Array 1 752211-753299 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054705.1 Salicibibacter cibarius strain NKC5-3 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 752211 32 100.0 34 ................................ CGTCCCCGGAATCGAGAACGTGATATGATTAATC 752277 32 100.0 34 ................................ ACATGTCTGACTTCAGATTCAAAATGTCCGTAAA 752343 32 100.0 34 ................................ TTTGAGTCCCATCCACAACATCTCCTTTCATGCG 752409 32 100.0 33 ................................ TTCATCTTCCAGATTGGTGTCCGTCCGGAAGGC 752474 32 100.0 36 ................................ AGAGGGTGTAATTACGGCTGTTTCCTCCGGATCAAC 752542 32 100.0 32 ................................ ATGACCATGTGCAAAGGCTCCAATTTGTTTTG 752606 32 100.0 34 ................................ CTCTGGTTCATATTGAGCATTTGCTTCAAAACCC 752672 32 100.0 34 ................................ AGCGATAGAATTGCCCTTGACCCTGATAGTTATA 752738 32 100.0 33 ................................ CCAAATGTGGGAGGGCATCAAAAACATCTTTTT 752803 32 100.0 34 ................................ GTTTCCGGGGAAATGACAGCGAAGGCCAGATTAA 752869 32 100.0 33 ................................ AACAAGGTTCATACCATCAACGGTGAGTTTCGA 752934 32 100.0 34 ................................ ATGAGTTGGAAGAATCAAAGCGCAACACATTGGA 753000 32 100.0 34 ................................ ATCAGTATGATCAACTGAAGGAAGTCTTCCGAAA 753066 32 100.0 34 ................................ AGGTAACGGGAATGTCTACGGTATCCATATTGAA 753132 32 100.0 35 ................................ TCTATGCTCATTGGCACACTCCCCCAGCTCCACCT 753199 32 100.0 34 ................................ CACCATACGAAGAACTTGAAGCAGAGAATGTCAA 753265 31 90.6 0 .....................A...G.-.... | A,TCT [753283,753286] ========== ====== ====== ====== ================================ ==================================== ================== 17 32 99.4 34 GTCGCACCCTTCATGGGTGCGTGGATTGAAAT # Left flank : CGAATATCCCCCGTTTTTATGGAAGTAGGTGAATTATCGCATGCTCGTTTTAATTACCTATGATGTCAGCACATCAAGTATCGGAGGAACAAAAAGGCTACGAAAAGTTTCAAAAGCATGCCAAAACTATGGACAACGAGTACAAAATTCCGTTTTTGAATGTGTTGTAGACTCCACTCAATTTGCGGCTTTAAAAATAGAATTGACAAAAATCATTGATGAAGAAGTGGACAGCCTTCGTTTTTATCAACTGGGAAACAATTATAGAAATAAAGTTGACCATATTGGTGTGAAAGAAGCGATGAATATGGAGGACCCCTTAATTTTCTAGTGCGAATGTGAAGTGCACATAAAATTACGGGAGGGTTCGCACCTATTATTTACTATCTACGAAGGTTATTTTTGATAATTATGCAAATGTAGGTTCGATTATTAAACAAAACAAAGCGATTTTCATAATAAATACTTATTAATTTAACAGATTTTAGTTGAAAATTGCC # Right flank : TTTGATCATATGCCTTTCATCGGAGAAAGATACCTGATATATTCACAGAAATTCGCAAATGAATGATTAATCCCCTGATCATAGGGCATACAGCTGAAATGAATGTTCATCTAATAAATGAAAAAAGAATCCGTTTCTGTTAGAGTTAAATCAAGGAAAAAATAACCACAGAAAGGATTCTTCTGATGACTACTTTAACGCAAATAACCCTGGATTTCAATCGCAAAATGAAGCTGTCGAATGATGGAGGTGCTCTTTCCTCTGATACAGGTGAGATCTTATTTCGAGAGTTCGAGGAAAAACTTGGTTTCTTTCGCACCTTGGATAAACATCTGGATCTGAAAGACGAAAGACTGTATCATTTTCATTCGAATGAGCAAATGCTTCGACAAAAAATTTATCAGATGATTGCCGGCTATGCTGAAGATGATGCGGCGGATAAATTAACAAATGATCCTGTGTTTAAGCACATCATTGAAACGGATGCGTTAGCCTCTCAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTCATGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 758554-759049 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054705.1 Salicibibacter cibarius strain NKC5-3 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 758554 31 90.6 34 C...-.G......................... CATTTCCATCAACCTGATATTTCACCGAGCGAAG A,TG [758556,758562] 758622 32 100.0 34 ................................ TTTCAGATGGCGCAAGCGTAGCTATTGACGGTCT 758688 32 100.0 35 ................................ ACACGTAAGAATCACCCACGGGCATGACAATAACG 758755 32 100.0 34 ................................ TAAGATGCCATCGTCGTTTTCTTGATAATCAACA 758821 32 100.0 34 ................................ AGTGGTCAGGATTAAGGTCATCCGGAGAGAATGA 758887 32 100.0 35 ................................ TCGAATACGAAACTTGCGAAGAATGGGGCGATGTA 758954 32 100.0 32 ................................ AACGACCCTACCAGCATTGACGATTTTCAAGG 759018 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 8 32 98.8 34 GTCGCACCCTTCATGGGTGCGTGGATTGAAAT # Left flank : TTCTTTAATAATTCTTGGATGATGTAGGTTCGGATGTGTTCCAGTTCTTCGGGCGATACTTTCATTAAAAAGTCATTGATCGTGTCGTAGTTCGGGAGTTCGTCCAGGCTTTCCAGACGCAATACCTTTTTGATGTTTTCGATACATTCGTCTCGGTTTAATCGATGGCTCATCTCTCTCATGCTTTTACAATTCGATGCATTTTTGACAATGATCATTAGAAGAAGGAGATCGGTCCCATACGTCACATAGCTTTGATGTCTGGGATCTTTCACACGTTTTAACTTTCGATCGAGATTCTTACAGAAATGTTCCTTGATTTTTACGAACTCGAAAAAATAGTTCGTGTCCTTTTCAAACTCCCTTTTTTCCTTCCTTGTCACCATTTCACATTCCCCCTAGAATACGCCTTATAGAAGTGTTTGGTATACTTCATTATACCATTTTTGGCATATTCTAGAGGTCTATTTGATAGAATTTAGCACGAAAAATATTTAATC # Right flank : TACAAAGCGGTTAGAAAGTCAGACAGCATTACCCGTCGTATTATGAGACGATGACGAAAAGATTCATCGCGAAACTAAGGTTTTAGCACTCTGCAGTTTTAGGTAGAGATTAAATTAACATAAACTGTGCATAAGGGGCTTCCTTGCCCCTTTCCGCTACATCATGCCTTCGATAATATTCTCTAGATGCGGCACATGCCCTTTCAATACCCGTACTTCATAGATATCATTTTCCTCATAATAAACAAACCTGCCGTTATTAAAATCCGTTTGAATATGTTTATAAAACACGCCTTCGTGGGTGGCGGTGGTGTCGTTATGGAAGGCGAGGTTGTATGTCCCGTCTTCATTTTCATGCAAATAGGCGTTTACTCCATGTTCGTAGTCCTTTTCCCCACCTTCATGATGATGGGGGTGCGGCACAACTCTCACATCTGCATAAGGGAGATCCTTTAACAAACCATCAAGTGTTGTGTTTCCCAGGAAGCGCCGCCAAAGAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTCATGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //