Array 1 11-1542 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOBB01000019.1 Chitinophaga rupis strain DSM 21039, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 11 30 100.0 35 .............................. CTGGCGATAGTGCGTATTCCGCGTTGGGTACTTAC 76 30 100.0 36 .............................. GCGAGAATGCCAGTACACGTCATCGATTTCAATCAC 142 30 100.0 35 .............................. ATTAATACAGATAAGCTGGCTAAGCAAAACAGGCA 207 30 100.0 35 .............................. TTAGTAGACTGTATGCCGTTCAACGCGTTAATACC 272 30 96.7 34 .................A............ TGGAAAAATACAATGGTAGGATAGTATTTATCTA 336 30 100.0 36 .............................. TATACGGCGCTGATGATTGTATTCCCCCGTATTGTT 402 30 100.0 37 .............................. TGATTAGCTGTTGGTGATGGTGTAACGCAGGGTACCG 469 30 100.0 34 .............................. ATGTGGAAACGTTGCATTAAAGCAGGCGCAAACA 533 30 100.0 36 .............................. ATTGAACGGATAACGTATAAGGACGTACTGGATATT 599 30 96.7 34 ........C..................... CTGGTAGAACGTATCCGTATCTTATTTCGTAACT 663 30 96.7 34 ........C..................... TGCTTTTGCTTCTGCTCTTTAATGAAGATATCAA 727 30 100.0 36 .............................. AGATTGGAGCTACGGAGAAAGAAGGTAACCGCCCTT 793 30 100.0 36 .............................. GGTTCTCATCTCCCAATATAAGAGGCGTATTGCGCT 859 30 100.0 36 .............................. GATATAAACAGCGGCACTATCAGTAGGAATAATATT 925 30 100.0 36 .............................. GTAGTAATCAGGATACGGGCGGCACTTTCTTTTTGC 991 30 100.0 35 .............................. TTATCTCATGAAGCTAAGAATTAACATTATGACCA 1056 30 100.0 34 .............................. TCACAGGCAGCAATTACTTCCTGAGCACTGATAG 1120 30 96.7 36 ..........A................... ATGGATGCTGTGTGATGACGACAGCGGGCAGGGATA 1186 30 100.0 34 .............................. CTGGTGGCGGAAAGACGGTAACATTTGCTGGACT 1250 30 100.0 33 .............................. AAGCATTCAAAGATGCCGGCAGGAGTATCGAAA 1313 30 100.0 36 .............................. AGGACTTTTCACACATGGAAGTTAAAGACGTAAAAG 1379 30 93.3 36 ................CA............ TGCGCAAGGAACTCGCATGCCTGCTTTACTATGCCA 1445 30 90.0 37 ................CA...........G GGATTACCAACGTGCATTCAAGAGATGGCGGCAGTGC 1512 30 80.0 0 ......C.....T...C.....T.A.C... | A [1536] ========== ====== ====== ====== ============================== ===================================== ================== 24 30 97.9 35 GTATTAATTGTACTATGGTAGAATGGTAAC # Left flank : CTCTTTTAAAG # Right flank : CCGTTAACGCAACATGATGATGTAAATACCTGGGCTGTTCTGCTTCTTTGATAAGGTAATCTGCTACATCTGCTCTGGAGATCTTGTTTATTTTTACGCCTTTAAATAAGTTACTTATCGCCTTGTAGTTTGATGTTAGTGGCCCATTTGTTAACATTCCAGGTTTCACAAACTCCCAGTTCATAGGGCTTTCAGCGATTATTTCTTCCAAGCGGGTCTTGTCCTTATACTGATCTTTTAAAAAAAGATTGATGACAAGGCGCAGAAAAAAAGTTAAATAACGGGCGCTTTCGCCGGTACCGAAGCCGGTGACTATAATCACTGGTCCCTTGTAATCCAACTCGGATGTGACCATTGATAGGGTTTTGGCCAGGTTGGAAAACAAGGTCGTGCCTTTTTTCTTTTTAGTCCCAACGGTCACGATCACTGCGTCCGTCCCGGCAATAGCTTTTTTAAGATCGTCCGCCGATAACGCAGTACCGGTGATCTTGGTTAAAGAC # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTGTACTATGGTAGAATGGTAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [13.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //