Array 1 174416-171335 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWGE01000006.1 Klebsiella pneumoniae strain VRCO0059, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 174415 29 100.0 32 ............................. TTGACCTCGCCGCTTCCGGCGTCGCCTACAAA 174354 29 100.0 33 ............................. TGCATCAGGAGTGTTGGATACTCAATTCCAGGC 174292 29 100.0 32 ............................. CCTACAGTCACAGCAGGCGGCCAGCACGTGGG 174231 29 100.0 32 ............................. CTCCGGGCGAATTTCGCGCCCGTCTACCGTCG 174170 29 100.0 32 ............................. TCGGAGATCAGCACCGACCACCACAACACCCC 174109 29 100.0 32 ............................. CACCACCATCATTAACCCCTGAAGAAGTGGGA 174048 29 100.0 32 ............................. TGTTACTAACCCTTCATGTGTGATACTTTCTA 173987 29 100.0 32 ............................. ATTTCTTCACCTGCATAGAGCAGTTGCGCCAT 173926 29 100.0 32 ............................. GCACCGTGGCCGCTGGCGACGATTACAGGATA 173865 29 100.0 32 ............................. TAGAGAATGCAGCCCGCGTGAGATCCATTGTC 173804 29 100.0 32 ............................. TGACGACACCTGACTGGTGCAGCGCCCGGTCA 173743 29 100.0 32 ............................. GGCAAGACGCGCAAAAAGAAAAATCATTTCAG 173682 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 173621 29 100.0 32 ............................. TTGAGTGACAGAGAGATTGACCGCCTTGTTTT 173560 29 100.0 32 ............................. CGTTTAACGCAGTGCGAAAAATTACGACACCA 173499 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 173438 29 100.0 32 ............................. TTCAGCAGCGCGCTCGTCCCCCTCCTGTCGGA 173377 29 100.0 32 ............................. CTCTACTACGATAACGGATCCCACGCGGGCTG 173316 29 100.0 32 ............................. GCTGCCAGCCCATTCCGTAATTGCCTGTTTCA 173255 29 100.0 32 ............................. TTTCTGCAAATCGAGTTGCCAGCGCGCCACGC 173194 29 100.0 32 ............................. GTGGAAATCAATTTTTGTTTTGGCCAGCGCGC 173133 29 100.0 32 ............................. GCCTCCTCCCGTTACACGGACGGCATTGACCC 173072 29 100.0 32 ............................. AGATTGAGCCATATCTATCACCGCCTTCGCCA 173011 29 100.0 32 ............................. ACCGGGCATTAAATTTGGTCTTCTCGTCCACG 172950 29 100.0 32 ............................. GCTGGCCGGAGTGTCGGTCATCGCCAGCCCCA 172889 29 100.0 32 ............................. AACAAACCGATCGCTCGATCAATCGCGTTAAA 172828 29 100.0 32 ............................. ATAATACTGTATACATAAACAGTATTTGAGGG 172767 29 100.0 32 ............................. TGCTGCGCAGACAATGGTCGCTATTTTGAAAC 172706 29 100.0 32 ............................. CCGGGCGATCATGTCCGCACAGTCAAACGCTC 172645 29 100.0 32 ............................. ATGAGTTCGTTCTGCCTGATAACACCCGCCGC 172584 29 100.0 32 ............................. TATACCGGCAATCACTGACGTCAACTCAGAAG 172523 29 100.0 32 ............................. GTACCGAGGTCAATGACGCTAACGGCCTGCAC 172462 29 100.0 32 ............................. CGCGCGCGCTGATCCTGGAGGGATACCGGGAC 172401 29 100.0 32 ............................. CTGAGTTCGTGACGTTTACCTGCGGGGAAGAC 172340 29 100.0 32 ............................. ATCCAGAGCTGACGGCATTCACGTTTGACGGC 172279 29 100.0 32 ............................. AGCCGATGCCTACAGTCACAGCAGGCGGCCAG 172218 29 100.0 33 ............................. TGTATTTCTCGGTATCCGTGGAGCGGTTGCCCC 172156 29 100.0 32 ............................. GCGAACATCCCCGTATAGGTGCCGTCTCCGGT 172095 29 96.6 32 A............................ GAGCTGGCGGTGTTTTTCTGTCAGTAGACGAT 172034 29 100.0 32 ............................. CGCTCTTCTGGTTGATGTGGCATGCCTTATAG 171973 29 100.0 32 ............................. CTCAGCCTTCACCTGCTCTTCCAGTTGAGCCA 171912 29 100.0 32 ............................. ATATTGAGGGGGTCTAGCGAGACGTCTAAGTC 171851 29 100.0 32 ............................. CCTGACGAAGACTTCGTTCGCCTCATGCAAGG 171790 29 100.0 32 ............................. CCACTCAAAAAAGGTCGAAGCCAAAAGGTTAT 171729 29 100.0 32 ............................. GGGAGCTTTCATTTGATCAGGCATTTGAGCAG 171668 29 96.6 32 ..............T.............. AGCGGCCGTTACGTAACTTTTCACGTAACAGC 171607 29 100.0 32 ............................. ACACGTCGTTAGGTGTTCCGTACTGGGAGAAA 171546 29 100.0 32 ............................. CCAGGCGACCGTATCTGGGTGCGTGAAACGTG 171485 29 100.0 32 ............................. CCGCAAGCCGTATCAACGAATTACTGCTCGAA 171424 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 171363 29 79.3 0 ...........ATTC..........G..C | ========== ====== ====== ====== ============================= ================================= ================== 51 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //