Array 1 151617-149369 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGPC010000021.1 Streptomyces sp. ISL-99 ISL99_22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 151616 29 100.0 32 ............................. GAAAAAACCGCATGAGGAACCAGCACGACGAC 151555 29 100.0 32 ............................. ACATAGCCCTGGAACTCCAGGAGCACCTACTG 151494 29 100.0 32 ............................. TGGTCGTGCTTCCCGTCCGGGTGTTCCACGGG 151433 29 100.0 32 ............................. TCGAGGGGCATGACGGCAGCGTCGGCGAACGT 151372 29 100.0 32 ............................. GTGGAGCTGGCGGTGCTGCTGCGCCTGGTCGA 151311 29 100.0 32 ............................. CGGGCGCGGGAGGAGTTCGCGCATGCCTTGTC 151250 29 100.0 32 ............................. GCCGCGGTCGCCCGGGTGCTGGGCTCGCGGGC 151189 29 100.0 32 ............................. GACAAACGCCGGATCCTGGGCGGCACGTTCGT 151128 29 100.0 32 ............................. CAGTGTCCTTCGGGGGCCATCAGGGCGGCGGC 151067 29 100.0 32 ............................. TCGAACTTCCCCTCGCGGAACCGTGGCACTGC 151006 29 100.0 40 ............................. TCCACCCATGGCACGTGGCCACGGCCGGATCCCCGAGTCC 150937 29 96.6 0 ............................T - Deletion [150909] 150908 20 69.0 32 ---------.................... ACCACCGTACTGCGCTGGGCGATCGTCCAGGG 150856 29 100.0 32 ............................. GACGGCGAGGTTCCAGTGAGCGCCCAGCGGAT 150795 29 100.0 32 ............................. GCCACAGGTACCCCGCACCCCCGCGACACCGA 150734 29 100.0 32 ............................. ATCACGACCCGCGTGAACATCATGCTCCGCGA 150673 29 100.0 32 ............................. CCTGCGAACTCCCCACACGGCGGCCGCCGCCC 150612 29 100.0 32 ............................. GCCGGGCAGCCGGGATGACCGCCGACGACCAC 150551 29 100.0 32 ............................. CTGCCGGAGGAGCGGAGACGCCCCCCACCATG 150490 29 100.0 32 ............................. TCGGCGAAAAGTTCGCGGGCGATGACGTGAGA 150429 29 100.0 32 ............................. ACCGGATTCAGCGCAGCGGCCGAGGCCGCGAA 150368 29 100.0 32 ............................. CCGCCGCCAGAAGCGGCCTCGGCGCCGACACG 150307 29 100.0 32 ............................. CGCGCCCGCATCGACGTCGACACCTCGGGCGC 150246 29 100.0 32 ............................. TCCTGGGACAGGCTGGTGATGCGCTGGTCCGT 150185 29 100.0 32 ............................. CCGCTGCAGCTGCCGCGAAGCAGCTGGCTGAC 150124 29 100.0 32 ............................. CAACGATGCCCCACTCGTCCGCACCGAGGGAG 150063 29 100.0 32 ............................. CGCGACATGGGCCGCTACCGGCAGCAGTACGT 150002 29 100.0 32 ............................. ATGCTCGCCAACAACGGCGTCGGGGGCCCCGT 149941 29 100.0 32 ............................. CGATGGACGGGCCCCGACGGCGGCCCGACAGG 149880 29 96.6 32 ............................C TGCTGATCCGCCTGGGCGAGATAGGCGAACAC 149819 29 100.0 32 ............................. GCGGCTCGGGCGCGTGCGGCCTGGTCCCGGAT 149758 29 100.0 32 ............................. GCCCGCGCCATGCTCGGTGAGGAGCAGTACGA 149697 27 93.1 32 .....................--...... CGCGTGCCGTAGGGGCCGTTGACCGGCTTCAG 149638 29 96.6 32 A............................ TTCGCACTGTGGGTCCTCGCCGGGTACACCGC 149577 28 96.6 32 .................-........... TCGTCGCCGTCGATGGGGTGGGTCTCGGCCGT 149517 29 100.0 32 ............................. CTGGTGGAGCGCTCCTCCCGCCTGTCCTCGGC 149456 29 93.1 32 ...T..........G.............. GTGCGGCGTCAGTCCACCAGCACGGACACCGG 149395 27 89.7 0 C.....................--..... | ========== ====== ====== ====== ============================= ======================================== ================== 38 29 98.2 31 GGTGTTCCCGCGCGAGCGGGGGTGGACCG # Left flank : GGTCAGTCTCTGGGATCCCGAAGTGGGTTCAGTTCCCGCAGGCACGAACTACGCGAACCTCGCCACAGACAGTCAGAGCGAGCCTGATACAGACGACGATACGACGTAGGACAGCGAGCCTCGCCCACAGCCCACGCCCCCACCACTGAAGCCGAAGCCGGTGAAAGATGCCCTCAATGACCGTCCTTCACACCACGGCCGTCCCGGAACATGTCCGCGGAGCCCTCACCCGCTGGCTGATCGAACCAACGCCCGGCATGTATGTCGGAACCCTGTCCGCCCGCGTGCGCGAAGCCTTATGGGCGGTAGTGAGCGACTCCCTCACAGACGGCGCCGCAGTCCTGATCTACCCGGACTCCAACGAACAGGGGTTCACGCTCAAAACAGCGGGAGAACGCCGCCGCATCCCTGTCGATTTCGACGGTATTACCCTTATCGCCTTCCGCCCAGAGGAATACCAAGAAACGGCAAACCCTTCGTAGAAGCCCAGGTCGCGAAGG # Right flank : CCCTCGGTGCTTTGCCGAACACACCGCGCAGCTTCCCGGCGAAGTCGCCCTTCCGATACGGTGCGTAGCCCCCAGCCTTGCCGGGAGGGCGCCTGTCACCAGCGGTGATACCCCTCAAGTGCGGCCCTCCCTGGGGAGAATCTGGGGAGAATGAAGCCCCGCTGGGGAGCGCCTGGGGAGAATCGACCGCGTAAACGGACAGTCCGGTGAAAGCATGGGAAAGACTTATCGCAGCAGGTCACAGCGCCTCACCGACTGATTTCCGCAGGTCAGCCCCACGGGGGCGACGACTTCAAGAAGATCTCGTCGTGGGCCGCCATCCTGTTTGCACCCACACTCGTGGGAACCATCTACGGCATGAACTTCGACCACATGCCGGAGCTGCACTGGGCGTCCGGCTACCCCTTCGCGATCCTGCTGATGGCGGTGGTGTGTACGAGCCTGTACGTAATCTTCAAGAAGCGCGACTGGCTGTAGGCAGCACGGCGGATGCGCTGATC # Questionable array : NO Score: 3.09 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTGTTCCCGCGCGAGCGGGGGTGGACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.70,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 2 162132-166657 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGPC010000021.1 Streptomyces sp. ISL-99 ISL99_22, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 162132 29 100.0 32 ............................. CCCGGAGGCGGAGCTGGTGGCGGGCGGCGGCT 162193 29 100.0 32 ............................. GCGCGCACCGCGGTGGTGTCGTTCAGGGTCTC 162254 29 100.0 32 ............................. GTCCGCGACGACCGCAAGCCGCACGGCGAGTC 162315 29 100.0 32 ............................. AGCACCAGCGGCTCACCGTCGACAACTACCTG 162376 29 100.0 32 ............................. ACGGCTGCGTCCTTGACTAGGGCCCGCTCCCG 162437 29 100.0 32 ............................. TTGGCCGGGTGCACGCACCGCGCGAAGAACTG 162498 29 100.0 32 ............................. GCACGCCGCGCGATCCTGGGCCGCGACCCGGC 162559 29 100.0 32 ............................. GGCACCCGCGGGGACGACCAGCCGGTGCGCAA 162620 29 100.0 32 ............................. TCGCCGTCCGATGTGACGGCGGCGACCTTCAC 162681 29 100.0 32 ............................. GTCCGCGACGACCGCAAGCCGCACGGCGAGTC 162742 29 100.0 32 ............................. ATCGGCCCGGTCATGCGGATGTCGACGCTCAT 162803 29 100.0 32 ............................. AGGGGCGCGAGGTAGTCGGCCCGGCTGACTTC 162864 29 100.0 32 ............................. AACCTTGCCGGGTATCGGCGGGCCGATCTGGA 162925 29 100.0 32 ............................. CTGGATCACCCGCCGCCCCTCCCTCCACTCCC 162986 29 100.0 32 ............................. ATGGAACCAGCAGGTCAGGACATGACTGTGCC 163047 29 100.0 32 ............................. GCCCTCAACAGGCCACCAACCGAGCACGCCAA 163108 29 100.0 32 ............................. TTCGGCGACCAGCGCCACCCTGACGGCACCGG 163169 29 100.0 32 ............................. CCCGCTGGAAAGACGACGAGGGGCAAAAGCTC 163230 29 100.0 32 ............................. GAGATCGAACGATGGCAAAGAGCTTGTCCGGG 163291 29 100.0 32 ............................. ACTTGCTCGGCGCGGTGGCGGGCCATGTGGGC 163352 29 100.0 32 ............................. AAGCTCAACACCAACACCTGGCCCACCAGTCC 163413 29 100.0 32 ............................. CGCAGGTAACTACGCGGCGAGATCCGCAACGT 163474 29 100.0 32 ............................. TACCGCCTGACGGACCGCGAGGTCCTGCGCAC 163535 29 100.0 32 ............................. ACGCTGGCGAAGATCGAGGCGGCGACGCTGCG 163596 29 100.0 32 ............................. ATCCGGTTGCGCTCGCCCTCCGGGGCCGTAGC 163657 29 100.0 32 ............................. CCCTTGAGATCCGCACCCCCAACGACGTGCCC 163718 29 100.0 32 ............................. TTCGGCACCTTTGCCCGTGAGTGGATGAAGGC 163779 29 100.0 32 ............................. TCCCCTTGTCGAACACCGGCCTGTTCACCGGC 163840 29 100.0 32 ............................. CTACCCCCGGAGCGGAAGCTCGCCGAGACGTA 163901 29 100.0 32 ............................. CGACGCTCTCGCGTGCTGGCATTCCTCCAGAT 163962 29 100.0 32 ............................. CCGATGCGCGCCGCGCGCCGTGGCTACGAGGT 164023 29 100.0 32 ............................. GTGGAGCAGCAGGAGCAGGCGGAGCCGATGGA 164084 29 100.0 32 ............................. GCCGGACACATCCGCCGAGTAACCGAACAGGG 164145 29 96.6 32 ............................T TCTTGTACGCGTAGATCACCGCGGCGACAAGC 164206 29 100.0 32 ............................. CTCCTCGTCACCCCCGAGCCGGCGATCCTCAC 164267 29 96.6 33 ............................A GCTCGGGAATCGTGGCAGTCATCGCAGCACCAC 164329 29 100.0 32 ............................. CCAGGCAAACCTGGGGCGTCAGGCGCTCCAGG 164390 29 100.0 32 ............................. CCGCCCTACCTCGTCAACGTCATCGGCATCGA 164451 29 100.0 32 ............................. CAATGGACGCCCATCGCGTCACGGAGTCCCTC 164512 29 100.0 32 ............................. CAGCGGGTGTCGGCTGTCGAGTCGACGCCCCT 164573 29 100.0 32 ............................. TACAAGGGCGTTCCGTACCGGCTCGGCGGCAT 164634 29 100.0 32 ............................. CTTCACCGTGTGCGGGTCGCCGAGGTTGCCGT 164695 29 100.0 32 ............................. GCGGTTCGGGACGTTCCGAAGCCGCGGCGCAA 164756 29 100.0 32 ............................. CCGAATCGCGCACGCTGACCGACCAACCGCAC 164817 29 100.0 32 ............................. CTCGGAGTGTGGGGGCGCAGGGTCCGGGACCG 164878 29 100.0 32 ............................. GACAACCCCGAGGCCCTGATTCGGGAGGGGCG 164939 29 100.0 32 ............................. CTTGGCGTTCGACTTGTCTTGCGCGACCGCCT 165000 29 100.0 32 ............................. GTGCGCGAGGTTAAGCGATGTGCTGACCTGCG 165061 29 100.0 32 ............................. CGGCGAACGAGGAGTCGACCACATGAGCGAGC 165122 29 100.0 32 ............................. TAGGCGGCGAGCGCTGCGGCGACGAGCGGGGA 165183 29 100.0 32 ............................. GCGAACATGTACGGCGGGGCGCCGGAGTCCAC 165244 29 100.0 32 ............................. AGCCTCGTCATTCAGAAGGGCGTGCCGCTGAC 165305 29 100.0 32 ............................. CCTTGCCGATGAAGTCCTTCGCGTCCTCGAAA 165366 29 100.0 32 ............................. GCGTCGTTCTACGTGACGACCACGGCCCGCGG 165427 29 100.0 32 ............................. GACGCTGCTGGCCGGACGGTGAACCCGGGGCC 165488 29 100.0 32 ............................. CAGCAGATCGAGCGCGTGTCGCTTATCGCGGC 165549 29 100.0 32 ............................. CTGCTCCGCTCCACCGAGGACGCCCTCACCAC 165610 29 100.0 32 ............................. CCGTGGGACTGTCAGCCCGTGGGGCGAACAGG 165671 29 100.0 32 ............................. TGTCCATCGCGCTCGCAACGAGCGTCATGGCG 165732 29 100.0 32 ............................. CTGGAGCCCTCCACCCCGACCGGGTTGGCGAT 165793 29 100.0 32 ............................. TTGGCTGATAGAAGGAGCGGCCCGGTCGATTC 165854 29 100.0 32 ............................. TCATGGTGGAGCGGGCCCCGGACTGGACTCGC 165915 29 100.0 32 ............................. AGCTTCAAAGCCGACCTGGCGGGCTCTGTAGA 165976 29 96.6 32 ...........A................. TGGGCCAGCTCCACGGCGCTCGCGCGGCCCCC 166037 29 100.0 32 ............................. CTCAGCCTCGACGTGCTGGCAGCGCTGATCGA 166098 29 100.0 32 ............................. ACCAGTGGTACAGCACGAGCGGCCGCCGGCCC 166159 29 100.0 32 ............................. GCAGGTAACCCCATGGCCACCGAACCCGAACC 166220 29 100.0 32 ............................. ATGGTCTCGCGCTCGGCGTTCCGCATGCCGGG 166281 29 100.0 32 ............................. TGAGCACCGAGACCGAGCCGCTGACAGTCCCC 166342 29 100.0 32 ............................. AACCCGCTGAGCACGGCTCGCCGGTCGGCGGC 166403 29 100.0 32 ............................. TAGGCGCCACGGCGTTCAATTTGGTCGTACAG 166464 29 100.0 32 ............................. TCCACGCTGTGACGGTCGGACGGCTTGAACGA 166525 29 100.0 10 ............................. CCCCCGGGAC Deletion [166564] 166564 29 82.8 32 CGAAG........................ TCGGGGCAGCAGGATTTGAACCTGCGGACGTA A,G [166566,166577] 166627 29 96.6 0 .........................G... | TT [166652] ========== ====== ====== ====== ============================= ================================= ================== 75 29 99.6 32 GTGCTTCCCGCGCGAGCGGGGGTGGACCG # Left flank : GCGGAATGACCCTGCTCGTGGCAAACTCGTGACGCACCGTCTTGGACGTCTCTACGGACCAGTCATGGGCAAAGGACGGCTCTCCCAAGAGAACCCGCTGTTCAGATCGCTCCCGTGTGATCATGCGCTGGAACCGAGGCATGATCTTCCCAAGATCATGCAATCCGGCCCAGGTCATGACCAGCGTCCGGGCTTCTTTCTCCTCCGTCTGGAGCCCCTCAGCGATCCGCGCGCGTTGCACTGCGGTCAAGGTCTGATCCCAGAGCGCCCCGCACACCATGGCGGTGTCCACCAGGTGTGCGATGACGGGATAGGGCTCCTCCAAGTCCCGTGACTTCGCCAGCAACCGAACATCAACCATGCTGCCCCCATCGCACCATTCCGTCATTGTTACGGCAAGGGAGCACTCAAGCAGACGCTTCTGACAATATGGGTTGATGCAGGTCCAGCGCCTACCCCAAGAAATGGCAAAGGGCTTGGAACGTTGCAGGTCAGGAAGT # Right flank : GTGTCTAACACCCGGCCACGGTCATAGACGGCCGCTGGAGAGCCGGGAGGGGGGCCGAGCTTGAAGACGCGGGCCGGGCCAGAGGACCCCAGGTCCTCCGCCGCGCTTCCCGGTACATGGTCGTCGAGTGATCCACGAGGCGGTTGCGTAGGTTTTGAGGGGAACCCGTCGGCGGGCTCCAGGGCTTTCACCGGTTCTACCCACGTGGTATGGGGCAGCTCGATGAGCAGCGCTGCTCCCGGGCCGGCCTGCGGCCATGTTCAGCACGGCCGATCGGCGGGCTGACCGTTCCCCGAGCCGACGCTCATGGAAGGGAGGCTCTTCGTTGAAGAGGCCAGGCGTTTAGAAGGCACTTCCGAAGACCCTCGCGGAAACAATCCTGCCCTCACCCGGCGTTGATGATCTCCGAATCGAGGAGGGGAAGGTGTCGGGCCTGAAGTTGTTCCGCACGAACACGACGAATAACGGCGTGAGCGAGGTTACGCCGCGTCTTGCTGGGG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTTCCCGCGCGAGCGGGGGTGGACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGAGCGGGGGTGGTCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.70,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 5544-5334 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGPC010000057.1 Streptomyces sp. ISL-99 ISL99_58, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================== ================== 5543 27 100.0 34 ........................... CGATCGCAGCACTTGCCATGCGGCCCGAGGGCTG 5482 27 100.0 34 ........................... CGCCGGATCGCAGTACCAGGTGCATGAAGTCCAC 5421 27 92.6 34 ............T...T.......... CGGACCTCGACAAGGTGCGCGCCCTGCAGCGCCA 5360 27 96.3 0 .......................C... | ========== ====== ====== ====== =========================== ================================== ================== 4 27 97.2 34 GTCTGCTCCGCGCAGGCGGAGATGGCC # Left flank : AGATCCACCGGCAGCCCAACAGCCATCAATTCCGCTCGGCGGCAGCTATCCAGGCCGGCGAAAGACGGCGTCGCCTTCCCCAGATCATGCGAAGCGGCCAACCACACCAACCGAACACGAGCCGACTGGGCATCCTCCGCCAGGTCCGCAGCGAGCAACCGGCGAACCTGGAGCGCGAGAAAGTGATCCCACAACCAACCACCCGCGTGACCGCTGTCCCACACATGCGCGATCAACGAATGCCACAAAGCTCCGGGCGGCGTATCCGGCGCCCAACGATTCCGACGCCACGTCTTCGCCCACAAGAGCCGATCCACGTCAGACAACTTCGACATCCAGCCTCCACGTCCTCCCGCACAGTCCTACCGGCAGCCTCTGACAGAGGACAGCAGAAATCCCGCACGCGCTACTGTGACAACCATGGCCGTCTCTCCCGAAGGCTGGTCTTGCACTTTGATAAACAAACAGCAAATCCGCCACAGAAGGCCAGGTGAAAGAGG # Right flank : AATAGGGCGGGATCTTCCTTGGCCCGCTCGTGGGATGCGCGCGCGTGGAGATCACCCCGACGGCATAGGCCCCGGCTGAGCGATGATGGTGCAGCGGATGGGTCCGTCCCGGACGACGTGTTGAACGCTGTCGTGATGGCGATGGTGGACTGGGTTTGTTCACCCGGCAGACTGGCCCACCGGACGCAGGTGGCCAGCCCGCAGAGGCCGTGGCGGTGCAGTTGTCGCACCCGCCCTCAGCTGGTCGCCTCCTTGGCCGAGTAAGTGGCCAGAGTTGGCCGGCTTCCGCTCCTGGGCAGCCTGGTCTACACCTTGCACGCGGACGCCCACACCGTGCACCGCAGAAATTCTGTCCTAGCGGCTGCGCTCTGGCTGACTTGTTTGCCGTGTCCGATGATCTTTCCGCCCCTGTGTCCGGTACTCCTAGCTGGGTCCTCCTCGTCGGTGACTCCACCGATTCCGGCCAGAGTCTCAAATAGCCTTGCCGGGACAAAACGCTC # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGCTCCGCGCAGGCGGAGATGGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.60,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 2 13625-14806 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGPC010000057.1 Streptomyces sp. ISL-99 ISL99_58, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================================================= ================== 13625 29 100.0 93 ............................. ACGAACGGGTTCCTCGCCGATCTCCACATCGAGTCCGCTCCGCGTACACGGAGATGCTCCGGGCGGTCACTTCGGGCACTCCCAGGTCCCTGG 13747 29 100.0 32 ............................. CAGGGCAAGCGGCTGCGGGCCGAGCCGATCGC 13808 29 93.1 32 .GG.......................... CACTGTGCGGCGTTGAGTGGGAGGATCCGTAC 13869 29 82.8 33 ............C........G.TT.T.. GACCCCCGCGCCGTCGTAGCCCTGCTGCCCGCA 13931 29 82.8 32 C.T........C...........A.G... TTCGGCTCGCTGTTGAACTTGAGGGAGCCCTC 13992 29 96.6 28 .........................C... TCGTGCAGTCCTCGACGTACACGCCCGC 14049 29 89.7 32 ............C....A......T.... GCGGGTATCCTCGGCCAGACCGCTGGTACGAC 14110 29 89.7 32 ...T.........CG.............. ATGGCGAACTTCCTGACGGTCTACGGGGGTGG 14171 29 89.7 32 ........T.....A.............A TCCTCGACCATGCACGGATGAATCGGCACGCG 14232 29 89.7 32 ....C..................TT.... TAGAACCGGCAGTAGGTAGAGTTCGGCGCAGT 14293 29 82.8 32 .G......G.....T.T.......T.... TGGGGCGCGACCTACATCGGTTGGACGCCGCC 14354 29 86.2 27 A..........AA........T....... TCGATGGCCGCCTTCGCCTCGCACACG 14410 29 86.2 32 A..G.................G..T.... TACCAGGCGTCCGATTCCTTGCCGCCCTGGAT GC [14415] 14473 29 72.4 32 ..TT.........G......AGC.T...A GAGCGCCCGACGCGTCAAAGGACGTGCAGGCA 14534 29 72.4 32 .AT.......TAA.T......G......T TCCATAAGGTTGTCGACGACGATCACAGCCGG T [14548] 14596 29 86.2 32 T.T....................A..T.. ACCAACCAGCGCAACATCCAGGCTCGGTTCAA 14657 29 93.1 33 ............A..........A..... TGGACCTCGGCGTAGGTGGACTGCCACAGCAGG 14719 29 93.1 31 .A..........A................ GGGTCCGGCGTCCACGCCCCTGTGCAGACAA 14779 28 93.1 0 ..........A...-.............. | ========== ====== ====== ====== ============================= ============================================================================================= ================== 19 29 88.4 35 GTCCGCTCCGCGTACGCGGAGATGCTCCG # Left flank : AACAAAGACCTACACCCCACTCCTCAACCACATCCAAAAAGGCCAGCGCTACGCCTTCCGCCTCACCGCATCCCCCACACACCGCACCGCCTCCCCCGGCCCCAACCAACGCGGGCGCCGCCTCCCCCACACCACCACACACAACCAACTGCGCTGGCTCACCGAACGCGCAGAACGAAACGGCTTCACCATCCCCCTGGCCGGCAACTCCGACGACCTCGGACCCGACGGCGCAATCCCCCTGCAACTCCAACTACGACACCGCGGCAAGAACACCTTCGACAAACTCGACCACCAGGACAAACGCATCCGCGTCGCCCTCACCACAGCCACCTACGAAGGAGCCCTCCACGTCACCGACCCCGACGCCCTCCGCGCCCTCCTCACCACCGGCATCGGCCAAGGCCGCGCCTACGGCTGCGGCCTCCTCACTCTCGCCCGCCTTCCAGAAACCACGCAAAGAAACGGCAAAGCCATCCGGTAAGCGCAGGCCACAAAGG # Right flank : GCGTGCTCTATGGGCGATGCCCTCTCGGCGACGCCTGAATTCTGACCCTCTGACGGCGGATCAAAAGTGACCCTCTGGGTGGTCTTCGCCTGAACCTGATCTTGATCAGAAGGTCAGGAGGGAAGGGTGATCCGCGTGGAGGACTGGGCAGAGATCCGCAGGCTGCACCGGGCCGAGCAGATGCCGATCCGGGCGATCGCCCGGAAGCTGGGCATCTCGAAGAACACGGTCAAGCGGGCGCTGGCGAGTGACCGGCTGCCGAAGTACGAGCGTCCGGCCAAGGGCTCGGTGGTCGACGCGGTCGAGGTGCAGATCCGTGAGCTGCTGCGGGAGACCCCGACGATGCCCGCAACAGTGATCGCCGAGCGGATCGGGTGGGAGCGCGGGATGACGGTCCTCAAAGAGCGGGTGCGGGAACTGCGGCCTGCCTACGTTCCGGTCGATCCGGTCTCGCGCACGACCTATCAGCCGGGCGAGCTGGCCCAGTGCGACCTGTGGTT # Questionable array : NO Score: 4.58 # Score Detail : 1:0, 2:3, 3:0, 4:0.42, 5:0, 6:0.25, 7:-0.26, 8:1, 9:0.17, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCTCCGCGTACGCGGAGATGCTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCGCTCCGCGCACGCGGAGATGTTCCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.60,-10.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [13-37] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 17105-23762 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGPC010000057.1 Streptomyces sp. ISL-99 ISL99_58, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================================================================ ================== 17105 29 82.8 26 ..........TAG..........AT.... GAGAACCTGACGGGCGTAGCGCGCAC 17160 28 79.3 32 T.T........-C.G.........T.... ATGGTCTCCTGGACGTACTCCGGGGCCGGGGA 17220 29 82.8 19 .CT.........A.T.........T.... GACCCCCGCGCCGTCGTGG Deletion [17268] 17268 29 79.3 31 CCTT.................G.A..... TCGTAGACCATGGCGCGGATGGCACGTGTTG G,T [17274,17277] 17330 29 82.8 32 ..T....T....GT............T.. ATGGTGATGCCCGTCGAGATGATCGTCCTGAT 17391 29 86.2 32 ..T...........G......G......A AAGGTAGTGACGATGCCCTCCGCGAACGCGTG 17452 29 86.2 32 ..T..........G...........C.A. GCCGTTGAGATCACCGAGCAGGCACGGCCGAC 17513 29 82.8 30 A.........T..T.........AT.... GACCGGACGACTGGTCCACGGCGGCAGTCG 17573 29 89.7 32 ............C.T.........T.... TCGTACACGTCTAGGGCCTCGCGGATAGGCTG 17634 29 86.2 31 ...T........C....T........T.. GCGAACATCGGCGACCGCGCCCGCGGCGCCT 17695 29 86.2 32 ........G...C.A.........T.... GACCCCGAATTCGTTGCCGTGGACTACTCCGG 17756 29 93.1 32 A...........C................ TAGACGCCGCTGTCAGTGCTGTGCCGTACCGT 17817 29 96.6 32 ..............T.............. GCGCTGGGGATCCACTCGCCGTCGCGCTTGAT 17878 29 89.7 32 ............C....A.....A..... GGCGACGTCCTTACCTTCCCGCACCCTCTGTT 17939 29 89.7 31 .C.........C...........A..... ACCAACCAGCGCAACATCCAGGCTCGTGCAA 17999 29 100.0 32 ............................. GTGACGGCGCCGGCGGTGGTGGAGTAGATGCC 18060 29 93.1 66 ..............G.............T TGGGTCGACATCACCGCGGTGCGGAGATGATCCCAGCCATCCGCGTGCGTCAATGGGCCGTCCCGA 18156 29 79.3 32 ..G.......T...GA.......A....C ATCATGGCCGCTAAGGGAAGCTCGTCCCATCC 18217 29 79.3 30 .....A.....A.....C...G..T...T CCATGAGGTTGTCGAAGACGATCACCGCCG 18277 29 96.6 31 ........................T.... TACCAGGCGTCCGAGTCGTCCCCTCCCTGGA 18337 29 75.9 32 CGTT.........G.......G..T.... GCGAACTGACGGCAGCGCGCCACGAAGGCCAG 18398 29 82.8 32 ..T....G..........C.....TC... ATGAACGGCAGCCGCACGCGGTAGCAGTTCAG 18459 29 86.2 32 ..T.................T...T.T.. TACCTCGAACGCCCGCTCACCGAGCAGGCCGA 18520 29 93.1 32 ............C........G....... TCGGATCCGTGGACCTTCCCGCCAGTTCCAGA 18581 29 96.6 31 ...........C................. CGCGTGCTTCCTCCAGCGACGGAAAGCCCTC 18642 28 82.8 31 T..........A.G-.........T.... TACATCAACGAGATGACTGCTGCGCTGCGGG 18701 29 93.1 32 .GT.......................... TGGCAGATCCGTGACCTGTTCCCGAAGTCCAG G [18705] 18763 29 89.7 32 A......T......T.............. TGACCCCAGGTGATGCCCGTGCGGCTCTAGCC 18824 29 93.1 24 ....T...................T.... GAACCTGACAGGCGTGGCGCGCAC Deletion [18877] 18877 28 75.9 32 T.T.A......-C.G.........T.... ATGGTCTCCTGGACGTACTCCAGGGCCGGGGA 18937 29 86.2 22 ..T.........A........G..T.... AACCCCCGCGCCGTCGTGGCCT Deletion [18988] 18988 28 82.8 32 TG.T..-..............G....... TCGTAGATCATGGCGCGGATGGCCACGTGCTG 19048 29 82.8 32 ..T....T....GT..........T.... CCGAAGATCACCAGATACGCGGCAACGGCCAG 19109 29 93.1 32 .............G........C...... GGCGACACCGGGGCGACAGGTGCGCAGGGGTC 19170 29 93.1 32 ............C...........T.... GCGATGATCGAGGGCCAGACCTACCACCTGGT 19231 29 96.6 32 ..............G.............. AATACCTGCGCGCCGACGGCCGGGTAGTCGCT 19292 29 82.8 83 ...........AC.T......G..T.... ATGACCTCCAACGTGAGAGGTCAGATATCAGAAGTCCGCTCCATTGTTCCGTTCAAGGCCAAGATGGGCCGCGGCCACCGGGG 19404 29 93.1 32 ........................T.T.. ACGGTCGTGCACTGGGTGCCGATCACCCGCAA 19465 29 82.8 32 ..........A..G.A.......A....A ACGGCCGGCGGCGGCATCGGTCAGGCCATCTC 19526 29 93.1 32 ...T....................T.... TTGTCGAAGACCTCGGGGTTGAGCGGGGTGGC 19587 29 93.1 32 ...T........C................ ATCGGGGCGATCACCCACACGACCTGCCACAG 19649 29 93.1 32 ..T.....................T.... CCGTCCCAGTGGTGAATGAGCTTGCCGTTCAC 19710 29 96.6 32 ...A......................... ACCGTTGTCTTCCGCGGTCCGCGCACAGCCAG 19771 29 96.6 32 ...............A............. GCCCTCTCGAAGGCGCTCCCCGCCCGCCCCAA 19832 29 93.1 32 ........................A...C AGCCATCCGCATGCGTCAATGGGCCGTCCCGA 19894 29 82.8 32 ..........T...GA.......A....C ATGATGATCGCTAAGGGAAGCTCGTCCCATCC 19955 29 86.2 57 .....A.....A.........G..T.... TCCATGAGGACGCGGATATGTCTCGTGGGGTGCTACCTACATCGGTTGAACGCCGCA 20041 29 86.2 32 ..T....................ATC... CTGTGGGAGCAGCGATCGTACTGGCACGTGCT 20102 29 86.2 32 ...........A.........G..G...A GGGTGCTGGCGGCGCAGCCAGAGCATGTCCTC 20163 29 86.2 31 ..T..............A...G..T.... GGTGCTCCCCAGGAACGGTTCCCTTTATCTC 20223 29 86.2 32 ...T.................C.A....A ATCGCCTTAGAGGTCGCGACCGGCCAGCTCCT 20284 29 86.2 17 ...............C...GAT....... CCCACCAAACGGTCCGG Deletion [20330] 20330 29 93.1 32 .A.........C................. TGGTCCGGGTACGGCAGTATGCGGCCCCGGGT 20391 29 96.6 32 ..T.......................... TCCTCGGCCTTGGTACCGAACAGGGCGACCGC 20452 29 82.8 34 ..T.........CGT.............C CGCACCGCATGGCCGTCGTCTGCATTGCCCGCAA 20515 28 86.2 30 ..T.........CT..-............ CTGAAGGCTGGGAACACAGCCGACCTTGGC 20573 29 93.1 32 .......T....................A TGGGGCGCGACCTACATCGGTTGGACGCCGCC 20634 29 86.2 32 C.T........A..............T.. TTCGGTGCCACTCCAGAGGACCGGGCCCGGCT 20695 29 86.2 108 ...........A....T....G..T.... ATGACCCCCGCGTGGGAGGTCAGGTACCAAAGTCCGGTCCAAGTACGCGGAGCTCCGCGCACGCGGAGATGTTCCGTGGATGGGTGGCGGCATCGCGGCCATCCTCCT 20832 29 93.1 32 ...........A.T............... CTCGACGACGCCATCATCGCGCGCACCAAGGC 20893 29 89.7 32 ..A..........G.A............. GTGGTCGCCATGCCTGAAGTGCACGTCTTGAC 20954 29 93.1 32 ........................TG... CAGCGCTCCGACGTCGAGCCGGTGATCCCGTA 21015 29 89.7 31 .................T..AT....... ACCCGTAAGCAGCCCGGCACCTCAAGGCGCA 21075 29 100.0 32 ............................. CGGATGTGCCTGGTCTACTGCGCCTACGGCTA 21136 29 86.2 32 A..........A...........A....A GACCCCGAGTTCGTCACCGTGGACTACTCCGG 21197 29 86.2 31 A...........A........G.T..... GACCCCCGCGGCGTCGTAGCCTGCTGCCCGC 21257 29 89.7 32 A.T...................C...... GAGGAATCATCATGGGCACCGCCGAGAAGATC 21318 29 100.0 32 ............................. GGTCAGCGCCACATAGACCACGCCTCGGCAAT 21379 27 89.7 32 ........A........--.......... ATCACCGGATCCCGGGCGATCAGGCTGACCCC 21438 29 89.7 33 ....A......C.............C... TTGCCCAGGGGCCTTCGACTGCGTGCCGAGCAA 21500 28 93.1 32 A....................-....... TTTACGACGTGCCCGTGACGGCCGGTGCCGTC 21560 29 96.6 32 ...T......................... GTCGACATCTCCAACTGGACATCGCAGCTGGA 21621 29 89.7 32 ....................T...T.T.. TGGTGCGCGACCTACATCGGTTGGACGCCGCC 21682 29 79.3 32 C.T........A.........G..T...A GGGTGCGGATAGCGCAGCCAGAGGATCTCCTC 21743 29 79.3 32 ..TG........C.G......G......A CAGGCAGTGACGATCCCCTCCGCGAACTCATG 21804 29 86.2 31 ..T..........G.........A....A GGGGTGCGGCCGACTTCGATCCGAACCAGAT 21865 29 89.7 32 A..T....................T.... TACTGGACAAAAGTTCAGCACACGGGTCCTGG 21926 29 89.7 31 ...T..........T............A. CTGTCGAAAACCCCGGGATTGAGCGGGGTGG 21987 28 82.8 32 A..T..-...T.C................ CCGGAGGAGGTGTAGGACCTCCTGTGGAGGCC 22047 29 96.6 32 .......T..................... ACGAAGAACAGGCAGCCGGGAACAGCGGGCGG 22108 29 79.3 32 ..........A....AT.......T.T.A ACCGCCGGTGGCGGAGTCGGTCAGGTCATCAT 22169 29 93.1 31 ...T....................T.... TCGTACACATCTAGGGCCTCGCGGATAGGCT 22229 29 89.7 31 .GT.........C................ AGATCCCCGGCGTATGGCAGGAACAGGTCGA T [22233] 22291 29 89.7 32 C.T....T..................... GACGCGAAGCTCCGCCAGTCGGGCAACCGGCT 22352 28 79.3 32 .............G-........ATC..A GCGTTCTACCGGTAGCGCGCTATTAAGGCCGG 22412 29 79.3 32 ..T..T.G.A..............TC... ATGAACGGCAGTTGTACGCGATAGCGGTTCAA 22473 29 82.8 32 ..T....A...A..G.........T.... TACGACACGGCCGTCCGTGAGCATGGGGCCGC 22534 29 89.7 32 .C.T....................T.... ATCTTGGTGTCGTCCGCCATGGCCTGAAGGGC 22595 29 86.2 81 ...T...........C.......CT.... TACTTGTGCTGCTCACGGCTGCCGTAGGCGTGTACGCGAAGATATCCCGCCGTGGGTGCAGCGATCGTACGGGCACGCGCT 22705 29 86.2 32 ...........A.........G..G...A GGGTGCGGGTAGCGCAGCCAGAGGATCTCCTC 22766 29 82.8 30 ..TG.........G.......G..T.... GCGAACTGACTGCAGCGCCACGAAGGCCAG 22825 29 79.3 32 C.T....G..........C.....TC... ATGAACGGCAGCCGCACGCGGTACCAGTTCAG 22886 29 89.7 32 ..T........C............T.... ATGGTGATTCCTGTCGCGATGCTCGTCCTGAT 22947 29 79.3 31 ..T..GC....A.........G......C TTGCCTACCGTCCATCAGGTTCCACCAATAC 23007 29 86.2 32 .GTT......................G.. TGCGTCTACTCCCTGGCGAAGAAGGGCCTGCA 23068 29 93.1 32 ........................T..T. GAGTCCGGCACGTGCGGCGACGTGTGCATCCT 23129 29 93.1 32 ...T....................T.... GCGCTGGGCATCGCCTCGCCGTCCAAGGTCAT 23190 29 93.1 32 ...TA........................ ACGAAGAACAGGCCGCCGGGGGCCAGAGGCGG 23251 29 75.9 32 ..........A..CGAT.......T.T.. ACGGTCGTGCACTGGGTGCCGATCACCCGCCA 23312 29 89.7 32 ..........T.........A...T.... ACGGACGGGTGCGCCTGGTACATAGTTGCCCA 23373 28 82.8 32 .C..A........-G.............C AACGGCAAGTCCACGCTGGGCGGCGGCATCGC 23433 29 96.6 32 .......................A..... GACCCCGAGTTCGTCGCCGTGGACTACTCAGG 23494 29 93.1 32 A.............T.............. TTCCGACCTGACTTGGCGTCAAAGATCAGTCG 23555 29 89.7 32 ....A........G..........T.... ACGCCGAGGAACTGCGGGTCCGGCGTCAGGAA 23616 29 86.2 28 ..........T.C...........T.T.. GTCTCGCCGGACATCGCGCGGGAGCTGG 23673 29 75.9 32 CGTG........C.G.........T.... CCGTGCATGTCGTCCTCGACGTACACGCCCGG 23734 29 89.7 0 ..T..................G..T.... | ========== ====== ====== ====== ============================= ============================================================================================================ ================== 107 29 88.0 34 GTCCGCTCCGCGTACGCGGAGATGCTCCG # Left flank : GGGCTCGCGGTCCGCGCCTGCCAGGCCGGCCACCGCGTCGCCTTCGCCACCGCCGCCGAGTGGGTCGACCGCCTGGCCGCCGCCCACCACACCGGACGGCTCCAGAGCGAACTCACCAAACTGAGCCGTTATCCGCTGATCGTGATCGACGAGGTCGGCTACATCCCCTTCGAAGCCGAGGCCGCGAACCTGTTCTTCCAGCTCATCTCCAACAGATACGAACGCGCGTCCGTGATCGTCACCAGCAACAAACCCTTCGGACGCTGGGGAGAGGTCTTCGGCGACGAGACCGTCGCAGCCGCCATGATCGACCGCCTCGTCCACCACGCCGAGGTCCACTCCCTCAAAGGCGACTCTTACCGCATGCGAGGACGCGAACTCGGACGCGTCCCCACCACCGACAACGACTGAAACGACCGAACCGAAGACACCCGGGTCAGATTTCACCTGTCCAGACTGGGTCCAGGTTCAGCCGCCGCCGACATGCCCCGGCGAAAGGC # Right flank : GCCAGCCACACCAAGCTGGATGGTCACACCCGAATGCCCCGGGAAGGGCTCAACCTCTCGTAGGTCCGCTTCATCGCGAGTGTGGAGGCCAAGGTCGAAGCCCGGCCCTCCGCAGCAGCAATCTTCGAGAGTCCACATAGCGGCTATCCGGCGAGCGCCAGGACGAGCGGGAGCACTTGGTCGGCTCCGGCTTGGCGCAGGAGGCGTGCGCCCACCGCGAGGGTCCAGCCGGAATCGGTGTAGTCATCGACGAGCAGAACCGGGCCAGGAGTGGCGGCCAAGGCGGCGGCGAGTCCGTCGGGAACGGTGAACGAGTCTGCGAGCGCGCGCAGCCGCTGGGCCGAATTGCTGCGGTGCGCGGTGTGCTCGTCGGCGTGCGGGGTGTAGACCAGGCTGCCCAGGAGCGGGAGCCGGCCGACCCTGGCCACTCCCTCGGCCAGGGAGCCGACCAGCTGCGGGCGTGTGCGGGAGGGCATGGCGACGACGCCGACGGGCCGGGC # Questionable array : NO Score: 4.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.40, 5:0, 6:0.25, 7:-0.17, 8:1, 9:0.04, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCTCCGCGTACGCGGAGATGCTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCGCTCCGCGCACGCGGAGATGTTCCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.60,-10.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [134-145] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //