Array 1 15391-13970 **** Predicted by CRISPRDetect 2.4 *** >NZ_CUFU01000032.1 Staphylococcus haemolyticus strain W_139, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 15390 33 100.0 34 ................................. GACTAATTCCAACTTAACAACCAATCCAAATCAT 15323 33 100.0 32 ................................. GACACAAGCAGAAAGTGTTTGTTAAAGGCTCA 15258 33 100.0 33 ................................. GACATGATTTCAAAGAGGAGAACTTACAAGATT 15192 33 100.0 33 ................................. GACTCAACACCGCCTTATTGTTTAGCAGCGATA 15126 33 100.0 35 ................................. GACTGACTTTAGCGAAGAACTACAACCTAGTGGCA 15058 33 100.0 33 ................................. GACAAGAAAATAAAGATACTGTAAGTGCTGAGG 14992 33 100.0 33 ................................. GACCTTACCGTAAATAGATTCTTTTTGTTCATC 14926 33 100.0 33 ................................. GACAATCACTACCCAAGTCAATGATATCTTCTT 14860 33 97.0 34 .......................A......... GACTAACGTTGTGATGAACTATTCCATATAGATG 14793 33 100.0 34 ................................. GACTATCATCTTTGCGTCGTGTATCACCAAACAT 14726 33 100.0 33 ................................. GACATACGTTCATCAACTAAAAATACACGGTCG 14660 33 100.0 33 ................................. GACATAATTTTTATTTTGTCTTTGTACATGTTT 14594 33 100.0 32 ................................. GACAAAGACCAAAATATGTATGGTGACGGATT 14529 33 100.0 33 ................................. GACTTAGTATTAGCAATTTTGCTTCGTTGTACA 14463 33 100.0 33 ................................. GACAGTGACACTGGACAACCAAGTAAACCTGCC 14397 33 100.0 32 ................................. GACAATGCTAGGTACAATTAATAATGCTCTTA 14332 33 100.0 33 ................................. GACTAGAGTAGGGTATTTATTTTATCCGAAGTG 14266 33 100.0 33 ................................. GACTAAATTCGCTAGTCCATAGTGAAATTAGAA 14200 33 100.0 34 ................................. GACAAAGACATATTAGATAGTAAAGGAATAAGGG 14133 33 100.0 32 ................................. GACAATTTTATATCCAAAATCATGGATAATCG 14068 33 100.0 33 ................................. TATCTTTTTTAGGTCGGCTTTTTATTTTGAATA 14002 33 97.0 0 .......................A......... | ========== ====== ====== ====== ================================= =================================== ================== 22 33 99.7 33 GTTTTAGTACTCTGTAATTTTAGGTATGAGGTA # Left flank : ATTATCAAGTAAAAGAAAAAGCATTTGTAATCTATTTATATCCAGAAGCTGGCCTAAGCATTAAAGAACAAATAAGATTTAGAAAAATACTAAATAACTTACCTGTTCCGGTCATTGTTTTAACCGAATCACCACGTTTTTTATCTGAAAGTATTAAAGGACTAAATTATTTTATTAATAATGTTCAAATGATCACAGAATCTTTTTTTGAAGATAGCTATTGGAATGCACCAATTAATGTAGAAAAAGAACAGATTGAAGAGAGGTTTGAATATTTATTTGTAAAATATTGTTCAGTTTTAGAAATAAAACCGATTATTTCTAACTATTTACTTGCGGATATCATTGTTTTTAATGATATTGATCTTTATATCCTTGTTTCATTTTTGAAACACTGTAATTTAGAGTATAAATTAGATATCGATAAAACAAAAATTTCATTAGCATTATCGTCATATCTATTTTCTTAATTATTTTGAGGATTTATAATGATGCTAGAG # Right flank : TATAGCAAAATCACTGATAGGGAGAAGCATATCATAAATGATGCGGTTTTTAATTATTACATTACACGGGTAGATAATATAATAGCTCTATTTGTAATGATAAATTTAATTACATACCTTAAAGTTATAATAGTCAATTTAAATTATTTAAACAATCAGTGAGTTACTATTACTAATGTGATAACAATAAATAAGTAATAATCAAAAATATTAGTAGATTAATTTTATTTACTATATTAATGTATAATTTTAGTGAAAATAAATATAAAAAACATTGCAAATTACATTATAATAAAAATAAATATAAAAAAGAAAGTGTTATATTGTAATGAAGATAAATATTTTAGGCTATAATATTTTTTCAAAAGGCGGTACATCAAGAAGTAATATTAATTTAATAAAATCATTATTAAGTATCGGAGTAGAGGTGCATTATTTTAATTATTTAGATTTTAATAAAAACGATATATTAAAGCTAATAATTCATGAAGAATTAAACA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATGAGGTA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGTACTCTGTAATTTTAGGTATGAGGTA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.10,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //