Array 1 4305-4144 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSRS01000011.1 Sporotomaculum syntrophicum strain FB SPSYN_contig000011, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 4304 29 100.0 38 ............................. TAGAATACGCTGCCTCAGCTATACGGCTGGGGCTTTGT 4237 29 100.0 36 ............................. TTCTTTTGCACCCTCAATATCGCCTCTACCTGCTAA 4172 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 3 29 100.0 38 GTTTTATCTGAACGTAGTGGGATTTAAAG # Left flank : TTTGATTGGCGATGAAGTGTATAAACCGTTTAAAGCGTGGTGGTAATGTGTTTGTTATTATTACTTATGATGTCGGCGAGAAGAGGGTTGGAAAGGTGTGTAAAAAACTGAGAGAGTACCTGGACTGGACGCAAAACTCTGTATTTGAGGGGCAAATCCAGAAAGGAAAGCTTACCAAATGTTTAAGCGAATTGAAAAAGATCCTAACTGAAGAAGACTCGATTTATATTTACCGAATCGAAAATCCCAACCATCTGAGAAAGGATGTAATTGGGCAGAACAGGTCTTTTGACCGTATATTTCTCTAGTAGGCTACTTTGGTGCATTATGGAATTTTTAAGATAAATGCTGGTAACCCTTGAGTTGTATGACATGGCAGGGTTTGTGAAAAGAAGTTATAACTCCTTATTAATGGTTCGATGCAAATTTAACTTGCCAGCTATTCGAGAATGTTTTTTAACCTTGAATAATCAAGGGTTTTTTGATATTTTGAAATTGGG # Right flank : CNNGGCCTGCTATACAAGCTGCTTTAAATCCCACTACGTTCAGATAAAACAGCGGCTAACGAAACGGCAAAAGTGGGACAAGTTGTCTTTAAATCNNNNNNNNNNNNNNNNNNNNNNNNNTCTACTCGACTTTTGTGTCAGATAAAAGAACACATATACATTGCATAAGGCTTAGTTTTTGACACAAAGGAACCGTCCCCTTGTGTCCCCCAAGAGAACAGTGCGCTGCTATGTGGCCAAATTGCGCCCCCCTGCAATCATTCAACATATCTACCTTTATTGATTATTTCATCATGTAGAAACTGGCCCGGTCTAACTTTTTTATATTCTTCAGTAGAATATGGTCTGGGTGAAATATCTAAGTCTACGGATTCACTAATTCTTTTTAACATGACGGCTTCTTCCAAGTAATCATGGCCAAAATCAGGTGAAATTATTGCAATGTCAATATCACTATCCTTGTTCCCTTGGCCGCGAGCATAAGAACCAAAAAGTATAGC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 76843-79540 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSRS01000001.1 Sporotomaculum syntrophicum strain FB SPSYN_contig000001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 76843 29 100.0 36 ............................. TGTATTCATCCAAACGCGCTAATGCGTCCATGATAA 76908 29 100.0 37 ............................. TGAAAAGCTTTGTAATCCTCCCGGCTAAATAAGTCCA 76974 29 100.0 36 ............................. ATAGTTATTGCCGGCGCTTAAACCGGATAAATTAAC 77039 29 100.0 36 ............................. ACCCTTATCATTTGATTTTTGTTGTCGATTACGCTA 77104 29 100.0 36 ............................. GCAGCATGTGCTCGTGCCTTGCTAGGGTTTCACCTT 77169 29 100.0 36 ............................. ACAGTCGGCCGCCGTAGTCTATCTTATATAGCCAGT 77234 29 100.0 36 ............................. ATGTTATATTGGTGGCTGATGGGGACAAATTGCCCG 77299 29 100.0 37 ............................. AATAATACCTTTGTCAACATGTCAACAACGGTGTCAA 77365 29 100.0 37 ............................. CAATCATCTAAAGCTAGTCTTAGGGAATGAAGTTCTT 77431 29 100.0 35 ............................. TAGTGGAGGACAGGCTATTACAAGCACTGGCCATC 77495 29 100.0 36 ............................. ATCCCTGGGGCGCTCCAAGCCCTTGAACAAGTCATC 77560 29 100.0 36 ............................. GCGTTTAATCAGGAATTATGAAAATGACTTTAAGGA 77625 29 100.0 37 ............................. CTACTACTAAGATCATCCCGTAGACAAAGACCGCCAC 77691 29 100.0 36 ............................. CAATACAGAGCACCGTTGAACAGCAGATTGAGCAGG 77756 29 100.0 36 ............................. TTTGACAACCGTTTGATGATCAGTGACCGGAGAATT 77821 29 100.0 36 ............................. AAATTTAAAACTAGAAAGTCTTTCTTCTTTGTAAAG 77886 29 100.0 36 ............................. GAAGTTCAGATAAAATTAACAGTCAGGATAATGTAA 77951 29 100.0 35 ............................. AGGGGAAAGCCATTGGCAAACTGGTTGCGAAACAT 78015 29 100.0 35 ............................. CAATGATGGGATTCTTAAAGCCGAATTCCTGAATA 78079 29 100.0 36 ............................. ATGTTACGGTAAAAACATCGTCGCCCACAATCTCAA 78144 29 100.0 36 ............................. ATAGCTGCGGCCATAGCAGCAATAACGCTGATAGTC 78209 29 100.0 36 ............................. AGGTCAAAGAAGTGGAAGCTCTGGATGCTCAGTTCG 78274 29 100.0 35 ............................. CAACCTCCCTCTTTGTTTTTTCTTAGCTATTTATA 78338 29 100.0 36 ............................. CTGGATCCTAAGTCCAGTGAATTGAAAGAACGCAAC 78403 29 100.0 36 ............................. TTACTTATTCCCGCCTTTCTCTTTTAATACCTCTAC 78468 29 100.0 37 ............................. TCACAAGCAACAATATTACCAGCCGCGTACTTTTCCG 78534 29 100.0 35 ............................. CGGTCTACCCTCCAAAATATATCAGTACATTCCAC 78598 29 100.0 38 ............................. TAAACAACCTGGTCTTTATTGCCTCCCTCGATAATCCG 78665 29 100.0 37 ............................. AGAGTTTGATTTTGATGATATGCTAGAGTTTTTTATT 78731 29 100.0 35 ............................. ACGAGTATATTGCGCTGGAATTTTGGTGGCCGGTC 78795 29 100.0 37 ............................. AAAACAAAAACTCCTAGCCGAATCGGTCGAGAATATG 78861 29 100.0 35 ............................. ACGCTTTGTCAAGCTCGATTTCAACCGTACGATAG 78925 29 100.0 36 ............................. ATTTGCGCGTTGTCACTTTTAAGCACTCTTTAGATT 78990 29 100.0 36 ............................. CAATATCGTCACAAATGAATATAAAGCAGTTGGCAA 79055 29 100.0 36 ............................. AGTAATTGACTTTGTTGCAAGTTCAATATCTTGTTG 79120 29 100.0 36 ............................. TGTAATCAAGCCTCCTTTATTTCACCGCAAAACGTC 79185 29 100.0 36 ............................. GTAGTAATTACGCCGTTCCCAATTTGATAACAATTT 79250 29 100.0 37 ............................. ATGGCAGTGCCCATAACACCAGCTACCGCCGCAATTG 79316 29 100.0 37 ............................. ATACCACTTTTGGCTAAGTTAATTAATGATGGTTTGC 79382 29 100.0 35 ............................. ATATCATCTTCGGTGTATGTCTGGCTAACTAGGGT 79446 29 100.0 37 ............................. AGGAAAAGGCAATCAAAGAGTGTAAAGAGGCCGCAGC 79512 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 42 29 100.0 36 GTTTTATCTGAACGTAGTGGGATTTAAAG # Left flank : CTTCTGTTTGCAACCAATTATTACATTCATTTTCTAAATAAAACATCCATGCATTTGGAACTGGAGCATTTATTGATTTTAATAAATATGTTTCCGCGATTTTATCATCAAAATGCCACGAAGTATTTAAATCAGGGAATACTAATAAACCTAAATTTTTTGCGATATTTAATATACTTCTTGCAAATAACATATCCTGCAACACATAATTAGAAAAATGCCAAACTAAGCAATCATACTTTTTTAACTCTGCAATTATATTTGGTTGATAACAATCAACAATACCATAATTCAAATGATTGTTTTTACAATATTCAATCCATGAGCTTGTCCATAGTGTAGAATGTGAAAAAATATTATCGTTTTCATGAATTGCAATTCGTAAACTACTTTTCATTTCTAATTCCCCTTATCCATACAAAGTAAATAATTATATCCCAACTTTTCTTTGTCTCATTTCTAATATTTTATTAATCTCCTCCATATAGCTATCAATTACT # Right flank : GNNNGGCCTGCTATACAAGCTGCTTTAAATCCCACTACGTTCAGATAAAACAGCGGCTAACGAAACGGCAAAAGTGGGACAAGTTGTCTTTAAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTACTATTTGACGGTCAAATTCACGTTCTACCTTAGCTCGTCCCGCTATTCCCATTTGTTTTTTGTTTTCATATAGCAATTTGATGAATTTTTCCATTGTATTAACTAGAGCCGATGTATTCCTAACCTCAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 1 704442-699301 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSRS01000003.1 Sporotomaculum syntrophicum strain FB SPSYN_contig000003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 704441 28 96.4 34 ...........................T TAAACTAAAGCTATCTTTATCTTCAATAAATTGG 704379 28 96.4 33 ...........................T GGTGATTTTTTTACTTGGCATCTACTAATAAGT 704318 28 100.0 33 ............................ TGGTACTTTTAGAAGATTATTATATAAAAAAGA 704257 28 100.0 33 ............................ CTATCGGCAATACTTGCGAACACTGTAATACTA 704196 28 100.0 34 ............................ CAACATGGCATCCATTTTATCACGTACCTGGTTA 704134 28 100.0 33 ............................ TATACCAAAATTCATTCGGATAGTAAACTTTGT 704073 28 100.0 33 ............................ TACCTAAAGCATAAGCAACTAAACTATTGCAAA 704012 28 100.0 33 ............................ TAGGATTATCATTATCTACAATTAAATATTTAT 703951 28 100.0 18 ............................ NNNNNNNNNNNNNNNNNN Deletion [703906] 703905 28 57.1 33 NNNNNNNNNNNN................ TATATTGATAATTATACCAGCACATAACAGTGC 703844 28 100.0 33 ............................ TACATCCAATGTGAAGGTTCCACTAAATGTACT 703783 28 100.0 33 ............................ CTAATACAAAAACAATACCCAGAAATATTTAAA 703722 28 100.0 33 ............................ CCATATCGGATACCACCTACCCGGAACGATACA 703661 28 100.0 33 ............................ TAATTTACTTTTACGTGCCCGGGAAGCAGGTTA 703600 28 100.0 33 ............................ CCTTCTTCTTTATTAAGTTCTTCACAAGCTAAC 703539 28 100.0 33 ............................ TTATTTTGTGGTGATTGTGTAAAAGTAATGCAG 703478 28 100.0 33 ............................ CAAATTTTAGGAAGTATTAAAATATGGATTTTT 703417 28 100.0 35 ............................ TAGGGCGCTCCAATACTCTGGGACTTTGGGCAAGT 703354 28 96.4 33 ........T................... TATATTCAGCCAGGTCAGCTTCATTATAATCAA 703293 28 100.0 33 ............................ CCAGTGAAAAAGAATTTTGTTACCGTGAGCAGG 703232 28 100.0 33 ............................ GAAAATATGGTTGTTTTAGACCCTTTTGTTGGC 703171 28 100.0 33 ............................ TAAACTATGTTAACCCGTTCACGTTTACTAGCT 703110 28 100.0 33 ............................ CAAGCTATGCGTCCAGGCCCAACGTAGGGCTTC 703049 28 100.0 33 ............................ TAGCGTACTTTGCCATATAACTTACTAAAATGC 702988 28 100.0 33 ............................ CCAATTAGCAAACAGCGGTAATAGCAAAGGTAA 702927 28 100.0 33 ............................ CTTGAAAGAAGAACTCAAATTCCTTAGTATTAA 702866 28 100.0 33 ............................ CCCAATGGGTGAGGCCGAACTGCCTATGTTTTT 702805 28 100.0 33 ............................ CCACCAATTGTCCCGAACGCGAATATATGCGTA 702744 28 100.0 33 ............................ CAGATCACCACATTTTTATTATTATCTCTTTAT 702683 28 100.0 33 ............................ CAAGACACCGAGGAAAAGTGGTTAAATGAAATA 702622 28 100.0 33 ............................ CAAGTTGTTAACGGTTTTTTATTTGTCTATACA 702561 28 100.0 34 ............................ TGTTCTACTACATTACCAGATATAAACGGTATAT 702499 28 100.0 33 ............................ TGCTGGCACACTATCAATAACTATCAAAGGTAT 702438 28 100.0 33 ............................ CATTAAGTGATAGAGGTTATAATAAAGAGTTCG 702377 28 100.0 33 ............................ TGGCTTCTAGTACCTACAACTTGCCCTTTTTCA 702316 28 100.0 33 ............................ CTTTATAAGTTAGGTGATAAATATATGAATAAT 702255 28 100.0 33 ............................ TGCGATTCCTTTGCTCATATCATCATTAAATTG 702194 28 100.0 33 ............................ GGTATAAGTCCACCCCCGGCCTAGTTTATAAAA 702133 28 100.0 33 ............................ TTTTACAACTAAAATTAAAACAGATAAAAAAGG 702072 28 100.0 33 ............................ CCAATTCAATACCAGGACACCGGCAACAGATCA 702011 28 100.0 33 ............................ CATTATAAAAGCTAATTTAAAAATACACATTGA 701950 28 100.0 33 ............................ CCCATCATATTAGGCCAAACTATTTACACTTAT 701889 28 100.0 33 ............................ TGTTATCGGCGTTATCCATGCGCTCAGACATTT 701828 28 100.0 33 ............................ TATTTCATCTCCTGCATTTTGTTCATCAATAGA 701767 28 100.0 33 ............................ TGGTATGAGCGAAACGGAATTAAATGATTTATT 701706 28 100.0 33 ............................ TCTATTCCAATTCCTTCATTTAATGGCATATCA 701645 28 100.0 33 ............................ TGTCAATGGTGTCTTGAATTTCCTCGGCAGTGT 701584 28 100.0 33 ............................ CGATATACGGCGGCTCTGGAGGCGTTTTGAAAT 701523 28 100.0 33 ............................ TCTGATAAGACGCAGCTAGAGGGTAAGCTTAAG 701462 28 100.0 33 ............................ CTATGTAGAATCTGCCATAAAACAGTGGCTAAA 701401 28 100.0 33 ............................ CAGATAAGGAAAGTATTCTTAAACAAAATACAG 701340 28 100.0 33 ............................ TTTGATAACCTGCTTCCCGGGCACGTAAAAGTA 701279 28 100.0 30 ............................ TGCCAACAGGAAGAAGAAACAGAAGAAGAT 701221 28 100.0 33 ............................ TAGGTGGGTTAAATTTAACGTTCCATCGCTGAG 701160 28 100.0 33 ............................ TTAGATGTTGGTGATAGAATATATTTTGTTAAA 701099 28 100.0 33 ............................ TGCCTTGCCTGTGCATATTGTTTCCCAATTTCC 701038 28 100.0 33 ............................ CTGCCCAGGGGTGACGGTGACTCGGCTGTTATA 700977 28 100.0 33 ............................ TATGGTCGTAAACATAATGCAATGCTTATTATT 700916 28 100.0 34 ............................ TCTTGTGCATTTATTATACTTGTATTTTCATAAA 700854 28 100.0 33 ............................ TATGTAATTGGGAAGGATATTGTTTATATTCTT 700793 28 100.0 33 ............................ TGTATCTTATGCACCGGTGCGTTATTTGGCAGA 700732 28 100.0 33 ............................ TCGAAGCCACCGTCCGACCGGAGAACCCGGTCA 700671 28 100.0 33 ............................ CTGTAAGAAATGCTATTTGGGATTCAGATTTTT 700610 28 100.0 33 ............................ TTTGGCATGTACTCATCTCCTTTGAGTACATTT 700549 28 100.0 33 ............................ CAGAGTATTCACTTCATGACTTTGTTAAACCAA 700488 28 100.0 33 ............................ CGATCCTTTGCATTATCAGAATAACCTGCACCG 700427 28 100.0 33 ............................ TATTATCAAAAACATTAACTATTGGTTCATACC 700366 28 100.0 33 ............................ TAGGACTGCTGCCGGCACAGAGACGTACCACTA 700305 28 100.0 33 ............................ CTTATCGTTAAGCAATTTGGATCGGGTTAAAAA 700244 28 100.0 33 ............................ CCATCCTAGCCTCGATATAAGAGACTGAACTTC 700183 28 100.0 33 ............................ TGTCCAGAAAGATATCGCTAGCGCTCATGTTTT 700122 28 100.0 33 ............................ TAGATAAAAACGTACCACTACTCTCCAGTTCAA 700061 28 100.0 33 ............................ CGCCCGTCGCCAGCAAAACATTATCGCCATGCG 700000 28 100.0 33 ............................ TTTATTGCCGCGTATGATTTTAATAGATTTTTG 699939 28 100.0 34 ............................ CCGGACCACGTTGCTAACGTGATGTTCTGGTGCC 699877 28 100.0 33 ............................ TATACGCTTGATAATCGTAATTTGGGAATTGAC 699816 28 100.0 33 ............................ CTAAGCCGCTAAAACGCGGTAGCAAGACTATTG 699755 28 100.0 33 ............................ CGCATACCCAGAAGAATTGCATCTGGCCGCCCT 699694 28 100.0 33 ............................ CAATGGTTCCAACTTCAGCCAAAGCAAATGTAT 699633 28 100.0 33 ............................ CAGTAAAGGAAATTTTATTAAATAGCAGTAAAG 699572 28 100.0 33 ............................ TGGTAGGCTGCCCAAAAGAGTATGAGGGATGGA 699511 28 100.0 33 ............................ CAGCCGACGCCGGCGCTGGCCGACCAATAATAA 699450 28 100.0 33 ............................ CGACTGAAGCGGCCATTTATGTTTGTACTTGAC 699389 28 100.0 33 ............................ TTTGGCTATGTGATTTGAAAAGTGGAGATCAAG 699328 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ =================================== ================== 85 28 99.4 33 GTGCTCCCCGCGCGTGCGGGGATGATCC # Left flank : AACGGGCATTACCGGCCAATTGATTGAAAAAGAGGGCCTAGAACCGGTAATGGCTTTAAAATCTTTTATTGAGTTTATCGGAGTGTATCCATTGGTAGCCCACAATATGTCCTTTGATATGGGCTTTTTAAATGCTGCGTGTGCCAAACACGGAGTTGGATTGATAGCCAACGAGCTGATTGATACGCTGGAGTTATCGAAAAAATATGTTCTGGGTGTAAAAAACTATTCGTTAAAAAACTTAGCTGAAAAATTTCAGATAGAAACAAACACATCTCATCGAAGTCTGGCGGATTGTTTGACAATTCATATGTTGTACGAGAAACTGATAAAAATTGTATAAGCTAACAATAAATATCAACGCTGAGCAGGCCAAAAAATTCCCTTAACGTGGTTGGTCATCATGAAAACAATGCTCAATTTACTGCACATGAAACTAATAAAAATGATATACTTTGGTTTGAAGGAATGCCCGTTTTATAAGGGATTCCTTAGTGTGT # Right flank : CCACCCAGGAGTAATACAGGAACAAAAAGAAAGGTGCTCCCCGCGCGTGNNCGTGCGGGGATGATCCTATAATTGGGTTTAACGGGTATGCATGTCTGACTGTGTGCCCCTTATACAACTAAGTCCAGCCGGACGGGTCGATTAAAGTTGCCATCATTGATCTTTTTTACAGCGGGCAAATTCGGTTGTTCATCGGAGAGGGGAAACTTTGATGATTAGTTGATCTCTACTTCAATTTCCACGGCTATTGGGACAACTTCCATTAAAGATATAGTTACCGGAGATGGTTTCCCTTACGGCTATAAAAAAATTAACACAACCCTAATAGAAGATTACCGGCTTATTATAAACAATAAGAAAACATATAGGCTCTGTAAAGAACTTAATGTATTGCGTCCCCGGAGAAAGATATATCCAAACCGACCGAGAAAGCCGGTAAAGCGAGATAAAGTAGTTGCCCCAAACCGACACTGGTAAATGGATTTAAAGTATGGTTATAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGTGCGGGGATGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGTGCGGGGATGAGCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 138024-137019 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSRS01000005.1 Sporotomaculum syntrophicum strain FB SPSYN_contig000005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 138023 29 100.0 36 ............................. TAACTTATTCCCATTCGTGGTGATCCGCGCATACTG 137958 29 100.0 36 ............................. CAGTTCATTCGATTTTTTCATCCAGTTTTATACCGG 137893 29 100.0 38 ............................. AGAAATTGCCGACACAGAAAATGCCAAAAAATATTTTT 137826 29 100.0 36 ............................. AAGCCATAGCTGATAAAGGATTTATCACGCGGTATG 137761 29 100.0 37 ............................. CTCATGATTTTTGTGCCAATGAAGTTGTTGTATTCCT 137695 29 100.0 36 ............................. GCCCTGTATGTTCATTAACATACGTTCTAGTCACAT 137630 29 100.0 36 ............................. CAGGTAGTACACCTACAATAGATAGATGGAAACTGA 137565 29 100.0 36 ............................. TTACCGGTGCTGAATTAACCATACCTGAAGTAATGT 137500 29 100.0 35 ............................. CAAGAAGCCGAAGCGGCGATGCTGCTCTTTAAACT 137436 29 100.0 37 ............................. TTTATCCGGTTTAACCGCCACCGCCGGCAATAACTAT 137370 29 100.0 36 ............................. TGTGACCGCAGAAAATCAGGACTTTATCATGTATAT 137305 29 100.0 35 ............................. GGAGGGGGAGGATGTGAACAAGCAAGAGCAGCTCA 137241 29 100.0 36 ............................. TCTCATACCCAACGGCCCCGGCTGCAGCCAGGAACT 137176 29 100.0 36 ............................. CCTCAGCAAATCCAGGCCTAAACGCTGCGCTAACAT 137111 29 100.0 35 ............................. CGTCCAAGTATCTGTTATATATAAGTTTTTTCTTT 137047 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 16 29 100.0 36 CTTTAAATCCCACTACGTTCAGATAAAAC # Left flank : GGCTCAAGCAACGCTATGATCTCCTATCAAAATAAAATTAGCAGAAAATTAGGTAGGTATAAGTAAATTGTATATTAGATGCGCATAACAACAGTAACCCCAAAAACCTTGGAGTTGTCTTCATTCTTTCGTTTAGCTTTTAAGGGCTTTGGCTAATTCCTCTATTTCCTTTTTTGCCAAATCTTCTTGGCCGGCCAGCGACTCCAGGTGGTGTTGTATTTCATGCAGCACCGTATCTATAATCTCCGCTTTCCAGCAGTCAACAGACTCGTCTTCTAGCAATGCCACAAATGAACCATAATAAAACACGATAAAGCAACCCAGCATACTATCCTCAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATCTTTAAATCCAACTACGTTCAGATAATACTTAAAGCCGATCCCACATATCAGATTTACCATATAT # Right flank : TTATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATAAAACTTAAAAATAAGAGGATAAATTAGGAGGTAATAAAAAACTTTAAATCCCACTACGTTCAGATAAAACGCTCCGGCAGATCCTGCGTCTCCATCGTCAATAGCAACTTTAAATCCCACTACGTTCAGATAAAACGATTTAGTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAAATCCCACTACGTTCAGATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [10.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 34176-34986 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSRS01000004.1 Sporotomaculum syntrophicum strain FB SPSYN_contig000004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 34176 29 100.0 36 ............................. TGATAGTATGTTTAAGCCCATTGAACGTAATTATGA 34241 29 100.0 36 ............................. ATATCATGCCATTACTTAAATCAAATACGCATAATT 34306 29 100.0 36 ............................. GCGGAAGTGCTTTAAAAAGGCTCATGCTTGCACCAT 34371 29 100.0 38 ............................. GCTAAATTAGCGAGTAGTTTGCTTTTCCCCGCCCTATT 34438 29 100.0 36 ............................. CGGTTACATCACATTCCCAAAGCCAATCTCCGATGT 34503 29 100.0 36 ............................. AGCCCTGCAGGAAGGCTTATGTAATATCAAAGGTGT 34568 29 100.0 35 ............................. ACAGTCGCCTTCTTCGAATATGCGTTTTAAACCGA 34632 29 100.0 37 ............................. AAAGCCCGCATGCTGATAAAGACTATATAGTAGCTGA 34698 29 100.0 36 ............................. TAAAAGAACACACGTTCAGACTCACCCAAAAGATTT 34763 29 100.0 37 ............................. ATATCAGGATTTTCAGGATAACCATTTTTTATACTTG 34829 29 100.0 36 ............................. TGACATTTACACCATTCCTTTCAAGGATTTTTGCGG 34894 29 100.0 35 ............................. CCGGCCATTAAGCGGAGCGATTGCCGCCCACACAG 34958 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 13 29 100.0 36 CTTTAAATCCCACTACGTTCAGATAAAAC # Left flank : CAGAAAACTAGGGGGCTCGACTTATTTTAGCGCAGGTCACAACACCCACTAAACATAAATAGTTATAGTATATTAAAGAGTTGATTGTACTAAAAAGTTATCCAACCTTGCTTATCGGAATAGTATTCAGAGGTGAGCTTATTGTCTAATAAAAACGAAAACACAAAAATTCCGGAGAACGACATTCAGCAAAAATGCTCTTGTATGTACACTTTCCTCAAAGGCCAAATTTCCTATCGTAGCATTGCGGAGGGTTACATAAGATGAACAAATCATCTACTCTCGGAATGTTTTTGGCAGAATACCCCAGAGCAGCATACTTCCGGGGACTTGAAGACCTATACCGGGATTTCAATTAATGGTGGAATAAACGAATTCCTGTAAAGCACATGGCCATACCATATTTGTTACATGTTTCAATAACATGATCATCACGAATCGATCCACCTGGCTCGGCAATATATTTAACACCGCTTTTATGGGCACGTTCAATATTGTCN # Right flank : CGATTCACCGAGGCCGCTTGCCGCATTGAATAGTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAAATCCCACTACGTTCAGATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 2 86867-87031 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSRS01000004.1 Sporotomaculum syntrophicum strain FB SPSYN_contig000004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ================================= ================== 86867 34 100.0 33 .................................. TGGCTCATTTTGAGCTTTCGGTTCAACTGCTTG 86934 34 100.0 30 .................................. CAGAAATTAAGCAAAATTTTGCTGAATTTA 86998 34 100.0 0 .................................. | ========== ====== ====== ====== ================================== ================================= ================== 3 34 100.0 32 GTTGCAATACGCGCACGCGCGCGAGGGGAGCCGA # Left flank : CAAATCTTATTTAAAACTGTCGCATAGTCCTTAACCTGCTCCCTACTCCACCCAATCCGCTCACCAATCTGCGCCTGGGATGCGGAATTTTCCGCATCCAGGTTCAGCTTCGCACAGCTTCTCACGAGCTTCTCACGTTACGATTCCACACTTTCGGCCTGATATGAGCCCAAAAGTTTAGGCAGTGATTTACTGACTTTATGCGTTTAAAACGCAGAAAGTTTATGGATTTTAAATCCCGAAAGGTTTAGCGATTTGAAATAGATAAATTATAACTCACCCCACTTGTGGGGGGGCAGTGTCTCCCCGAGGGGGTAACAATCTGTTCCATCCTTGTTGGTGGCGCTACCTACCAACTTGGTAACTACTTCACGTCAGTAGCCGACAGTTTGTCGGTAACTGAAAACTCAGCCGACTTCCCGGCCCAGCTCACCCGGTTATTTTTCCGAGTGAGTTTTATTTATTGATGGCGGTAAATGTCCAAGCGCTTGGACATTTGA # Right flank : ACAGAAAATCAAAGGACAAAATTTTGTCTCTTGAAACTCAACCGCAAGGCAGATAACCCCCGGGTGTAAAGTTTCTCGCCAAAATTGGAGCGAAAACGGCCTCCATATTTGCCGTAAAAAAGGTGGTGGGGCAAAAATTTAAGCGGGATCACTCCCGCTCTCCTCAATAAGGGTCCTTTATAACCTTAAATAAATCCTTCATCCAAGGCCATTCACCTTGATGTATTTTTAATGCCACCTCTACCGATGTATCGCTCCGCTGTAGTAGCTTTATTAATTCATCTTGGGTTACCTCGGCTTTTACTGTTTCTGTCTCATAGAAATAGTCTTGTTTTAAATAGGTGACTTTGTATATTGCCACTCCCTAACCCCCCCCCTTTGGTTTCCCCCCGGGTGAGCATCATCTATTTAAAAAAACGCCGTTGTTAGCTTAATCCAGTTGGTGCCATCGTATATAAAAACGTCCTGTGTGTCGGTTTCCAGGAACCTGCTGCCGGGCA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAATACGCGCACGCGCGCGAGGGGAGCCGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.60,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA // Array 1 1753-28 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSRS01000010.1 Sporotomaculum syntrophicum strain FB SPSYN_contig000010, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 1752 29 100.0 36 ............................. TTAGCAAATGTTCCCTGGAAGCGGTATAGCAATCCG 1687 29 100.0 38 ............................. GATAAGTTTGATAGTACAGACCGGGCCAGAGAAGGCAT 1620 29 100.0 36 ............................. TCGAGCTTTAAGCCAGGCGATAAGGTGCGGATACTG 1555 29 100.0 37 ............................. GAGGGGGAGGCGGATGTGAATAAAGAGGAGCAGCTTA 1489 29 100.0 35 ............................. CGGGCAGGGCAGCTCTATTACTTTACGTTGTTTTA 1425 29 100.0 35 ............................. TAAAAAGCCCGTCTAATATGGACGAGCTTTTTTGT 1361 29 100.0 37 ............................. GTCCTCCTCTTTTGCTCGTCGTCGCTATCCCGCATAA 1295 29 100.0 36 ............................. ATGTATTTGCACTATTTGCCCAGGTCGCCAGGGTAA 1230 29 100.0 37 ............................. TAGAAATTGAAAATTTGAATAATGCTGGTTGTAACAA 1164 29 100.0 36 ............................. AATACCTAAAGAGGCCAATAAATCTTTTTGTTCTTT 1099 29 100.0 37 ............................. GAGATTCGAGGTCCTCTGCCATTGTAATTACGTCCAT 1033 29 100.0 37 ............................. GTATATCTTTACGCAAGGTTTCCAGCGTGGCCACTAT 967 29 100.0 36 ............................. AACAAACGCAACTTATGTAACAATAATACATTTATA 902 29 100.0 36 ............................. GTTAAGCATACTCAGGTTAATTTTGGTCGTTGCTGT 837 29 100.0 36 ............................. AACAATTCATCCGATTTTCATTCAGTTTTATGCCGG 772 29 100.0 35 ............................. TAAAATGTGTTAACCCGACAACGACATTATTACCC 708 29 100.0 37 ............................. TCGGGCAATTTGTCCCCATCAGCCACCAATATAACAT 642 29 100.0 35 ............................. ACAACTACCAATCATAACAACTGAATCCTGCCTAA 578 29 100.0 37 ............................. TATCAATATGGTCACTTTAAGATGGGTTCCCAAGCCA 512 29 100.0 37 ............................. TTATTCGCTGTCACCTTTGGGCAGTTTTTCTTTATCT 446 29 100.0 35 ............................. GGTGCTGAGGACGGAAAGGCGGGTTGGGTGATGGT 382 29 100.0 37 ............................. TCTCATGTCGCAACACATTAACCCGCTGGTGATACTC 316 29 100.0 36 ............................. GATTAACAAATCCACCCAATTTGCCCTGTTGTAAAT 251 29 100.0 37 ............................. TTATACCAATCATCAACATTCCAAGATTCACATTCAT 185 29 100.0 36 ............................. CCTTCTGAGCCTTTGAGCCATTAACCAAGTTGTTAA 120 29 100.0 35 ............................. GGGGAAATTGAATCATACATAAACGATCTAATATA 56 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 27 29 100.0 36 CTTTAAATCCCACTACGTTCAGATAAAAC # Left flank : TTCATACTCTGTGGTAAATTTTATTATTAATGAAGAAGGATTTATTTGAAAACTATAGAATAAAACTGTTGAATTAGGGCGCTAGTTAATAAAAGTGGTGAATTTGGCAATAATAAATAGATGTTGTAATAATCAGATTACAACAATTAGACTATAAGGCTGGTTTTGGCTGAGTCCTTTAATCATCCCATGGGTTATTGTTGCTGAGTCACACCTTATATAGCTATCTTCTAAATTAAAGATAAAGCAAGGAGGAATAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACGTTCAGATAAAACGGAGATTGCAAGACAGGATAGTTAACTAACCAACCAT # Right flank : CGATGTTATAAATCATGAAAGCATATCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAAATCCCACTACGTTCAGATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [33.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 3725-39 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSRS01000008.1 Sporotomaculum syntrophicum strain FB SPSYN_contig000008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 3724 29 100.0 36 ............................. AAATCTTTCATAGTTAGTTATTGTTAATTCCTCCTT 3659 29 100.0 36 ............................. GGTGGATATTGGCTACAACTACCTGGTTGATTTTAA 3594 29 100.0 36 ............................. CAACTACGGAAGCCTATTCCCCAACGAGGACACTAT 3529 29 100.0 36 ............................. AAAAAAGAAAAGAACAGGCACAAAAGAAAAAAGAAA 3464 29 100.0 36 ............................. ATGCAAGCACTATAAAAACCAACCTTAAAAACTACA 3399 29 100.0 38 ............................. GAGACCGAGCTGGGATGAGTTCTTCATGCAGCAAGCAG 3332 29 100.0 37 ............................. TAAGAGCATTCTGTGTGTGAGTGAATTGAGCAAACTG 3266 29 100.0 37 ............................. GAGGAAATGATGGCAGCAGCCAGCGTCACCCAAATTG 3200 29 100.0 37 ............................. GAGAAGATGGCCTACCAGCTTACATTGTTTCAGACGG 3134 29 100.0 37 ............................. GTGTTTCAGCTCCATGCACAGCTCCAGTGGTAATCCA 3068 29 100.0 37 ............................. TGTATCAGTGTCATATATGCCTTGTTCCAATAGGTCA 3002 29 100.0 35 ............................. CCAGGTAGCGGATGAGCTCAACAGCAGAATGGTAC 2938 29 100.0 37 ............................. GAGCTAATCTTTTAGAAAAAGTATTAGAAGCACTATA 2872 29 100.0 36 ............................. CATCATGGCAGATGTAATCGATAAAGTCGTTAGCCT 2807 29 100.0 37 ............................. CTGCCTCCGGACCGGCTTCACCAACGCCAATTATCTG 2741 29 100.0 36 ............................. GCTCACTGTGCACCTTAAGAAACGTGTATAAAACAG 2676 29 100.0 37 ............................. TGAAGCATGTCAGTGTATTCCGTAAATGCTTGGCTAA 2610 29 100.0 38 ............................. GCAGAAGCTCCAAAATGGAAAGCAGGTGAATTTTAGGA 2543 29 100.0 36 ............................. ATGCCCCAGTTACTCCGCCAAAGGTATAATAGCGGA 2478 29 100.0 36 ............................. GAAGGCATGCCGGGAGCTGGAGATAAAGCCAATCTA 2413 29 100.0 37 ............................. GGAGTCACCCGGTTAGCATTGGCAGTCATACAAACAA 2347 29 100.0 36 ............................. TGATTCAGAATGAATAACTTAGAATTAGCAAGATAT 2282 29 100.0 35 ............................. TAGCAAACATATAAAAAGGAACAACCTTTTATTAT 2218 29 100.0 37 ............................. GAATCCCAATTCAAACAATTTACCAGATGCGTAAACT 2152 29 100.0 36 ............................. TTTCGAATGATTCTCGGTAACGGCCGCTATAACTTT 2087 29 96.6 37 ............A................ AAATTTACGACAGGGCAAGCGATACCAGTCGGAGGGC 2021 29 100.0 36 ............................. GAATTATTGAGCATTGTTCTGTTACCTCCTAAATTT 1956 29 100.0 37 ............................. CATCATCATAAGGTTGTTCTTTTAAATAAGGTAAAAT 1890 29 100.0 36 ............................. GGGGTGGTGTAGCATGGCTGGGATGGGTAGTGTAAT 1825 29 100.0 36 ............................. GTAAATGTCAATTTCCCTTACACCGCCGACATCCTT 1760 29 100.0 35 ............................. TCATAACCTGCGCAACAGCAAGGCTCTGAAAACGA 1696 29 100.0 38 ............................. TAGTTACCGCAGGTGCATTTTGCGGTTTAATGTTTAGG 1629 29 100.0 36 ............................. GATCAAAGCAATAGAAACCCTGCAGCGTGTAGACAT 1564 29 100.0 36 ............................. ATTGAGCCACTGGGAAGACTTCTGTTTGCTGGGTTG 1499 29 100.0 37 ............................. AGGTATGCCGTGCTTATATAGCCAGCTTGCATGATAG 1433 29 100.0 36 ............................. GGTATTTTCTCAGCCAAGGGCAACTTTAAATTTTCT 1368 29 100.0 36 ............................. CAACAAACAGAACACTATGGATGTGCAGTTTATCAT 1303 29 100.0 36 ............................. AAAAGTATCAGAGTTGGAGTCTCTTTATATAGCCGT 1238 29 100.0 37 ............................. TACCGCAAGCTTGACAGACTATTGTTCCCGTAAAGGT 1172 29 100.0 37 ............................. GCTGTGCGGCCTGAGCCAAACGCGTGACAATACCAAT 1106 29 100.0 35 ............................. TCCATTTCCCTGGTGATCGTGTCTGGCCCGGAGGA 1042 29 100.0 36 ............................. TGATAATAATGGGCGGTACAATTATAAATATATTGA 977 29 100.0 36 ............................. CCATAGGTTTGTTGCATATAGCGTAATATATTACCT 912 29 100.0 36 ............................. CACCCATGAGGGACTGGATGTTACAGTTTAATAAAG 847 29 100.0 36 ............................. GATCAAAGCAATAGAAACCCTGCAGCGTGTAGACAT 782 29 100.0 36 ............................. TTGCACGTTACAGCAATGACCAATAAACTAATCTTG 717 29 100.0 35 ............................. GGTAATAAATCATCCTATAAAAATCTTCTATATCA 653 29 100.0 36 ............................. ATGACTGAATTAGAAAAAGTTTTTGATTCATTAGAC 588 29 100.0 35 ............................. TGTATACCCAGATTGAACAGGCTCGGTTCAAACCT 524 29 100.0 35 ............................. TATATAAATGCTTTTTAATAGTGTTTGATTTAGTG 460 29 100.0 37 ............................. CCTTACATTCAGTTATCGCACCGGGTTTGTATTGCTG 394 29 100.0 35 ............................. TATTGCCGAGCAACTTACTTGTATAACGATTCTCT 330 29 100.0 37 ............................. CAATGTCGAGGCGATGTTGGCCGAACGTTTTTCAACA 264 29 100.0 37 ............................. CAATGTCGAGGCGATGTTGGCCGAACGTTTTTCAACA 198 29 100.0 37 ............................. GGAGATTGCAAGACAGGATAGTTAACTAACCAACCAT 132 29 100.0 36 ............................. TTAGCAAATGTTCCCTGGAAGCGGTATAGCAATCCG 67 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 57 29 99.9 36 CTTTAAATCCCACTACGTTCAGATAAAAC # Left flank : TACGTTCAGATAAAACGAAGACTTATGAAGCCTACAAGGGAGGGCACACTGCTTTAAATCCCACTACGTTCAGATAAAACTAGTGTTAATGTTGGAGTGAGTGTGGTTGACTTCAACACTTTAAATCCCACTACGTTCAGATAAAACAAGCAACCAGCAGACCTGCTATGAGAGAGCCGAACAGCTTTAAATCCCACTACGTTCAGATAAAACGCAAGCTCTGTGATGACGTGAGGGATGGACTCCCCACTTTAAATCCCACTACGTTCAGATAAAACTTGTCAAGGCTCTGGAGAGCAATGACGAGGAAGCAACTTTAAATCCCACTACGTTCAGATAAAACAAGGCTCCTTGTCGCAGGCTGTTGCTCTGCGACTCACTTTAAATCCCACTACNNNNNNNNNNGATTTAAAGACAACTTGTCCCACTTTTGCCGTTTCGTTAGCCGCTGTTTTATCTGAACGTAGTGGGATTTAAAGCAGCTTGTATAGCAGGCCNNN # Right flank : CGATAAGTTTGATAGTACAGACCGGGCCAGAGAAGGCAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAAATCCCACTACGTTCAGATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [33.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 5535-3882 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSRS01000008.1 Sporotomaculum syntrophicum strain FB SPSYN_contig000008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 5534 29 100.0 37 ............................. TATTTCTACAATTAAATACTGCTGATTCATTAGTTAT 5468 29 100.0 37 ............................. ACAAGCAGGAATTATATTTACATCCTCAATCAGTTAG 5402 29 100.0 36 ............................. GTAATACTTGTTTGATTAATTCGTGGAAGGGATCAG 5337 29 100.0 35 ............................. ATTAATATTAATGATGTTCTTTCATTCTCATATCA 5273 29 100.0 35 ............................. AGTACTAAGATGTCCAGACGATAAACCAGATGAAA 5209 29 100.0 36 ............................. TGCAATATTACATAAGTATAATTAATATTGCCTATG 5144 29 100.0 36 ............................. CCAGTGACGGCCCTGCCGGCGGTGTGCGGGATGTGT 5079 29 100.0 36 ............................. CAACTACGGAAGCCTATTCCCCAACGAGGACACTAT 5014 29 100.0 36 ............................. TGAAATACTTTGAAGGCAACAGTAACCAGGTAGTTA 4949 29 100.0 36 ............................. TATTGGAATGGGTCTGCTTGGCAGGAGGTGTTATAA 4884 29 100.0 37 ............................. GCGTGCGGTATTGATGGTCCTGTAACGCTAAAAGCAA 4818 29 100.0 35 ............................. CAATGCCGCAATCAATACTTCAGCCAGTGGGGCAG 4754 29 100.0 36 ............................. TATCAGGAAATGACCTGGCCAGCCCGACATTGGTTA 4689 29 100.0 36 ............................. GGAAAAGTACGCGGCTGGTAATATTGTTGCTTATGA 4624 29 100.0 35 ............................. GGAAGGGTGCAACACCCCATACCCTCTGGTGCTTA 4560 29 100.0 34 ............................. TATTCTCGACCGATTCGGCTAGGAGTTTTTGTTT 4497 29 100.0 36 ............................. TTTATGTTAATGTGGTTATTGTTATATTCTGTTATA 4432 29 100.0 36 ............................. TTAGTTCATGGAAAGGATCAGCGGTATTATTAGTAT 4367 29 100.0 36 ............................. ATTTTAATAGGTTGGCAAACGGTAGAGAGGTCACAT 4302 29 100.0 36 ............................. AAGAGCATTCTGTGTGTGAGTGAATTGAGCAAACTG 4237 29 100.0 35 ............................. GAAGACTTATGAAGCCTACAAGGGAGGGCACACTG 4173 29 100.0 38 ............................. TAGTGTTAATGTTGGAGTGAGTGTGGTTGACTTCAACA 4106 29 100.0 37 ............................. AAGCAACCAGCAGACCTGCTATGAGAGAGCCGAACAG 4040 29 100.0 36 ............................. GCAAGCTCTGTGATGACGTGAGGGATGGACTCCCCA 3975 29 100.0 36 ............................. TTGTCAAGGCTCTGGAGAGCAATGACGAGGAAGCAA 3910 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 26 29 100.0 36 CTTTAAATCCCACTACGTTCAGATAAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAGACAACTTGTCCCACTTTTGCCGTTTCGTTAGCCGCTGTTTTATCTGAACGTAGTGGGATTTAAAGCAGCTTGTATAGCAGGCCATG # Right flank : AAGGCTCCTTGTCGCAGGCTGTTGCTCTGCGACTCACTTTAAATCCCACTACNNNNNNNNNNGATTTAAAGACAACTTGTCCCACTTTTGCCGTTTCGTTAGCCGCTGTTTTATCTGAACGTAGTGGGATTTAAAGCAGCTTGTATAGCAGGCCNNNCTTTAAATCCCACTACGTTCAGATAAAACAAATCTTTCATAGTTAGTTATTGTTAATTCCTCCTTCTTTAAATCCCACTACGTTCAGATAAAACGGTGGATATTGGCTACAACTACCTGGTTGATTTTAACTTTAAATCCCACTACGTTCAGATAAAACCAACTACGGAAGCCTATTCCCCAACGAGGACACTATCTTTAAATCCCACTACGTTCAGATAAAACAAAAAAGAAAAGAACAGGCACAAAAGAAAAAAGAAACTTTAAATCCCACTACGTTCAGATAAAACATGCAAGCACTATAAAAACCAACCTTAAAAACTACACTTTAAATCCCACTACGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAAATCCCACTACGTTCAGATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 3 7751-11631 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSRS01000008.1 Sporotomaculum syntrophicum strain FB SPSYN_contig000008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 7751 29 96.6 36 N............................ CAGTATGCGCGGATCACCACGAATGGGAATAAGTTA 7816 29 100.0 36 ............................. ATATATGGTAAATCTGATATGTGGGATCGGCTTTAA 7881 29 100.0 35 ............................. ATGTTATTAAGGAAAGAGATAAAATTAATCAATAT 7945 29 100.0 35 ............................. CGAAAAAACTATTAATAACCATAACAGCAGCCAGG 8009 29 100.0 36 ............................. ATGTATTATAATATTATGATAATCATAAAGTTATAT 8074 29 100.0 36 ............................. GAAGGTTTTGAAGACGAAGAAGTGACAATCATGTTT 8139 29 100.0 36 ............................. ATTTAAAACAATGCTTGGACGAAACAACACTGAAAT 8204 29 100.0 36 ............................. ATAGAACTAAAGACAATTAAAGAATTAATGTTGGCA 8269 29 100.0 37 ............................. CAACATTATATACCTGATATTATGAAGGCTTTAAAAG 8335 29 100.0 35 ............................. AAATATAATTATGGATTAAATGAAGATTTTGAAAA 8399 29 100.0 36 ............................. CAGCAGACACAGGTATCACTCATATGTATTACCTCC 8464 29 100.0 37 ............................. ATCAATTAGGCCGGCTGGTAGCGCGGATGATAATGTA 8530 29 100.0 37 ............................. ATCCAAGGCCGTGCTCGGCTTGGAACCGGCGACATAC 8596 29 100.0 38 ............................. ACGCTGACCACCACCGCCGCCGCTACCAGCCAGTGCAA 8663 29 100.0 36 ............................. CCGCTTTATCAAAAAGGCAGCCCGGCTTTATAAAGA 8728 29 100.0 36 ............................. AAATTTGATAATTTTGTGATTGGTAAGCGTAAAGAA 8793 29 100.0 36 ............................. AAGGTTGGCCTGGGGCTGCTACGCTTTATCGTCTGC 8858 29 100.0 37 ............................. TCAGCTCTCGGGTGATTTTCACCGGCGCAGGACCATG 8924 29 100.0 36 ............................. ATTTGGGTGTGCCCGGATTAGCAGATGGTGGTTTGG 8989 29 100.0 35 ............................. CTGTTACCGCAGTTGGTCTGTTGCGGTCTTTGCGG 9053 29 100.0 36 ............................. ATGTAGCATCACCTTATCGCGCCGGTGGCCACAAAC 9118 29 100.0 35 ............................. ACTAATTGGGAACGGTATAAAACACAATCTTTATA 9182 29 100.0 37 ............................. ATATTTATTATCCCTATGACCCAGGCAGCACTAAATC 9248 29 100.0 37 ............................. TTGCTATTGACGATGGAGACGCAGGATCTGCCGGAGC 9314 29 100.0 37 ............................. TTTTTTATTACCTCCTAATTTATCCTCTTATTTTTAA 9380 29 100.0 36 ............................. ACAAGTACCTTGTGTACAAGCGAATGCCGCATCATA 9445 29 100.0 35 ............................. TAGTAATAGTTATCTAACGAAGCTAATTTAGGAGC 9509 29 100.0 38 ............................. CAGTTAAGGAAATAAAGGCACTTGTAGGAGAATCGATA 9576 29 100.0 37 ............................. GAGTATATAATGTCCTGTTTAAGGCGGGATAGAGATT 9642 29 100.0 36 ............................. ATTGTAAAAGCAATACTACCTGGAGGATATAAATCG 9707 29 100.0 36 ............................. ATGTTTATCCTCACAAACTCAGGCACACCTTTGCTA 9772 29 100.0 37 ............................. AGGGGTAAATTTGGCCTGGATAGTTGTGGTATTTTGA 9838 29 100.0 36 ............................. TTGCCATGTCTCCGGGGAAAACCCACGCTTTTTTAA 9903 29 100.0 35 ............................. ATCTCTGTAAAGTATGAGTCCGCTGATTGTTGATT 9967 29 100.0 36 ............................. TTTGTACGGCTCTGGGTGTGATACCGTATATTTTTG 10032 29 100.0 35 ............................. ACATTTACTTTAGAAGCATATTCGCCGCAAAGGCG 10096 29 100.0 35 ............................. CTAATATTAGCATTAGGATCAATACTCATATCAGC 10160 29 100.0 36 ............................. GTGTTGATGTTACGCTGGTGCCTGGGGTAGTGGCGT 10225 29 100.0 36 ............................. TCTCATTAAGCATTTCAAAACCCTTAAAACTTTTTC 10290 29 100.0 35 ............................. GAAGCAAAAGTGATAGATTTTATGCAGGAAAATGT 10354 29 100.0 36 ............................. TAATATTATTAATTTCAGCACCGCTTCCTAATACTT 10419 29 100.0 37 ............................. AAAACTTATCATTGATTCCTAACAATTCACTTCTAAA 10485 29 100.0 36 ............................. GGGCTATAAAGACGAGCACTTTATAGCCTTTATTTA 10550 29 100.0 36 ............................. TGTATAGTTTGCTTCATCGTCTACAGCCTCTAGCCC 10615 29 100.0 35 ............................. ATAATTATTGCCGGCGGTTAAGCCAGATAAATTAA 10679 29 100.0 36 ............................. ATAGTTGCCTATATCGGCAACCGTTATAATTCTTAC 10744 29 100.0 35 ............................. TAATACACAATTAGGCACTGATGTTTTACTTAGTA 10808 29 100.0 37 ............................. TTAAAAAAGCGGTTGAGGTGCTAAAGGAAAAGGGTGG 10874 29 100.0 36 ............................. GTGTGTTGCCGGAGAAGTTTTTACTCCCGGAGTGGC 10939 29 100.0 38 ............................. GAGAAAGCGAAGAGTTGCAATGGTTTGCGGCTCTTCGC 11006 29 100.0 37 ............................. ACGCTTCAGCCAGCTTCATAGCTAATCTCGGTCCCGG 11072 29 100.0 38 ............................. ACAATCACCGCTTGTCTAACAAGTAACTCCCATATGTG 11139 29 100.0 37 ............................. ATGCAACCGCCCGTGGCCTTGGTGAATCCGGTGTGGT 11205 29 100.0 37 ............................. AAGCAACCCGCGCAACACTGGCGCGGGTTGGTGTAAA 11271 29 100.0 36 ............................. CTAAAAACAACTCCTTTGCAATAAAAAAAGGGGCAG 11336 29 100.0 40 ............................. ACCGCAATATCTACCGGATCACCATCGAAAGATATCGCTT 11405 29 100.0 38 ............................. ATTAGTGCAGGATGAAGAAATAAACTTTGCTCTATCCA 11472 29 96.6 36 ............G................ TTTAAACCGGACTCAATTTCTGCAAGATAATCGTAA 11537 29 100.0 37 ............................. TCATATTCTTCGCATCTGCGTTTATCTAATAAACCAG 11603 29 89.7 0 ................A..........GA | ========== ====== ====== ====== ============================= ======================================== ================== 60 29 99.7 36 GTTTTATCTGAACGTAGTGGGATTTAAAG # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : AATAGTTGATGCGCCTGATGGATACTGGTTGTTTTATTATGAAAAGAAACACCATAATAATGTAGGTATTTATGTGTAAGTGGACACAAGGCCAAATAACAATTCTTGAGTTGGTATACATAGTATTGTCGCTTCACACGGGCTTTTGCCTCTGCTTGTCTCATGAAGAAAGGCGTACCGGAAGACGAATGCATTTAGACAGGTTAAGGTTTGCGGTTTTTATAGGAGAATCTTTGTTTTAGAAGCACAAAAACCAAGAAGCAGGAGGTCCGCACTCCTGCTTCTCTTTTCCGGTCTCAGCGTCTATTCTGGCAGCACGGCTATTCCTTGCTATTGAAATAGTAATAGAAGCCGATGTGTAGAAGAACCAGCACGAAGATCACCATCCCCAGCATGTTATAGGGATTAACTGTAATCTCCGGTCCAAAGATAGATCCAATCAAAACAAATAGTGCACTCGCTATAAGGAAGGTGCTGCATGCAGCATAGGCAGCCTTTCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 4 63325-65876 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSRS01000008.1 Sporotomaculum syntrophicum strain FB SPSYN_contig000008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 63325 36 100.0 35 .................................... ATATTCCTGTGTCAAATCCTACACCCCCAACGCCC 63396 36 100.0 38 .................................... CCGCAAACATTTGACCGATATTATTTAGGTGTTGACTA 63470 36 100.0 34 .................................... AAGAATATGAAGCGGCCAGGGAATCAACCATGAA 63540 36 100.0 35 .................................... TTCGACTGCAGGCGCCCCAAGTTGCACACCTTTGG 63611 36 100.0 34 .................................... CGCAAAGCTAAAAAATAAATATCGTCGTACTCAC 63681 36 100.0 37 .................................... TACTACGAGTACGTGAAGTTTGTATAAAAGAAGAATA 63754 36 100.0 35 .................................... TATCACAAGGTGGATTTATCCGTTTAGATAGGCTT 63825 36 100.0 35 .................................... AAGAGGATTTTACGATAGATAGCCAGTTAAACTTA 63896 36 100.0 36 .................................... GACAGGCTGCACGTCAGTCAGAGCGCTTATTATGAA 63968 36 100.0 35 .................................... AGCAGGGAGCAGATAATAGCCCTTATTTACCACGA 64039 36 100.0 36 .................................... TGGAAGCCGGAATCATTCCGGTGGAGCTTAAAAACC 64111 36 100.0 35 .................................... CTATAATGATATTAACAACAAGGGGACAGCACACA 64182 36 100.0 40 .................................... TTTAGGGCAGAATAAAGCAGAGGTGCTTGCGTTAAAATGC 64258 36 100.0 36 .................................... CGCAAGTCGTTGAACGGCTGCAGCAAAAATATACAA 64330 36 100.0 35 .................................... TTCTCTTAATTCTTCTTTAGAGATATATTTACCAA 64401 36 100.0 34 .................................... AATCTGGTAGGTAAGGGCTTGCTTAATACTCAGG 64471 36 100.0 35 .................................... TAAGTTTCCTATTTAAATACTTTGCTTCTTGTTTA 64542 36 100.0 35 .................................... AAGACCAAGCAGAAAAATTCTTTGTGTCTATGAAT 64613 36 100.0 34 .................................... ATTTTAAATCTGGTACTGGTGGTTCTGGTGGTAC 64683 36 100.0 39 .................................... TTTCAAGTAATTTGATAGCATATGCACCAAATTCTTCAG 64758 36 100.0 38 .................................... TTACTGAGGTAAATTCTGTTTGCAAGATGCTTTCAAGA 64832 36 100.0 35 .................................... AATGTAGAGATAATGCAAGGAAATTAAATATAAAA 64903 36 100.0 33 .................................... TATAAAAATTTTTTTACCTCTTTTGGGTTCAAT 64972 36 100.0 35 .................................... GTCCAGAAGATAAAGAAGTAGACCATATTAATGGT 65043 36 100.0 38 .................................... AAGCTATTAGTTCAGAAATTTAAATAAATTTAATTAAA 65117 36 100.0 35 .................................... GATACGTTTGAGAAATATTTATATTTAAAAGATGT 65188 36 100.0 34 .................................... GAAGTGCTAGGGGTTATGATAAAGGCGTTATTAA 65258 36 100.0 36 .................................... GGCAATATCCTGTTGCAGGTTGGATTTTTTACGTTT 65330 36 100.0 36 .................................... ATCGTTACTTTGTAATGATTTGCGAGGCCGATACAG 65402 36 100.0 39 .................................... TTATTGATTTCGTTAAAAACGCGCCGGAGGATTCGGTGA 65477 36 100.0 37 .................................... TGGATATCTCCCTGTGCGCCGATTACCAGGCTCTAAA 65550 36 100.0 38 .................................... ATTACAAGGCTGGTTAATGAAACGGCTGAAAAGGAAAA 65624 36 100.0 34 .................................... ATGATGATGCAGGGTTTGATTTGCGGGCGAATAT 65694 36 100.0 38 .................................... GACAAAATGAGGCGGCAATTCATGGAGAAGCCACTTGA 65768 36 100.0 37 .................................... AAAGGCAAGTTTGCCGAGGGCCAAGAGACTACCGCAA 65841 36 97.2 0 ....................A............... | ========== ====== ====== ====== ==================================== ======================================== ================== 36 36 99.9 36 CCGAAATTACCTCTGATGCCGTAAGGCGTTGAGCAC # Left flank : TGCCAAGCATCTTAAAGGGTATGGTGAGAGAATACAGTTTAGTGTTTTCCGTTGTCGTCTGAGCAATCGAGAAGTAGAACGTTTACGGTGGGAATTATCAAAGTATATGACTTCTGAAGATGATCTTATTATTATTGGATTATGTTCCTCCTGTGTCAGTCGACTTCGAAAAAGTACGGGTGATGGCTGGCCGGATGAGCCTCCCAGCTTTGAAATTATTTAATTGTATGGATTTTCAAGCATCTGACCTTGTTCTGGAATTTTCGTAATGGATTATGCTGAAGTTATTGAACTGTCTAATAAAATTAACATTTATTGCATTGTGAGATGCCTGAAAACTGGTTAGTTTAATTTATTCAGTGATTATTTAATATTTTGGAGAGTTACAAATTAGAATTTATCAAATATGGATTATCGGTATGCTGATAAATATATCTATTATCATACCTTGAAAAAGTGACTTGGTAAGCCTTTACGCAGTAAGCACTAAGTGTTACGCT # Right flank : CCCCCCTTGATTGTTTCCTCCGGTGTCTCAAAGGCACCGAAATTACCTTTGATTGTTGATGCGAACCTATAGCTAACATTGCTTTCCAAGGGGGTTCGCATGGTCTAAAATATCTGGATTTTTTTGTTTAATGTTGTAGTGTCCAGGTGAAGAATGATTTCTAAATGGTGGTTCGCGAAACAAGGCTTTAGAATTCTTGCTAGCAAAGGTTTTTCACTTTGACAGTCGCACCCCGCGCGGGTGCGTGGCTTGAAACCATATGACCAAGTTATACTGGAGAATAACAAGGAGTCGCACCCCGCGCGGGTGCGTGGCTTGAAACCCCAGAAATATCGGCAGAAGCTTAGATCTTCAAATGGCTTGTAACGACTTAACGAAGAGATTCGACGCAAGGATCGTGTTATTCGTATTTATCCAGATGAGGCATCTTTTATCAGGCTTATCGGCTCACTGCTTATTGAACAGGATGAACGTTGATCTAGCGGACGCAAGTATTTTGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGAAATTACCTCTGATGCCGTAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //