Array 1 2672702-2665409 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019041.1 Acinetobacter junii strain 65 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 2672701 30 96.7 30 .............................G GTGCAGGAAAAACCCTTTATGCAGTTTCAC 2672641 30 93.3 30 ............................AC AATGGGAATGTGGAGAAAGTAGGGCGGTTA 2672581 30 93.3 30 ............................GC AACAACAGCACCTTGTTTTAAACGTGTTAC 2672521 30 100.0 30 .............................. TTTCACGAATAAGACAGTACATAGCGAATA 2672461 30 96.7 30 .............................C GCACCTCACCGACAAGCTACGTATTTTTTA 2672401 30 93.3 30 ............................AA TCAAGCATGCGTGCTAGAACTGGATAAGCT 2672341 30 93.3 30 ............................AA GCCTTTGACCAATCAAGCATGCGTGCTAGA 2672281 30 96.7 30 .............................C GTTGACGATTTCACAGACCTTTGCCATGTT 2672221 30 96.7 30 .............................G ACGGCTCAATTATTATTTATGATGAAGTAC 2672161 30 93.3 30 ............................AA CAATTGCCAGAATGGTATGTAGAACCACAG 2672101 30 93.3 31 ............................CC ACAGATCGCATTGGTTTGTAACCTCGTTGAC 2672040 30 100.0 30 .............................. TCAGAAGAAACGGCCATCGCAGCAATCAAA 2671980 30 93.3 30 ............................GA CAAAGGGGAGTTGTTGAGAGCCTTTGCAAA 2671920 30 96.7 30 ............................A. TCCAGGAGCATCCTGTACCTGCTTTAATAA 2671860 30 96.7 30 .............................G TGAAAGTGACAGGGCATACGCTATTAGTTG 2671800 30 96.7 30 ............................C. CAACAACGAGTAGCTAAATAGCTAACAACA 2671740 30 93.3 30 ............................GA TATAGGCAGTTGAACCTGATCCATCTGGAC 2671680 30 93.3 30 ............................AA GATGAAATTATTGATGCGGTTCATCAGTTA 2671620 30 93.3 30 ............................AC AAACCTTTCAAGAGTGGAGAAGGTTGAGGA 2671560 30 96.7 30 ............................A. GCACTCTTAGAGCCTGTACTAGCGCAACCT 2671500 30 100.0 30 .............................. GTTGGTGCTTTCAGATTGCCTAATGGTGCA 2671440 30 93.3 30 ............................GG TTGGTAATCGAGAATATTGCCATGAATGAT 2671380 30 100.0 30 .............................. TAACATCAAAGCTCTCTAATTCAGTACCGA 2671320 30 93.3 30 ............................AC ATACTCACCTTGTTGCATTTTCTTTCACCA 2671260 30 96.7 30 ............................A. CATCGGCGATATGACCGAACATGTTTTACT 2671200 30 93.3 30 ............................GA AATCAACGAACGGTGACTAAACGATTATTT 2671140 30 96.7 30 .............................A TAACCATCAATGTATACAGGCACATCCTCA 2671080 30 96.7 30 .............................C TGGAGTTGTTCCAACTGCCGCCGTGTTAGG 2671020 30 96.7 31 .............................G AGTGCGAAGACGATTCTAGCCGCTTCATGCA 2670959 30 93.3 30 ............................GA ATGAGGTGAGCATGTTTAAGGAATTCTTTG 2670899 30 96.7 30 .............................G AACAAATTAAAACGGCGCTGCAGGAGCTTC 2670839 30 96.7 30 .............................A CGAGGAAATTTTATGAAACAAGCGCCTAAA 2670779 30 100.0 30 .............................. ACGACAGCATGATTTTTAATAGAGCTGCTT 2670719 30 96.7 30 ............................G. ATGCAATGACCGCAGCCTGACGGCCAATGA 2670659 30 93.3 30 ............................AA TCGGAAGTCTCGGCGCTGCAACGGTTGATA 2670599 30 100.0 30 .............................. GTTGGTGAGCCTACGGCCATACGATGCGAT 2670539 30 96.7 30 ............................G. CGAGATCATTGGTCGGGCTGGAAAGCAGCC 2670479 30 96.7 30 ............................A. GCGGTAGTTCTTGTCATCCCACCACGGATA 2670419 30 96.7 30 ............................G. GTAGCTTTGAGCAATGCGAATGCACCGCTC 2670359 30 96.7 30 .............................G TATAGATTGCGCTGTTTGCGCCATGTTCAA 2670299 30 93.3 30 ............................AC ATAAAGGCGCAATACAAATTCTTGCTGACG 2670239 30 96.7 30 ............................A. ACTGTGACAACTGCTCTTCGCGGTGTAATT 2670179 30 93.3 30 ............................AC ATTAGCGGAGTAACAATATTAATCCAATTA 2670119 30 93.3 30 ............................GA TACAAAGCCTGACTCATGCAGCATTGTATC 2670059 30 93.3 30 ............................AA ACAGCGGCAATAACGGCGCTTTCACGTTCC 2669999 30 100.0 30 .............................. ACTGCCATCTATTCAGGTCAAAAAACTCAA 2669939 30 93.3 30 ............................GA GCACCCAATTCACGCTCGATGAAATGACGT 2669879 30 93.3 30 ............................AA CAACAGCAGTTTGTACGCCTGCTAGTTCTT 2669819 30 93.3 30 ............................AA TAATGGGACTCCCCAACATAACCATTTGCG 2669759 30 93.3 30 ............................CG ATGGTAATATACTCGTAATTCTGTATATAC 2669699 30 93.3 30 ............................AG TTAGTTAATGTCGTGGGGAAATTGACAACA 2669639 30 93.3 30 ............................AA ATAGCGATCCCAGCAGTAAAGCCAAGCCAA 2669579 30 96.7 30 .............................G ATACTGAAACCAATCAAGTAACCGATTTAC 2669519 30 93.3 30 ............................AC CGAGAGTCCAACCGCCTAGTGTTGTTGTAG 2669459 30 93.3 30 ............................AC CTCTTAGAACTTTTGCTACTTGGCTGACGT 2669399 30 93.3 30 ............................CA ATCAACAGTGCCTAGCAATTGCTCTACTGC 2669339 30 93.3 30 ............................GA CGACATCACAGATACTTCTGTATCTTTCTC 2669279 30 93.3 30 ............................AG AGACTTCATTTGTGTATTCAATGACTTCTT 2669219 30 96.7 30 ............................G. CTACAAAAATATGTCAATCGTGGTGCTGTT 2669159 30 100.0 30 .............................. AAGGCTGCCCCAGTTGATGGCTCTCTATGT 2669099 30 96.7 30 .............................A CGGTTGGTGCTGTCTCGAAAGTTCTTGCGC 2669039 30 96.7 30 .............................G AGTATTGCGACAACGATGGAAAAATGTCAC 2668979 30 96.7 31 .............................G ACAGGGAATACAAGGGTGATGATTTTGAAAT 2668918 30 96.7 30 ............................A. AGACCAGACACAGACACATCACTATTTACA 2668858 30 96.7 30 .............................G CTAACAATCAAATTGTCTATAAAACATCAT 2668798 30 93.3 30 ............................AA TAGTTCTCTAATTTCTTGTTGTGAATAATA 2668738 30 93.3 30 ............................AC ACTCGAAGCCCTTGTATATATGCACTATAT 2668678 30 96.7 30 ............................G. ATCTGCTGCGCTTATGAGCAATGCCAATGC 2668618 30 96.7 30 .............................G TAGAAGTAACTCCAGTAGAACGCAATATCT 2668558 30 96.7 30 ............................G. GAGTTGTTAGGTCGACAATCATGGGATTCT 2668498 30 96.7 30 .............................A ACAGCCAACCACAGCCCGAAAAAATTACTA 2668438 30 93.3 30 ............................AG GGTTTTTATCCCTGGTTCCAGGTCTCTTAC 2668378 30 93.3 30 ............................AA TTGATCTACAGCATCGAGTTTATTTTTAAC 2668318 30 96.7 30 .............................A CCGAAGATAAATACCAAGTTGTTGTTTATC 2668258 30 96.7 30 ............................C. GTGTTGTACATCGTTGCGAGAAATATTAAA 2668198 30 96.7 30 .............................A CCGAAGATAAATACCAAGTTGTTGTTTATC 2668138 30 96.7 30 ............................C. GTGTTGTACATCGTTGCGAGAAATATTAAA 2668078 30 96.7 30 .............................C ATTAACGGCCAAGCGTGGACACGAGAGCAG 2668018 30 96.7 30 .............................C CTCCGCCACTTGGATGCGCGACATTTTATT 2667958 30 93.3 30 ............................AG TGAGAGTTTCTTTTCTTGATCTTGTTCAGT 2667898 30 96.7 30 ............................A. AAAAGCCCCGATTAATTGGAAAGGGGGCGA 2667838 30 100.0 30 .............................. ATCAAGGACGCCTTAAGAAGTATTGCTCAT 2667778 30 100.0 30 .............................. TGCTAGCTACACCCTTATTGATTAGATCAA 2667718 30 96.7 30 ............................A. GATGTATACAATGTTACGCGCATCTGAGAT 2667658 30 100.0 30 .............................. AACGATGTACAATCGCCTGATTTTGAGAAA 2667598 30 96.7 30 ............................A. CGAGCAATTGAACCTAGCATTTCCTCTGTA 2667538 30 93.3 30 ............................AA TAGAAATTGGATTCACTGCATCAACATTGG 2667478 30 96.7 30 ............................A. GGTGTGGAAGCGTTCTGAATCCATGCGAAT 2667418 30 93.3 30 ............................CA ATCAGAGCGAGCAACAGTAATTACTAGTGA 2667358 30 100.0 30 .............................. GCACTGCAGAACGAGTTAAAAAGTTCATCG 2667298 30 100.0 30 .............................. AACGATGTACAATCGCCTGATTTTGAGAAA 2667238 30 96.7 30 ............................A. AGAGAGCATCATTTGAAGTGATTAGATCAT 2667178 30 93.3 30 ............................AG CAGCACCAGCCTTTAAAACTTTTGAAACTT 2667118 30 96.7 30 .............................A GTACGGCTTTAGCATCCGAACCAAATGGAC 2667058 30 100.0 30 .............................. TAAGGATTAAAACTGATTCAGGCTATCTAT 2666998 30 96.7 30 .............................C TATGCGGAACAATATGATCGACTACGTTAG 2666938 30 93.3 30 ............................AA TAGAAATTGGATTCACTGCATCAACATTGG 2666878 30 96.7 30 ............................A. GGTGTGGAAGCGTTCTGAATCCATGCGAAT 2666818 30 93.3 30 ............................CA ATCAGAGCGAGCAACAGTAATTACTAGTGA 2666758 30 100.0 30 .............................. GCACTGCAGAACGAGTTAAAAAGTTCATCG 2666698 30 100.0 30 .............................. AACGATGTACAATCGCCTGATTTTGAGAAA 2666638 30 96.7 30 .............................A TATTTGAGAAAGGGCCATTTAGCACTTAAT 2666578 30 100.0 30 .............................. TAGGAATCCACCACATGACATGGTAATGAG 2666518 30 93.3 30 ............................AA GAAGGAGCGAGAAGCCAAATTTTAGCTACA 2666458 30 93.3 30 ............................AG TAGGGCGAGAGTAAGACAAATAATTCTGCA 2666398 30 96.7 30 .............................A CTTGAAATAATTTGTTTTTTGCTTGGTGGT 2666338 30 96.7 30 .............................G CTCAGCAGATAAGTAGCCTGTTTGTTGTGT 2666278 30 96.7 30 .............................G CAATTCATTTACAGTTCTCGCCATAACAAT 2666218 30 93.3 30 ............................GA TAAGTTTTAATTTGTGCGCCGATGCCACAC 2666158 30 96.7 30 ............................A. CAATCACACAATCTTCATCCGAACCAAGAA 2666098 30 93.3 30 ............................AC GCAAGCGAGTTGCTTCTAAACGAGCATCTT 2666038 30 96.7 30 ............................A. CGTCATAAGCATTTAATCGAATACCCTCAA 2665978 30 96.7 30 ............................A. CTAGTGTTATTGGGTGGGTAAAACGATTTA 2665918 30 96.7 30 .............................G TTTGACCTGAATCCAAAACCAAATTAAAAG 2665858 30 96.7 30 ............................G. ACAGGCTAATGTTAAGCCATGTCGGGTGGG 2665798 30 96.7 30 ............................A. TCGGGGGTGATGTGAGTAAGCAAAACGATA 2665738 30 100.0 30 .............................. CACCCCGACTTTGTAATTTCCTCCGACATT 2665678 30 96.7 30 .............................G ATTCAACGGGTGGCAAAAATAAAGCTGAAT 2665618 30 100.0 30 .............................. ACAGCGCAGGGATGTGCTGCGGGTATAGTA 2665558 30 93.3 30 ............................AG CAATTCATGGTATGGGTTTTATTAGCGAAT 2665498 30 93.3 30 .............C..............A. AAAGCAATATTGACCAATAAAAGTAAGCGT 2665438 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== =============================== ================== 122 30 95.9 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GTAAATGGCTAGAACGATTCATTGATTATGTTCATATCATTCAACCGAGAGAAGTACCTCAAGCTAAAGTTACTGGTCATGCACACTATTATCGAGTCAATCCAAAGATGAGTGTTGAAGAGCGTATAGTTCATCAAGCGCAACGTCGAAATATTTCTTTGGATGAGGCTACGCAGCATTTTAAACAATATATTGAAAAACCTATTATTGAGCCTTATGTGAGTTTAAAAAGTCTGAGTGCAAAACGAGATCAAAATATAGATCGACCATATCGTTTATATATTGGTAAATCTCTAGTTGATGAGGCAAAAGATGGAGAGTTTGGAACGTATGGACTAAGTCGAATGGCAACAGTTCCAGAATTTTGACCCAATATTTTTTTACTATTTAACAGCTTAATAAAATCAATAAGTTACATCAAGTCGTTTTTTGATTGGGTAAATTGCTAAAAAACCATCATAAATACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : CATGTGATTTATTCATATGAGCCATTTAGAAATGTAACGGTCTTGATTGGCATTTGTTCTGTGTGTTCATTACGGAATTTATTTTAAGAATTAATAAGTGACTTATAATTCTTGTTCCAAAATTATCGTGTTATATGTCATTTAAAATACATAACATCAAGAAATATGATTCTTACTACATTCTAGATCTTTAATTTTTAAATAAGAAAATATACCCTGAAACTAACGTTTTTTTAGTGAAATTTTCATGCGTGGTTTATACCTCATCACCAATGATGATCCCATTCAGCTTCTTTTAGAAAAGTTAGAGGCTGCACTAGCTACTGGTCATATAGCTATTTTGCAATATCGTCGAAAAAAAATAGAAAAAATAAATCAACCATCTGAAGTGGAGTTGATCAAAGTCCTGAGTGAAAAATATCAAGTCCCTTTTGTCATTAATGATGATTTGGCGTTAGCAGAACAATTTGGTTTAGGTGTGCATCTAGGGCAGTCCGATG # Questionable array : NO Score: 5.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.18, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //