Array 1 427354-426005 **** Predicted by CRISPRDetect 2.4 *** >NZ_AJYD02000013.1 Enterovibrio norvegicus FF-33 FF-33_contig_18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 427353 28 100.0 32 ............................ GAACAGACCGGGCTTTTAACCGAACCTTTAAC 427293 28 100.0 32 ............................ AACACTGATTACGACTTCGACGGTAACGTTGT 427233 28 100.0 32 ............................ TGATCGTCAACTGCTCGGCCTACAACAACGTC 427173 28 100.0 32 ............................ GGAATGATGAACTATTACGTCGTCGACCTGAA 427113 28 100.0 32 ............................ ACCACATTGCCGCTATCAGGGAACGGCCCAGA 427053 28 100.0 32 ............................ ATTGTATCTTGCGTATTAGTTTTAAATTTTAG 426993 28 100.0 32 ............................ TGGCATATGCGTGACACTGCTTCTTAAAGTCT 426933 28 100.0 32 ............................ CGTTGCGCACTCAATCAATGAAAATTCACTTC 426873 28 100.0 32 ............................ ATATGACGACACCGAGAGTGACACACACGATG 426813 28 100.0 32 ............................ GGGTAGACCTTTCTCACCCGTGCTTTTATCTA 426753 28 100.0 32 ............................ TTGAGTGCGCTGATTGTCAGACTTGCGAAACT 426693 28 100.0 32 ............................ CAAGCCGACCGGCCATGATGGGTACCTTTCAA 426633 28 100.0 33 ............................ TAATTGATAGTTACCTACAGTCTTTTGCATTAG 426572 28 100.0 32 ............................ TTGTGGCCAGGGAACAAGCCGTTAAACTCTGA 426512 28 100.0 32 ............................ ACTCGGTAGGGCGAAAGGGTAAGCACAACAAG 426452 28 100.0 32 ............................ TTGATTGGCTCCCACTCTGGGTACAAATCAAC 426392 28 100.0 32 ............................ AGTAAATCGATACCGTATGGAGACGATGAAAG 426332 28 100.0 32 ............................ TGAATGACATCAAGCGCGATGAATACGAAAGC 426272 28 100.0 32 ............................ AAAAATGAAACATTCGTGCCGTTATCAAAATG 426212 28 100.0 32 ............................ ATGTTCCCGCTAGTTCTCCCGCATCAAATGTC 426152 28 100.0 32 ............................ TGAATGTCTTTGTCGGTTAAAGGCCCGGACAT 426092 28 100.0 32 ............................ GTATGGGCCTGTTGAATCAATAGTGATGTTGT 426032 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 23 28 100.0 32 CTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : ATCGCTTAATGACACAACCTTGGCTTAAAGGTTTACGAGATTACACATCGGTCAGTGATATTTCTCCTGTACCAGACAATGTTCAAGGGTATCGTTCCACGTTTCGAGTGCAACAGAAAAGCCCTCAAAACATCCGTAGACGCGCCATCTCTAAAGGTTGGTTATCTGAAGAGGAAGCACTGCATAAAATCCCAGACTCCAAGCAAAAGCGACTCTCTTTGCCTTTTATCCAAATAAAAAGTCAGTCGACCAACCAAGAGGTTCGTCTTTTTGTTGAGCGCGGAGAATTACTAGATAAACCCGAAACTGGCCACTTTTCCAGCTATGGGTTCAGTAGAACAGCAACCACCCCTTGGTTCTAACCCACTACAACCCTATTTTTCAGGCCTAACTTAAGCCATTGATTCTAAATGGCTTAAATTTCCATTCGAAAATAGGGTTTTTCCATCATATTTCTTCCTAGCTCTTTAAAAATCTATGCTTCAGAGATATCCTCAACC # Right flank : CGAAAGCCACTACGCATTATACCCATAGTGTTAAATAGCTTTAGTTAGCTTTTTCATACTTCGTTGTCCGGCGCAGCGCTTGGAGCAATACTTCACGTCATCCCACACACGTTCCCATTTCTTGCGCCACGTAAACGGGCGCTCACACACAGCACAGGTTTTCGAAGGTAACGTTTTTTTCTTCATTCAGTGTCCACCAATATCATCAATCTGGCCTTACGTGTCGTTTGAGTAAGCGATGCGCTTCACGTTGTACTTCGGGCAGCTTTCGCCTGCACAATTGAATACACCTGACGAAGACTCAAATTACCCCACGCTAAGTAGGCAGAAACCCAAAAACATCGATTGCATCCAAAAACAAATAGCGACAATCCGACTTTGCGGGTGCGCATGATTGTGACTATTGGTTCGACATCTAACGTCTTTTCTTTTGGTCCGTGATGGAAAGAACCTACGAAGCGAACGAGCAATTAGATTGTTAGCGACAGAAAATTAAAGAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 437209-435802 **** Predicted by CRISPRDetect 2.4 *** >NZ_AJYD02000013.1 Enterovibrio norvegicus FF-33 FF-33_contig_18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 437208 28 100.0 32 ............................ ATTAGATGTGGGGCTTGTGCCGTCACTACCTT 437148 28 100.0 32 ............................ AAAGTCACCGCCACCGGAACCACCATCACCGC 437088 28 100.0 32 ............................ AGTCAAACCGCAGAAGGCCGTAAATTATGGCA 437028 28 100.0 32 ............................ TTCCATAGTAGTACTGTAAGGTGACCATTTCA 436968 28 100.0 32 ............................ CTCAGCATCAGAAAGGGCGCCCATTCCTTTCA 436908 28 100.0 32 ............................ TTCGTGTGGCATCCCTTCATCAATGAAGGTGC 436848 28 100.0 32 ............................ TCAATAATTAGCTCTTGCTGACCGCCATAGCC 436788 28 100.0 32 ............................ AAATATCCATCAATGAATTGCCCACAGCGGCA 436728 28 100.0 32 ............................ CTTGCTAGCGCCCTTTAGGTGTCTAGACTTGG 436668 28 100.0 32 ............................ CTTTCCAGTTTCACCGGCAGCGATTGCCCCAG 436608 28 100.0 32 ............................ TACGGGCGTCTTTGTTATTGTGTGGTGTAAAT 436548 28 100.0 32 ............................ CAATGCATTCGGACAGCAACGCGCACGCGCAC 436488 28 100.0 32 ............................ TGCCCGAATTCACGGGCGAGGTCTTGCGCAAA 436428 28 100.0 32 ............................ AAAACGCGCCATAAACGCTTTGTAACGTGGGT 436368 28 100.0 32 ............................ AGGTGTAGCCCCTTTCTTATCAGAACAAGGGA 436308 28 100.0 32 ............................ TGGTCCTGTTACCTTCCATAGCGGTCTATTGT 436248 28 100.0 32 ............................ CACGTTATTGCCATTCAACTGAGGAACCGGCA 436188 28 100.0 32 ............................ TCATGGTGGACTAACATGTGTCGAGTTGGTTT 436128 28 100.0 32 ............................ TCAGAGAAGCAATCGCACTTATCAATCCATGC 436068 28 100.0 32 ............................ AATAAAAAAGGCGGCAATTAAGCCACCTGATT 436008 28 100.0 32 ............................ ATATCAGCCGCCTGATTGCCCTGATGATGACT 435948 28 100.0 32 ............................ GTAAGAGCTTGTCGGTGTTGAGTTCATTGGAT 435888 28 100.0 32 ............................ CGAATGAGTCAAACAAGCTCATCGCTCACCCC 435828 27 82.1 0 .................A.AA.-....C | ========== ====== ====== ====== ============================ ================================ ================== 24 28 99.3 32 CTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : ACATGCTGATAGAGCTGATGGCGGCGATGGCTAGAAAGGACTACGAAACAAGACGGGAACGCCAACGCCAGGGCATAGAAACCGCCAAGGCCAATGGCAAATACAAAGGTAAGCAAGCCGACACCGAACGGCACCAGAAAGTGAGAAGCTTTAGAGAGAAAGGCTTAAGCCTGAAAGAGATTGCAGAAGCGACCGGCTACAGCCGATCGCAGGTATGTAGGATTTTGGCGGGATAAAACTACTTACACTTTTAAAAATTTACCCATCTTTTTAGAGGTATTGTTAAGGCACTGATTTTATTGGAATTTAAATTAAGGCGAAGAAAAAGGGTTTTTTCGTCGTATCTTGATTTAGGCCTTTAGAAATCTGTGATGACAGCATATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCGCCGCACTGGCTCGCCAAGTTG # Right flank : GGAAACGTTAACAACAAACAATCAAAAAAATCACTTAAAGACATTCAGTTTGGTAACTCCAGATCCACAACCATTCAGTAATCACAAACATGACATAAATGTACTTATAATTGGTCAACAATTTATGAGTTTGTAGTTAAAATCCAAACAAGATATGCAACCAAGTTTATTTTGTAGCAAACATGGCCAATAAAGACTTTTCTCCAAGTGATTTAAAAACAATTATCCACTCTAAACGCGCCAACATTTATTACCTTCAACACTGCCGTGTGCTGGTAAATGGCGGACGGGTTGAATATGTCACCGACCAAGGTAAAGAGAGCCTTTATTGGAATATCCCCATCGCAAATACCACCGTGGTGATGCTCGGCACTGGCACATCCGTTACACAGGCAGCCATGCGCGAATTTGCAAAAGCAGGCGTTTTAGTCGGTTTTTGTGGCGGCGGAGGCACGCCGCTATTTAGTGCCAACGAAACTCAGGTCGAGGTTTCGTGGCTA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-11.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //