATGTAAGCTTCTGATGAATTGAAAAATATCTG 12726 24 100.0 42 ........................ TTTTTCAGCGTCAGGCCAGACAGAAGCGATAGTTCTATTCCT 12660 24 100.0 41 ........................ TTCTCTATTCCAGCCATCTCAACAACTCCTCCTCTTTAACC 12595 24 100.0 42 ........................ GTTTCACTAGACCGTGACTGTCGTTTAGCTCCAGCGGACTCG 12529 24 100.0 45 ........................ AAAAATATTTATAGAGAGAGATGAGTGAAAGTATATGGCAATAGG 12460 24 100.0 39 ........................ TTTTTCAATATAAAACTACATTCCTGCCATGAACCATCT 12397 24 100.0 42 ........................ GAGAAAGATACGTGTTATCTATTCGTAGAGCTTCTTATTCCT 12331 24 100.0 41 ........................ TCGTTTTTTAGGGAAGAGTTTGGCGAGTGTGCAGCTTATTA 12266 24 100.0 41 ........................ TCGCTATTATTGTCAAAGAAATAATATACTTTTATCTCCTG 12201 24 100.0 39 ........................ TTTTTATCAACAATAACCTGAAATTCCTCGAATCTAAAT 12138 24 100.0 43 ........................ CTCAATATTTTCAACCGACTGGAATAATATAATAAATCTGAAA 12071 24 100.0 39 ........................ TCATTTCCTAAGATCCCTTACATTTTCCAAGTAAGAGAA 12008 24 100.0 38 ........................ TTAGGAGTCGTAGCACAGGGAGCTGTACAGTCACAGAA 11946 24 100.0 39 ........................ ACTATATACTCATAATCTCCTATTATTTGCCTCTCGGCA 11883 24 100.0 39 ........................ TAAGTGTTACGATCTTTTTTACCGACCCTTTTTCTGATT 11820 24 100.0 38 ........................ ATTCTGTTCTTTGAGAACGGGTATGAGACTATCTTTAG 11758 24 100.0 40 ........................ AATATAATTCTTGTAAGCCTAACACAATTTTTCTAACTTG 11694 24 100.0 41 ........................ ATTCTGTTGTAATAGTTCTTGTAATTCTTGTAATGTTAACA 11629 24 100.0 40 ........................ TCACTCTATTAGGCTATTGTTGTTTGTGCTTCTTCCCTGT 11565 24 100.0 40 ........................ AAAATGTTAAACATTCTAAGATCTTGAAAATCTGTTCTTG 11501 24 100.0 39 ........................ TCTTCTTAGTTACTTTGTTTACGAAATCAATTGCATCCT 11438 24 100.0 37 ........................ ATTTTGGGTTGAAAAATAATTATATAATTAATAACTA 11377 24 100.0 43 ........................ GGCTGGATAAACTGCACGTGCACCGGTGTTTGGCTAGCGGGCA 11310 24 100.0 44 ........................ GCGGGAATTGGTGTGGAAACTCTATCACAATCCACCTTCTCCAG 11242 24 100.0 43 ........................ ATGGAATTCTTTCTATATACGCGACCTTTAGGATAACTATAAT 11175 24 100.0 40 ........................ GCTAGCTGCGAAATTTGTATCGTTAGCTCGTAAGGCAGAC 11111 24 100.0 42 ........................ CATTGACCTTAAACGTTACAACTCTCACGGGATCACCTCATA 11045 24 100.0 39 ........................ TTATTTTATCAGTAGGTACACCTCTGACTATTTTTAATT 10982 24 100.0 41 ........................ ACACTGTATGTTATGATATGAAAACCTGGAAGGAACTCGAT 10917 24 100.0 44 ........................ TTTTGATTTATTTATACTGTTTATTAACCTTAAGATTTTTTTCA 10849 24 100.0 40 ........................ AGGAATGTAAAATGTACCGCCCTAGGAAACACGAAACTCC 10785 24 100.0 44 ........................ TCGGAAGAGATAGTTAATTCAATAGTTGTTTTTTCAGTCTTGGT 10717 24 100.0 37 ........................ AACGGTAAAAACGCGTAAAACAACCTATTTTGGGTTG 10656 24 100.0 41 ........................ TTCTGCACTACTCCTAACCTTAGTTAATACGACACCTATTA 10591 24 100.0 43 ........................ AATTTAATTTCCAAAATTACAATTCCTAATGGAATAGCGGGAA 10524 24 100.0 40 ........................ TTAATTTCAACAAAGAAAGAGCCGAATTACTTAACGATCT 10460 24 100.0 42 ........................ TATACTGGAATGAACCCAATACTAACTTCTACATATGCACAA 10394 24 100.0 38 ........................ GCAGGGTTCGTAGATACTTAAAAGAGCTGTACGGGGAA 10332 24 100.0 41 ........................ TCCTCTGATGTTGGTGCTAGTTTTACTATCAGCGATGGCAA 10267 24 100.0 39 ........................ AATTTGCATCTTTATATAGAGAGTACAAGTTCTTTATCT 10204 24 100.0 40 ........................ TTTCCAGAACACGAATCTCGTCTTTTAGTTTATTTAATTT 10140 24 100.0 43 ........................ TAAATTGTATACATTTCACCTGCTAATTTATATATAACAACAT 10073 24 100.0 43 ........................ ATTACTGGATCTTTGAGTCCTATTATTCCTATTACTTTGTTAT 10006 24 100.0 42 ........................ ATGATCATACATCATGTCATAACTTTTCATGAGTTTCTACGC 9940 24 100.0 41 ........................ TTAGCAATAATTACGCCCGAGATCATAGGACTGGCTTATGG 9875 24 100.0 39 ........................ TCTGTTACGCCGAGTGCCGGTAACACTTGAGCCATTTGC 9812 24 100.0 39 ........................ CAGTTAATGTCGTTAAGTTCTAGGTTTAGCAAAAGTCGA 9749 24 100.0 39 ........................ TATATTAAGGAGATTCCTAATTCTGAATGCTAACTCTTT 9686 24 100.0 37 ........................ GGTCTAGCCGTAATTAATGGGAAAAATTGATATGACT 9625 24 100.0 40 ........................ TTTGTAAATTGTATTATATATCCATTCATATCTACAGATC 9561 24 100.0 40 ........................ GCTCCACCGCCTTTTACCATTCCCTGAATATGATAATAGT 9497 24 100.0 41 ........................ CTTTCTTTCTGCTTTTCGTACTAGGTTTTTCTTCTTTTTCT 9432 24 100.0 39 ........................ AAAGTTTCACCGAGTGGTCTATGGTTATTAATAAAATAT 9369 24 100.0 49 ........................ GAGTAAAATCCTAACTTTGAAAGGTAGGCGTCTAAAAAATTGTTGTCCA 9296 24 100.0 45 ........................ AAAAAAGACTTAATAGTTACAGCAAAAATGGTCAAAAAAATACAG 9227 24 100.0 41 ........................ ATACTTTTTAACGTTTTCATTTATCATGTTTCTATCACTAA 9162 24 100.0 42 ........................ CTCCTTTTTCTCCTATAGTAGGAATAGATAAACAACTTCGCT 9096 24 100.0 39 ........................ TTCGTACTGTCCTCTCAGCAAAGCCCTATATTTTTTCGT 9033 24 100.0 42 ........................ AAAGGAACACCAATTCCTATTCCTACAGCTGCAGCTGTGCCG 8967 24 100.0 41 ........................ TTATTGAATAAAACAGAGTACAAAATATTTAGTGGTGATAA 8902 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ================================================= ================== 93 24 100.0 41 GCTAATCTACTATAGAATTGAAAG # Left flank : TACTAATTTTAATTTCAATAATTTCCGGATTAGGATAGCGAAGTCGTAGAGTTTGGATTTTTAAGTTTTCTATAGCGGCTTTAGTTCCTTCCACTATGGGACTAGGAACTACTATAAGTAATTTATCCTCCTTTTGAGCCGAAGTCTCATTAAGAAGTCTTAGAAGATAAGTTTCATTAAATCCCAAAGTTACAAAGTATGACTTCATCATTATATATGGTAATATCATAAATAAATAATTTTTGATTACTTTCGAGGAACTCTAATTACAATTTTTGTTCCCTACTATTTCCGTTGTTTTCCTTTTTCCTTGTTTCGTTTTGGGTTAGGTTGTTATCCTAAATTCATTATCTTTATGAAGAATTCCTTAAGATCCCGGGAAAACCCGGGAATAGTAAAAAAGATAAGAAAGAGTAATATAATACTAATCGAAGAGTAGAGAAGAAAAACTTATAAGAAAGGGAGAAGAAAAGATCAAATAGAGGGTTAAAAAACCCTCA # Right flank : TATTATGGCCTATGATTTTGACACACTTTCCTCAATTTTCCTTTCATAATCAAATTATTATATAAATTAATAAATTAAACGAGAAAACTCTTTAGTGAATTTACTGCACGTAATACGGGATATCTTTTTCCGTTGATGAGAAAAATTTAATACTTTATTTTTCGGATTTAGGGTATGATATTACTCTTAACACTTGGCTTTGATGAGAAGTTTCAATACCGTGCGTTAATGAGGCAAGGTAAGAGTATTGAAAAGGTCATTATTGTTGGGGGTTTTGAGGAAGAGAAGGCTAAGAAAGCGTTGGAATCCCTTACCAATTTCTTAAAAACAGTTAACGTTCCTTATGAGACTATTGAAATTGACCCTAGAGACTTTGAAAATATTGTTGAGAAAGTTGGCAAGGTTATTTTAACTAATGCAGGGAAGGATTTCATGGTTAACCTAAGCGGAGGGATGAGATTAATGATTTTAGCAGTATTTTCCGCCTTTTTATTGACTGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTAATCTACTATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 2 18918-26299 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADAML010000013.1 Sulfolobus islandicus strain REY15A Scaffold13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== =============================================== ================== 18918 24 100.0 39 ........................ AAATTCCAATTAATTCTACACCTTGTAAAAATATTCCAA 18981 24 100.0 40 ........................ CTCTTGTAAGCTTTAAGAATTTCAATCTTTTTATTTTCTT 19045 24 100.0 39 ........................ TGAGAAAAGATAAATGGTGAAAGAAATGAGATTTAAAGA 19108 24 100.0 40 ........................ CTGGTCCTCCTATGGACCAAATATAATATATTATATCTAG 19172 24 100.0 42 ........................ CTTTCCATTTTACTATTTCAAAGACCTTGTCGCTGAGAATAA 19238 24 100.0 40 ........................ GTTGGCATAATCCTCAACATACTTTCTTGTGTCGGGTATG 19302 24 100.0 39 ........................ TTTAGAGTTGGAAAACAACAATCAGACATTTATTGACTA 19365 24 100.0 39 ........................ TTGTATATCACTTTTTCCTCTTTCTTGAAGATAATTTAT 19428 24 100.0 39 ........................ TATTATTCTCCTTTTCAGATCGTTTTCCTTTCTGTTCTT 19491 24 100.0 40 ........................ GGTTTGAACTTCGAAATTGACGGTGGTGTTGTAGTTTCTT 19555 24 100.0 40 ........................ TTCCTGTTTATTCTTATCCTTTAGAAATTCCTGCAAAGGC 19619 24 100.0 39 ........................ TTCTTTATGAAGTTCGACAACGGTAAGCTAGACTTTAAA 19682 24 100.0 40 ........................ AGTAGTGCAATAATCACAGTAATGGCAATCCCTATCAGTG 19746 24 100.0 41 ........................ GTCCATTTCGTTCAATAAATTATCAGAAAAAATAAAAACTT 19811 24 100.0 44 ........................ CCTAAGAAATATGGTTTATCGTTAGGTGGTGGGGTTGAAGTCGT 19879 24 100.0 39 ........................ CTCTGTAAACTGGGGTGTTTATTCAGTTTTTGTAACGTA 19942 24 100.0 40 ........................ GCGATATAAATCACACCGTTAAGGTACGATACAAAGTTGA 20006 24 100.0 40 ........................ CAATAGTGCGAAAAACTGAATATATGATACTTTGCAGCCG 20070 24 100.0 44 ........................ AACAAAATAATTATCCTCCACCAATAGGTGGGCTAACTACATCT 20138 24 100.0 40 ........................ CAAATTTTTAAACATATTCCTGAATTTGTGCTTTTAATAG 20202 24 100.0 39 ........................ TAAAGTTATCGATCTGCTCCGGTAGGAAGAAATAGACGT 20265 24 100.0 42 ........................ CAAACGAATAATTAAATAGACAGAGGGGGAGAGTATGCAAAA 20331 24 100.0 40 ........................ GATTTTCTTGCCTTAAAGTATGACACTAGCTATAGAGTAA 20395 24 100.0 43 ........................ GGATATACCGTATTTCTCAGTGATTAGCTCTAATTCGGCGTAT 20462 24 100.0 40 ........................ TTCTAGTTGACGCTAACGACAGAAACGACAGTAGTTTCAG 20526 24 100.0 41 ........................ ACATTTTTTTGATGTATTCTAATGTCTTACTCATATTTATG 20591 24 100.0 42 ........................ ATTAGAGTAAACATTGATTGGGAAGATTTCAAGAAAGATCAG 20657 24 100.0 37 ........................ TAATTTTCTCCCTTAACCTAAAAATTTCTCTTTATAA 20718 24 100.0 42 ........................ CATCTGGCGGTATCTGTTCACGTTCTTCTATTGGTATATAAA 20784 24 100.0 41 ........................ GAATAACAAACATAAGCGTCCGCAGTGCATGCTGAAATTGT 20849 24 100.0 39 ........................ ATCAATGTCATGGACAATCTAGATTTAATTCCTATGGAG 20912 24 100.0 41 ........................ AATGAAGAACCTAGCCACCACCCAATTCCCAGCATTGCGAT 20977 24 100.0 43 ........................ TTGACAATCTTTTGTTGATGATTAACGTTAGCAACCAAATTAT 21044 24 100.0 40 ........................ CTCGCTAAATAGCTAATTAATGCGTAACGAAGTGAGTGTG 21108 24 100.0 39 ........................ ACTATTATCGCATTTTCTTGGCTCGTCATCCATGACAAC 21171 24 100.0 42 ........................ TCTAAAGCTCTCGTGTAACTCAGAAAACGTCCTACAGTATAG 21237 24 100.0 46 ........................ ATGAAAAAAATTATTTTTCGTTAATCTCTACTGGATAGATCGCTCT 21307 24 100.0 39 ........................ GGTTGAACAATTAGTGTATGCGATAAATCCAAATACCGG 21370 24 100.0 40 ........................ ATAAAAAATATAGAAATTATGACATTGTAGAATTCCTTGA 21434 24 100.0 47 ........................ CCGACCCTTCTCTGTAAGCTCATAAACATAAATCCCTCTTCTGACAG 21505 24 100.0 42 ........................ ATTGTGCAGTCTGTTGCGGAGAAGTTTGCCATATCGTCGCGT 21571 24 100.0 45 ........................ AAATATTGTTGTAGTGGGCACTGATCCGCCTACGACTCCATTACC 21640 24 100.0 38 ........................ CAATAATTGATAAAGTTCCGCTGTGATTCTCTGACTTA 21702 24 100.0 40 ........................ GAAGCTTCGGCACTGACTTTACTGTTGTGATAATTACTAA 21766 24 100.0 40 ........................ GTTAATGATTTCGCTCCTAAAAATCCACTATTTAGACCAG 21830 24 100.0 41 ........................ TAGAGGAGAAGACAGAGAGTAAGTGGCGGGGTCTGCAAACC 21895 24 100.0 39 ........................ CTTCAAATTCTACTATTTCTTTCTTATTTTTTCGTGACC 21958 24 100.0 40 ........................ TTTTATTCTATGTGGAGATGGTCAAATATAGAGTTCTCAT 22022 24 100.0 42 ........................ TACCAAAATGATAGGTACATTTGCCACTCTGAAGAGGTCTTT 22088 24 100.0 45 ........................ ATTACTTCTATGCTGTTCTTCTTCGACCCGACTTACATAACCCAA 22157 24 100.0 40 ........................ CAGATGTACAAAGTAAATCCAGGGAGGATTTAACACATTA 22221 24 100.0 41 ........................ TCAGTTACGTCTAATATTAATCGTACTAATGGCTCTAATTT 22286 24 100.0 42 ........................ TTCTTGATAAAATAGAAAGGATTGTAAAATGATTTTTATTTT 22352 24 100.0 39 ........................ ATGATTATGAGAAAGCAATAGAATTAGATGGTGAGACAA 22415 24 100.0 40 ........................ TTAAATCGGACTGAAATTATCACATAAAGCTGATAGTGAA 22479 24 100.0 40 ........................ GAATTCTTTTTTCGAATTGCTAATCTTCTTACATTCCTGG 22543 24 100.0 39 ........................ AAGACTGATAACATATGGCGACAAAAGCGTAATTGAAGT 22606 24 100.0 39 ........................ CGCTCTTTACCGTACGGGTCGCCACTCCGTACGGTAGCA 22669 24 100.0 40 ........................ AGAGGACACAAGCTTCATAGTGACCTGAACGGTGCTTTAA 22733 24 100.0 40 ........................ AAAAGCAGAGCAGTGGTCTTATTGCATAGAAGCAGAAATG 22797 24 100.0 39 ........................ AGAATACTAATTGTTATAGAATCATTTGGCAACCTATAT 22860 24 100.0 38 ........................ TATTTTTTAATCACCACATGAATCCGTTAAAGAACTCA 22922 24 100.0 39 ........................ TTTTACCCAATGCACCGTATTTCTACTATATACTCCCAA 22985 24 100.0 40 ........................ TTCATTACCTTTTCCATGGGTTTGGATTTGTTTTGGGGTG 23049 24 100.0 42 ........................ CTATTTCACGGAGATGCTGAAGATCCTTTAACAGCTCTCCCT 23115 24 100.0 41 ........................ TACAAAATACGAATTCTCTATTATCATCAGTTATAAAAGTT 23180 24 100.0 42 ........................ GTGACCGCTAACAACAAAAGTATGAAGAAGGCCGCAGCACCG 23246 24 100.0 37 ........................ CATCCTCGTGCTTGAATGTATGGATACTTATCAACTG 23307 24 100.0 39 ........................ TTAAAGCTGCCAATAGGATTTGTAACAGTTGTACTACCA 23370 24 100.0 42 ........................ TCTTCTTTGTCATCTTCGCAGTCGCGGGGCTTATCGCTTATC 23436 24 100.0 40 ........................ AAGCCGATAGCAACCCCTATGCCTATGCCCATTATTACCC 23500 24 100.0 40 ........................ GTGGTGGTGAAGATGAAGATGGAGGAATTCCCCATGAATG 23564 24 100.0 42 ........................ TGATTTTAGGATCAAATTATGGAGTAATTCTCCATTCATATC 23630 24 100.0 41 ........................ ACTCTCTTTTTTAGGCGTTTTTAAACCTTTCCCTAAACTTA 23695 24 100.0 40 ........................ TAGTATATTCCCCACCGCCAACGGTCAACAATCTCATCTA 23759 24 100.0 40 ........................ GAAGTCCTTCGCGGTCTGGGATGGCTAAATAGCAAAAATG 23823 24 100.0 41 ........................ CAATTCTGCCCAATTTCGTTCAGGTCCTTTCAGATCTTTCT 23888 24 100.0 41 ........................ TTTCATCTTTCTGGGCAGACTCAAAAAATCTAATCAATAGT 23953 24 100.0 40 ........................ TATTCTGTCTTCTAATTGTTTATCGTCAACCGTTAATACC 24017 24 100.0 42 ........................ ACTAATATCAATTATCAAAAGTATAGATGAGGAGAGACCTCG 24083 24 100.0 39 ........................ ATACTGGGAAGCATTTTTATTAGTCTCCCTACCCTTTCT 24146 24 100.0 40 ........................ TCACCCTCAACAGTGACAATTTTTCCGTTTAGTTCTATGG 24210 24 100.0 42 ........................ AACGCTATTTCTTTAATTGTAAAGCCCTCGCGGGCTAATAAA 24276 24 100.0 40 ........................ TCGCAGATAATTGCAGAGGCTAAGAAGGCGAGCGATTATT 24340 24 100.0 40 ........................ CTTGATCCTTCTTGAAGTCTTCCCAATCGATATTGACACG 24404 24 100.0 41 ........................ TTTAACTCCCCAGTTTCTCTCTTTATTCTCTCTATTATCAT 24469 24 100.0 40 ........................ AGAGACTCGGGGATATGTAGGATATTTATCGCACCATTCA 24533 24 100.0 39 ........................ TCCAGTCTGCAATGTCACGGAAGAACTTTGCGACGCCTA 24596 24 100.0 41 ........................ TCCTTTCCAATTACTTCAATTACAACTCTATTAACAATATC 24661 24 100.0 39 ........................ ATCGATTACCGATATTCTGGCCCCCCGGCCAGAAATTTG 24724 24 100.0 39 ........................ TATTTAAGAAGAGATAAGCGGCGAAAAGTTTAGGCAATT 24787 24 100.0 39 ........................ CCAGAGTCCTTGTCCCAAGGTATATAGCTACGAGTGATG 24850 24 100.0 38 ........................ CAACAGGACTTAACTAAGATTTGTAGTAGCGAATTTTT 24912 24 100.0 40 ........................ ACACTAGTGACGTCGCCTGCCATGAAAGCTACCATGTTAG 24976 24 100.0 41 ........................ ATGTAAATCTCTAGTTCCCTACTGACGTCGTAGTATGCCAT 25041 24 100.0 43 ........................ AGAGTATCATCTTGCGAATCAAAAAAATAGTACGTTTTTACTA 25108 24 100.0 40 ........................ ACACTAGTGACGTCGCCTGCCATGAAAGCTACCATGTTAG 25172 24 100.0 41 ........................ ATGTAAATCTCTAGTTCCCTACTGACGTCGTAGTATGCCAT 25237 24 100.0 43 ........................ AGAGTATCATCTTGCGAATCAAAAAAATAGTACGTTTTTACTA 25304 24 100.0 41 ........................ CAAATTCATCAATTACAATTTATATGTTTGTAAGAAATTCA 25369 24 100.0 39 ........................ TCTAGGTTTAAGACTTGGCTCAGAACTTTAGTTAAGTAA 25432 24 100.0 43 ........................ CAGTTTTTCCAAAGAAGTTACAGGTATAGACATATCGGGCGTG 25499 24 100.0 44 ........................ ACTATAATGAATTAGATCTTTCCTAGTTCTGCTTTGTATATCCG 25567 24 100.0 41 ........................ ATCTACAATATATTGTTTGTTTGGTGGTATATAAAGTTTAT 25632 24 100.0 39 ........................ GTAATTCTTCTTCAGTCGGTAGTTCGTTTGAAGCCCCTA 25695 24 100.0 41 ........................ TTCTTTTTACTAAATACGAATAATCCAATCAGTGACTCCTT 25760 24 100.0 38 ........................ TAAAGTGCAGACTCACTAACTCTCTTTCAGTGTCCCAG 25822 24 100.0 38 ........................ TATCAATTTCCACCACATTTACCCAAAACTCATTGCCG 25884 24 100.0 44 ........................ AAAGTTCTTATGGCAAAAATTAGGAAAAAACTCCTCAACTACGC 25952 24 100.0 39 ........................ TTCTTCCAGGGTCTGTCCTTCTGATTTTGTACATCTCTC 26015 24 100.0 41 ........................ AGAGATTTCCGAATTCCTGAAAGACAGAAAGTTCACCGCGT 26080 24 100.0 40 ........................ TGCCATCGAGTCACTAGGGGCATAAGTCAAATCGAACCCT 26144 24 100.0 42 ........................ GACAAAGTTAAAGAAGAGGCAATGAGACAATTTTCATTCTAA 26210 24 100.0 42 ........................ GACTATATAATAGCACAAATTACTTATGATCTGAAACAGCTG 26276 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== =============================================== ================== 115 24 100.0 41 GCTAATCTACTATAGAATTGAAAG # Left flank : TCAGACATGGACAAGCCTAGATATCTTCTGGGTTTTATTGGAGGCATATGATAATTCCAACCCCTTAGTTCCTCCTCTATAGGGTCAGAAGCCCTATAGGAGTGAAGCCTCCTAACCTGTCTAATTATCTGCGACCTCACATTATACATTATGCAAAAAGAATCTAAAATACACAATAATGATCCTTGTAAATTTCTTCCCGACTTTAGTAAGGATAATCTTAATAAACGACGATTTTCCTCTTGATGAAGAATAATGGAAAATATAGGGAAAGTGTTCTCCCGTATACGATCCTTGTTTTCCTTTTTCCTTGTTTCGTTTTGGGTTAGGTTGTTATCCTAAATTCATTATCTTTATGAAGAATTCCTTAAGATCCCGGGAAAACCCGGGAATAGTAAAAAAGATAAGAAAGAGTAATATAATACTAATCGAAGAGTAGAGAAGAAAAACTTATAAGAAAGGGAGAAGAAAAGATCAAATAGAGGGTTAAAAAACCCTCA # Right flank : GTCATACGTTTCCCCGACTACACACCAAAGGAATAAGGTAATGGTTTCCCTATTAATGGAGCGGGTAATATTCTAGTAAGAGTTAAGAGTAGGTAATTTATCCACCAAAATACTAAGTTAAGCACGTAAAGTACCTTGAGGTAAGCAAGCTTGAAAATCATGATCATAATTATCCCTGCAACTATTGCAATTACTGAATCTATTACGAAGAATAACCTTATTCCGTAAGGTAGTAAACTAATGTTATATAATGGAAAATGATCGTAGGCCCAGATGAAAGATAATATACCTCCTACAACTCCCAATATAATTGAATTTTGTTTTAGCATGAGCTACTCTTCTTACCCTATTTTAAAATCTCTTCCCAAATCTAAAATTAAATTACATAAATTGGGAAAAGATTTATATTAATTGATGAAAAGATTATCTCGATAGAAATGGATAAGAAAAAATGGTCCTCTTAGGCCTCTCTGCAATAATCCTAATAATAGGAGGAGTTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTAATCTACTATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA //