Array 1 275-2 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWRU01000045.1 Corynebacterium diphtheriae strain 54/E Scaffold_55, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 274 29 100.0 32 ............................. GGCGGAGTCGGCGTTCAGCGATTTCTTTCCTT 213 29 100.0 32 ............................. CTAATCTTGACCTGCACAAGGCCGCGGTCATC 152 29 100.0 32 ............................. CTAATCTTGATATGCACAAGGCCTCGGTCATT 91 29 96.6 32 T............................ AGATATGTTCGGTGACTGCTCAACCAAAACAG 30 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 99.3 32 GGAAATACCTCCGCGTGTGCGGAGAAGAC # Left flank : ACCTTAGCTTTGGGACATCCTAAGTA # Right flank : CA # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAAATACCTCCGCGTGTGCGGAGAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 1 215278-215855 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWRU01000001.1 Corynebacterium diphtheriae strain 54/E Scaffold_1, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 215278 29 100.0 32 ............................. TCAGCAAATAACACCCGTGGATGGTGCTTTAA 215339 29 100.0 32 ............................. CTGCGCGGTCATCCGAGGACCCTCACAAGATT 215400 29 100.0 32 ............................. GCACAATGGAAACCCGTCGAATCCTCGAAGAC 215461 29 100.0 32 ............................. ACCATTCATATGCGGCCCGACAAGCCTACGTG 215522 29 96.6 32 C............................ CCGCTACCTTAGCTTTGGGACATCCTAAGTAT 215583 29 100.0 32 ............................. GGCGGAGTCGGCGTTCAGCGATTTCTTTCCAT 215644 29 100.0 32 ............................. CTAATCTTGACCTGCACAAGGCCGCGGTCATC 215705 29 100.0 32 ............................. AGATATGTTCGGGGACTGCACAACCAAAACAG 215766 29 100.0 32 ............................. ATTGGCGAGTAAGCTCCTCCAGCGGCTTGCCT 215827 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 10 29 99.7 32 GGAAATACCTCCGCGTGTGCGGAGAAGAC # Left flank : CCCGGTGACGATCACGCGCATGCCCTTGGTGAGGGATTCTGCAACGTTTTCGGCAGCTTGGTGCCAAATGTTGCACTGCAAGAAAACCGCGTCACCATCTACCCACTGGTTCGACCGGGAGTCGTACTTCTTGGAGGTAGAAGCAACACGGAAGCTGGTTACTGCTACACCATTAGGGGTGAAGCGAAGTTCTGGGTCTGCAACGAGATTACCAACAATGGTGACGTTGACTTCGCCTTGTGCCATTTTCTTTGTCCTTTGATCTAGTGCGCGTTGAAGGTATGCGCGCCCCACCACGCAGCACTTACACTGCTTCTTCTATAAGTTCCCGCACTTGCCCATCTTCAATCACAATGCCATGTTCACCGGTTTCATCAACCAGCTCAACCCACACCTGGAATCCTGTTTCTGTCGCAATATCGGAGAGAATCTTCTGAGACTCGGAGTCCATGAGCGAGCCATCAGACACACGCATCACACGAATATTTGGATTGCCTGCC # Right flank : CACTAACTGTACTGCAGTTTTACTGTAGGCCATGTAATTTTACAGCGGCTCGTCCAGGGCGTGAAGCCAGGACGGATAACCCATCTGCATCAAGAACTTGTAGTGTGCTATCACCTGTCGTCATTATTGAGAAACCTTGCTCACGAGAATTATCGCTCACAATCATTGTGGCATGAGCATCTTTAATAGCTTCTGTTACACGAATCCATAAGTTTGAAGCTACGTTTTTGGAAACATTTCCAACATAGATGCTTGTATCCGCTTCAGTAAGGAAACGGGTGACGTAACCAAGGAGATGATCAGGTGCTGCCTGAAGGTAAAGTACAGCGAACATCTAGTTAATCTCCTTGCCATACTGTATGTGCCCTTTGACTTCGTCACTGTCGCCGATTAGCCGATCGTCATTACGATTTGGAAGATACGGTGTCAGCACCTCCATTAGTGCTTCGAGCATACCTGCCATTATTTTTCTTGAATGGATCTCACGGCGGAGATGCCGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAAATACCTCCGCGTGTGCGGAGAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.20,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //