Array 1 75111-71899 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEDH01000008.1 Acinetobacter baumannii strain 440 Contig_16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 75110 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 75050 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 74990 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 74930 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 74870 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 74810 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 74750 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 74690 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 74630 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 74570 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 74510 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 74450 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 74390 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 74330 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 74270 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 74210 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 74150 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 74090 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 74030 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 73970 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 73910 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 73850 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 73790 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 73730 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 73670 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 73610 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 73550 30 100.0 29 .............................. TTTTCTGTTAACTCTAAAATACCCTTCCG 73490 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 73430 30 100.0 29 .............................. GTCTGATCCGACAATTTGGCTGAGTACGT 73370 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 73310 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 73250 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 73190 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 73130 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 73070 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 73010 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 72950 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 72889 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 72829 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 72769 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 72709 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 72649 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 72589 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 72529 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 72469 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 72408 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 72348 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 72288 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 72228 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 72168 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 72108 30 90.0 29 .......A.....C...T............ GGCGTACGGATAACGGAAGAAAGCATAAG 72048 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 71988 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 71928 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.7 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.40 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.35, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //