Array 1 17999-22362 **** Predicted by CRISPRDetect 2.4 *** >NZ_LTAV01000006.1 Marinomonas aquimarina strain 11SM4 NODE_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 17999 29 100.0 33 ............................. CGTGGGGACGTATAAAGTCAAATGAAATCAGGC 18061 29 100.0 32 ............................. TTTATTGCCGCCGCTTACACTAACGTCTGATA 18122 29 100.0 32 ............................. AATGCCGAGGGTTCGGTCGTTGCGATCGTAGA 18183 29 100.0 32 ............................. TGACCGATTCGCGCTTTGTAGAAATTGACGAC 18244 29 100.0 33 ............................. CGACGATAAAATCTTTGACCTTGCTTTTCAAGC 18306 29 100.0 32 ............................. TTAAACTCTCGATTAGCATCGATCTCTTCTTC 18367 29 100.0 32 ............................. TAGACCTCTTCTTCACATACGCCGCCAAGCTC 18428 29 100.0 32 ............................. ACTGAAACCGCGTGATCTGATAAACGTACTGA 18489 29 100.0 32 ............................. CCAGCATTTTGGTTGCTGCCAGCAGATATTGA 18550 29 100.0 32 ............................. TCAAACGAGTTCGCGCCGTCGTTCACCGCTTG 18611 29 100.0 32 ............................. GCAATGATCAAGAAGACCAAAGCAATGATGCA 18672 29 100.0 32 ............................. CGATCTCTGCTATGTGAGGCGGCGCCAGTTGC 18733 29 100.0 32 ............................. TATCTCGAAAGTCTGACTTACACGGACAATGC 18794 29 100.0 32 ............................. TAACATGGCATTAAACGAAGTAAAGTTAATTG 18855 29 100.0 32 ............................. ACCACCATCTTAAAAGGTATGAAAGACCAGTC 18916 29 100.0 32 ............................. GGGTGATTGTGCTGAAGGTGGTTGATGATGTT 18977 29 100.0 32 ............................. GTTCTGATGCATCAGCGCCTGGGTGATGCTCC 19038 29 100.0 32 ............................. TCAGTGTCGTCTACTGCCAGCGCTCTAACGCT 19099 29 100.0 32 ............................. CGCCGCTGCTTCCATCAAGTTCTTGTGATCAG 19160 29 100.0 32 ............................. TTTCCCCGACTACGGGGTTTCTGAGTTAGTAA 19221 29 100.0 32 ............................. TCTTTCTTAGAAAAGCAGCTCACAATGGATGA 19282 29 100.0 32 ............................. CCACCTATCGATGATCCGCATTCTTACCTTAT 19343 29 100.0 32 ............................. AGTGCAGGGCTAAGATGCGTAGTGTAATTATT 19404 29 100.0 32 ............................. AAAGAAACTGGCGGCACGGTATTTAATGAGCA 19465 29 100.0 32 ............................. AATATTTAGATACCTACATGGATTTAGATGAG 19526 29 100.0 32 ............................. CTACACCCAAACCGCCACGATTGGTTTTATTG 19587 29 100.0 32 ............................. ATGGTATTCAGGAAGCGCACCCGAAAGAATTG 19648 29 100.0 32 ............................. CTGGAATCGGCGGCGGAGCTGGCTCAAACACT 19709 29 100.0 32 ............................. TGCCACAACTACGGGAGGCGCTGGCGGAACAG 19770 29 100.0 32 ............................. TATGGCAGTGGCCTTACAGAAAGCTTCTGCTG 19831 29 100.0 32 ............................. TTTTGGAGGCTAAATAATGAAATACATTCGTA 19892 29 100.0 32 ............................. GCTGGGCATGGCTTAAGAAACTATTTGAAAAC 19953 29 100.0 32 ............................. ATCCGCACCGCCGCCGTAACCCATACCGCCTC 20014 29 100.0 32 ............................. TTAGCCGAGGCGCTTGACCACGCAGCAATCAG 20075 29 100.0 32 ............................. CGCCGCGTTGTCGCTGACTCGATCCGAGTTCA 20136 29 100.0 32 ............................. GTTTTAACCCATTTTATGTGGCGAAAGGGCCA 20197 29 96.6 32 .T........................... CGTTTTCCATTCTTATAGATGACTCACTAAAA 20258 29 100.0 32 ............................. CGATAAAAACATTTTTGACATTTTCATTGAAA 20319 29 100.0 32 ............................. CGGAGGTGGTGGAGATATTTGGTAATGAGCAA 20380 29 100.0 32 ............................. TGTTGCATTGATTTTGGAGTTACTGCGCCTGA 20441 29 100.0 32 ............................. CAAATTGAGCACGTTATAGAGACTCACCGTTT 20502 29 100.0 32 ............................. GAAACGTGCTCGCATTGCGTAGTACCCCTCCA 20563 29 100.0 32 ............................. ATGTAAAGGTGTTGTCGCCTAGTCCGTTGGTC 20624 29 100.0 32 ............................. ACTTATGCTGAAATCGAAGCAGCTACGGGGAT 20685 29 100.0 32 ............................. GCAACGGGGAAAATCACCGGCGATGCCACCAC 20746 29 100.0 32 ............................. TTCCTTACTTGGAGCTTGTTCAACTAGCAGGG 20807 29 100.0 32 ............................. CGAAACCGTTACAGCCCCATTGCAGCGCGCAC 20868 29 100.0 32 ............................. CGCAACTCACCAATACGCCCACCCCACATAAT 20929 29 100.0 32 ............................. CCACCCATGCCGAGTTTGTAAACAGTCTCGTT 20990 29 100.0 32 ............................. CGACGAGTTTGGCGATGGGTTGGTCTGAACAA 21051 29 100.0 32 ............................. TGTTTATGACCGCCGCCGTTAAGCGCGAATAC 21112 29 100.0 32 ............................. GTTCAGCTTCTGGGCTTCTTCAATTGAAAGAA 21173 29 100.0 32 ............................. GAAACTCGCGACCCCTGCTGTATCGTCGCCAA 21234 29 100.0 32 ............................. TCTTTACCTGACCTAGCCTTAAACGCATTGTA 21295 29 100.0 32 ............................. CGCTAGAGGAACAAATAGATGCGGCGGAAGAG 21356 29 100.0 32 ............................. ACGGTTGCCGCCCTGATCGGTGCTGACTACCA 21417 29 100.0 32 ............................. GCATCATCGAAAGCAACGACAACCTAAAGCAC 21478 29 100.0 32 ............................. GTGGCATGCTCATCAATAGGCGGTATGAGTAC 21539 29 100.0 32 ............................. TCCAACTAGATCATTTGGCGGTAGATCATAGT 21600 29 100.0 32 ............................. ACATACAATTTATCTCGACCTGGCGGGGTCGG 21661 29 100.0 32 ............................. CGAATGAATAAACTTATAAGCTGCTCAGTCGT 21722 29 100.0 32 ............................. GATGTTGTGTTTATTGGTGGCGAAAACTTTAT 21783 29 100.0 32 ............................. ATTCGTTCTTTTGACGGCAATAACGGAACCGT 21844 29 100.0 32 ............................. CACATCGCGGCGCAGAGCGCTTTCTACTTTCA 21905 29 100.0 33 ............................. GATACCAAAGCACCTAAACGCCTACTAATTGCT 21967 29 100.0 32 ............................. GCACTAGAAGACGTTAGAAAGGAAATCTCCAT 22028 29 100.0 32 ............................. AGTTGGCCACGGAAATGGAGCACGTTGGTTTA 22089 29 100.0 32 ............................. TACACAACTGAGTACATGGATTTTCTGTACTC 22150 29 100.0 33 ............................. GATGGTATGTGGTATCTGCCGCTAGTGAAGGGA 22212 29 100.0 32 ............................. CCATGGATGGCGCGTACTTGTTTAAGCTTGAC 22273 29 100.0 32 ............................. ATCCAAATGAACAAAGGAGTCCCTCAGATTGA 22334 28 75.9 0 .......T.-.CG...A...A.......A | G [22350] ========== ====== ====== ====== ============================= ================================= ================== 72 29 99.6 32 GCGTTCCCCGAGCACTCGGGGATTAACCG # Left flank : CGATAGCGGCCATCGCAGCCATTAGAGGAGATTTGCAATGAGTATGTTGGTAGTAGTAACAGAAAGTGTGCCAGATAGATTAAGAGGGCGTTTAGCTATTTGGTTACTCGAGATTCGAGCGGGCGTTTATATTGGTGATACGTCACGCAAAATACGTGAAATGATCTGGGAGCAAGTCAACGCCTTAGCCGAACAAGGGAATGTTGTGATGGCTTGGTCGACCAATTCAGAATCGGGTTTTGAATTCCAAACTTATGGTGAAAACCGCCGTATACCGGTGGATTTAGATGGACTTCGACTGGTGTCATTTTTACCTCAAAAATAGCTAACTTAATGATTTTTATGGACTTTCGGTGGAATTTGTTTGTTTGAAGCTCCTTTCGGTTAAGTTCTTTAAAATCAAAAGGTTATAGATCTTTAAAAACTTAAAAAGAACACTAAATCTTGGTGGATTTCTTTGTAAGGCATTTTCCTCTATAAAACAATAATCTACACTAAGA # Right flank : AAGACCGTTGTCGGGTTCAGTCATCACACCTAGGTGTTCCCCACGACAGTGTGGGGCTATAGTATCTGCAGAACTAGGCCTATATATTCAGCTTAATATCAATTATTTCTTATCGCTGCTAACATCCGACCCTTGTTTGAATGGATTTAGCGTGACTTATGATTCGATTACACTGCACTAATAAACTGCTCCCGAAGCTGCCGACCAACGCTAATGGGCGTTTGCCGAGTTCGGCGTCACAGGTCATCCCTGGGCTAGAAGCGTTGAACCCCCTAAGTGGCTGGCACGGCAGTTTGTTTTTGGTTAAGGGGCGCAACTGTGTGATTTGCGTCCACGAAGCAACACGCCTAGCCATTTACATCCCCTGTCTGAATAAAGCCGATTTCGCTGATTTGGACCGCTTGTTTGCTCAGGCGCTACTGCAATCCCTAGAGGCCATCCAAGCCACTGAAGAGCAGATCAATACTGCTAAGCAGCTGCTTCAGCCGTTAGTGATTGAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGAGCACTCGGGGATTAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //