Array 1 126192-132705 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADHDW010000003.1 Bacillus sp. REN10 scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 126192 32 100.0 34 ................................ AAGTAAAAACATACACAACAAATGCCGGCGACAT 126258 32 100.0 34 ................................ TATTATTATAGAAAAAAGTAGTTCTGAGGAATCC 126324 32 100.0 34 ................................ ATGCAGGATGGGCTGTGGAAGAGAAGGCGACAGC 126390 32 100.0 36 ................................ CGGACATTGATACAGATATTGTTACCGACCGGCCAG 126458 32 100.0 34 ................................ AAAGAAGGAGCTTATACAGGTCAAGAGGCTTTAT 126524 32 100.0 34 ................................ TAACCGCTCATTGATCAGGCTGTCAGTGTTAAAC 126590 32 100.0 34 ................................ AGATCATCCATGTCTCTTGGAAGCTCAATGTCAT 126656 32 100.0 34 ................................ CTCAGCAGTTACCCAACTAAAGAAGCTTTTTAGA 126722 32 100.0 34 ................................ AATCATCGCAAGAACAGTGTTAGCAGCACGACTA 126788 32 100.0 33 ................................ TGGCCAAGATTGGCGTGAATTGGTTGATCAACG 126853 32 100.0 34 ................................ CTTTGTATCGATGTACATTAATCATCTTGCTCCC 126919 32 100.0 36 ................................ CATGTCACGAACAGTCAAAGTGATCAAGTCGCTATC 126987 32 100.0 34 ................................ CCTTCCCGATCCAAACGAAAAGATGTAATGGACC 127053 32 100.0 33 ................................ AATTGTTATTTTGGATGAGGCGGATCTTGAAGC 127118 32 100.0 36 ................................ CAACAAATACTTGGAAAACCTTGATATCGACTGGGG 127186 32 100.0 36 ................................ CCCCTTTAACAAATCGTAAATGAATAGTCTGCCCTT 127254 32 100.0 34 ................................ TTCATTTGCTCGAATCGATCGCTTAAAAACTTTG 127320 32 100.0 35 ................................ AAGTCGAGCATTTGAGTTAAATGGCGTGCCTGTAA 127387 32 100.0 34 ................................ TATAAAACGCTGCATAAGTGAGTTAATACTCTCA 127453 32 100.0 33 ................................ ACTTTCAACCGCTGTTTTTGTTGCTTCTCGATC 127518 32 100.0 34 ................................ CAAAGGGTTGGAACATAGAATCATGTTTAAGAAA 127584 32 100.0 34 ................................ ATCAATAACATGATCATCTTCATTGAACATGTCA 127650 32 100.0 33 ................................ AGCTAATTGTTTAGCGTGATACTCTTGCACCAA 127715 32 100.0 35 ................................ GCAATACCATCAGCAATCGCTTGGCAGAAGTCGTT 127782 32 100.0 34 ................................ GATTAATAACAGGGCAAGATTACACAAACGCTTA 127848 32 100.0 35 ................................ TTGGAATGGAGTGTTTAGCAAAAAACGTATAGAAC 127915 32 100.0 34 ................................ CTTATTTTCGAGATTCAAAAAATATGGTTCAATT 127981 32 100.0 33 ................................ GTATGAAATAGAGGAAAATTACGATAAAATGTC 128046 32 100.0 35 ................................ AGTTAGAGTGTGGAATAAGCTGTTGACGACTTCTC 128113 32 100.0 33 ................................ TAAAATCGACATCGTGCAATCTAATCCGCTTTC 128178 32 100.0 34 ................................ CTTTTGTTAAAACTATATCTCTATTATATCCAAC 128244 32 100.0 34 ................................ TTTCAAAAACTCTCTATTCATTGTAATCTCCTTA 128310 32 100.0 34 ................................ ATACTCATCTAAACGCTCCTCATGTTGTAGCTTA 128376 32 100.0 32 ................................ ATCGGTGGAAAGAAGCAAGGCGGTCAGCAAAA 128440 32 100.0 32 ................................ ATCGGTGGAAAGAAGCAAGGCGGTCAGCAAAA 128504 32 100.0 34 ................................ AAAACATATGTAGATGTCGTAAAAACCAAACGTG 128570 32 100.0 36 ................................ ACTTGATCCGCAGGGTAGTAATAAGGACAAGGAAAT 128638 32 100.0 34 ................................ CGCTATATCGTTGTAGTGATGGAACATATATAGC 128704 32 100.0 35 ................................ CCATGTGTACGGTTCGAAAGACGTTTTGGGCAGTC 128771 32 100.0 35 ................................ CCATGTGTACGGTTCGAAAGACGTTTTGGGCAGTC 128838 32 100.0 33 ................................ CTCCATATTAACTCGTTTCACTGTAAATTCCCC 128903 32 100.0 34 ................................ ATTATAGTGTATTAATGGATAATGTAATGAAATC 128969 32 100.0 33 ................................ CGCACCAACACTATCTATCGCTACTTTACTAGC 129034 32 100.0 33 ................................ CGCCATATCTTGTAGCATTTTAATGTAAGCATC 129099 32 100.0 34 ................................ CTTAACTCTTCTTCTGACACTTGTTCGACTATAC 129165 32 100.0 34 ................................ ACTATTGGAATGAGATTAACAAAAAGTCAGGAAA 129231 32 100.0 34 ................................ AAAGCTATTTGTGTATCTGTATGGAATGACGGCG 129297 32 100.0 36 ................................ TAAAATCGACATCGTGCAATCTAATCCGCTTTCCGT 129365 32 100.0 34 ................................ AAAACAGAAGAAGAGGTAAGCACGATTATCAACT 129431 32 100.0 34 ................................ AAAACTTAGTTGAAGATTGTCTGTGGCTCGCTAA 129497 32 100.0 34 ................................ CCACACCTTTCTCGCCAGCTAAATCAACACCTTG 129563 32 100.0 33 ................................ TAGCGACTTAATGGCTCTCTTAATCGTATTAAC 129628 32 100.0 33 ................................ ATAATGCATCAATTTGTCAGAGTCAATACGATT 129693 32 100.0 34 ................................ ATATCATCGCCACCTCTCATTTATTTAACTCTAA 129759 32 100.0 35 ................................ TTTAACTCTTACAACTGGTTTAGTAGTGGATTTAA 129826 32 100.0 34 ................................ GAATTAAGAATGCTTATCCAAGTGATTTATTAGC 129892 32 100.0 35 ................................ TTTGGAGCGATCGAATCAGCACAAATCGCTTTTGC 129959 32 100.0 34 ................................ AGAAATGATCTTTGCGTGCACTCCTTCATTTATT 130025 32 100.0 36 ................................ AAGAACGACATGAAGATCACAGAAGGTGTGGGTCAC 130093 32 100.0 34 ................................ CTGTGATTGCTCCAAAGATTGCTAGCGTCGTAGA 130159 32 100.0 35 ................................ CCTGACAGCTTTCTCGCTCTGCTTCGATAACACAC 130226 32 100.0 34 ................................ GATAAGCTAGCCAAAGAAGGATTCGAGCGGAATG 130292 32 100.0 35 ................................ AGGAGGAAGCACAGACTTAATTGAGAAAACGATCG 130359 32 100.0 34 ................................ TTCGAAAATGACAACACAAGAAACATGGGCTGAT 130425 32 100.0 35 ................................ AAAGTCATGCTCATCCGTTGGGCTGTCTCCTAACC 130492 32 100.0 33 ................................ GGTAACGTGTATCCTGCTTCAAAGACGATTTTA 130557 32 100.0 34 ................................ TGTAAAGCAAAAGAAAGTCCTCACATGGTGGCGT 130623 32 100.0 35 ................................ TGTTGCTGGTCCAGAGGGGGCATATGTGTATTGGG 130690 32 100.0 34 ................................ TATGGAATCCTTAATAGTATCTTTTTCTTGTTTT 130756 32 100.0 33 ................................ CGCTATAAGTAGCGAGAGGGATCGCTACTGTGC 130821 32 100.0 33 ................................ CTGCTCCAGCAGTGACGCTGTGTCGATTACGTC 130886 32 100.0 33 ................................ TGATTACGCGCTAAGTTGTAGAAAAACGCAAAG 130951 32 100.0 33 ................................ CACCTTTATCATCCTTTCTTTAATGCGCTTCAT 131016 32 100.0 34 ................................ ACCAGTGTTTAGAGGACCTGCTGTAGAACGTCAC 131082 32 100.0 34 ................................ ACCAGTGTTTAGAGGACCTGCTGTAGAACGTCAC 131148 32 100.0 33 ................................ AAGCTACAGATTGGAGAAAATCACATAACTTGC 131213 32 100.0 34 ................................ ATTGATTGTCGCTTCTTTGTGTGCTTGCATCATT 131279 32 100.0 35 ................................ ATTTCTTGCTTGAGCTTTCGCGTGTCTTCGTTCAT 131346 32 100.0 35 ................................ ATTTCTTGCTTGAGCTTTCGCGTGTCTTCGTTCAT 131413 32 100.0 35 ................................ CGTATATGCGCATGAATACTGGCGGCCAGTTATAC 131480 32 100.0 34 ................................ AAGCCGGACTTGATTTAATGACAGCACTAAAAGA 131546 32 100.0 35 ................................ GCCTAATGCAGACTGCTGTGTACCCGTTTAATAAA 131613 32 100.0 33 ................................ TTGATGAGATTTACGGTCGAAACGACGCGGCGT 131678 32 100.0 33 ................................ TCCGTGAGGCTTTCCTCGTCTTAACACGTTAGG 131743 32 100.0 34 ................................ CGGCCATCTGATAATCTTGATCACGGCAGGAGAC 131809 32 100.0 35 ................................ TCATCGTAGATACAAGTAGCCCCTTGTGGCGTTGC 131876 32 100.0 33 ................................ TTTAATGGTTGCACATCAATTAATGCCGGGGGA 131941 32 100.0 35 ................................ CCTGCTTATCCGGCTAACGAGGTGAATGTTCGCTC 132008 32 100.0 35 ................................ ATCAGATAGCCGGCGGGCTGAACATAAACGTAAGC 132075 32 100.0 35 ................................ ATTAACTCGTTGCGAATTTCAGACGTTTGAGAAAG 132142 32 100.0 35 ................................ TTTGTCGATGAACTTAAAAGAGCGTTAGCGGCGGT 132209 32 100.0 35 ................................ TTGTGGTGCCACATTTTCCTCGAACTGCGACACTA 132276 32 96.9 33 .............C.................. CGAGAGGCAGGTGAAACACATGAATACTGTGAA 132341 32 100.0 35 ................................ CTGTCCTTCAACGAACTGAACCTCGATTTTAGCAC 132408 32 100.0 35 ................................ CCACCATGATCTCTAATGTCTATCATCTTTACACC 132475 32 100.0 33 ................................ CATTGTTGTTACTTTCATACGGCCGAGCTTTAA 132540 32 100.0 36 ................................ AAAATTAAAAGGACGGTCAGCAACAGTGACCATCCC 132608 32 96.9 34 ....................A........... TGTGATCGGGATTGCGCCTTTGCCATGGGCTCCA 132674 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 99 32 99.9 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : TCTAGATGAATATCCTCCATTTTTATGGAAGTAGGTGAAATGTTTGTTAGTATTAATCACTTATGATGTAAGCACTACTAACAATTCCGGGCAAAAGCGATTACGAAAAGTAGCAAAAACATGTCAAAACTATGGTCAACGAGTCCAAAACTCAGTATTTGAGTGCATTGTAGATGCTGCACAATTCGCTGCACTAAAAATTGAGCTAACTAATATTATCGACAAAGACCAAGATAGCCTTAGATTTTACCAGTTAGGCAATAACTACAAAAATAAAGTAGAACATATCGGTGTAAAAGAATCCATCGACATAGAAGGACCTTTAATATTTTAGTGCGAACCTATAGTGCACATGAATTCCCCAGTGTATTCGCACCTGACATTTTTAGATTTTCTTTGTAATTTTGTAATATTTGTTACATTGTTCTTTATTTAATAAAGAAAATAGCGTATTTTTGGGCAGAAAAGGCTTTTTTCAAGCTTTTTGCCCAAAAATCGCT # Right flank : TTGATGGATGATGTCCATCGTCAGCAGCTCAATAGGACAATGTTAGTGCAATAAGAGTTATTGTGGTAATACGTGGATAAAAATGTTTCATCATACTAATTAAAAAATCATTAGCATATTCTTATTATTCTTTAAAGCGTGCAATGATGAAAGCATATAAGAGTGGTATTGCTTGTGCATAGCAGTGTCCCTTCTTTGTGGTGATACGCGACAAAAAGAGGCTGATATATCGGGAACAGGTAAAGTAGATGATTCATTTGAGGAACCTCTTGTCATGGAGATAACTGGAGATATTATCATTGATATTAACGATGGACATAATAATTTCGATGCATTCAGAATACTAAATGAGTCGGATGTTTTCGAAAAGGTGCAAGGCATTCTTGATAATGATAATTAGAAAATAGTGGAATTAAGTATGAGCTGATCTGCGGATTATCGTGCCGAAATTGTAGATAAGAGGGATAAGGAAAAGTCAGTAACAACTTTTTACTATCTTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //